Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:40:53 (8099): wrapper (7.7.26015): starting
03:40:53 (8099): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:40:53] Arguments: --nthreads 8
[2025-06-04 03:40:53] Threads: 8
[2025-06-04 03:40:53] Checking for CVMFS
[2025-06-04 03:40:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:40:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:40:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:40:53] 2.11.2.0 2893 35347 79880 146772 1 56 18363076 20275201 1 130560 0 11433928 99.976 6171105 7580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:40:53] CVMFS is ok
[2025-06-04 03:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:40:53] Further information can be found at the LHC@home message board.
[2025-06-04 03:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:40:53] Checking for apptainer binary...
[2025-06-04 03:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:40:53] Running /usr/bin/apptainer --version
[2025-06-04 03:40:53] apptainer version 1.3.2-1.el7
[2025-06-04 03:40:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:40:55] c-115-6.aglt2.org
[2025-06-04 03:40:55] apptainer works
[2025-06-04 03:40:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:40:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:40:55] Starting ATLAS job with PandaID=6678363247
[2025-06-04 03:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:22:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:22:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:22:15]  replicas=None
[2025-06-04 05:22:15]  scope=mc23_13p6TeV
[2025-06-04 05:22:15]  status=None
[2025-06-04 05:22:15]  status_code=0
[2025-06-04 05:22:15]  storage_token=
[2025-06-04 05:22:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678363247/log.45006595._053287.job.log.tgz.1
[2025-06-04 05:22:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/d6/log.45006595._053287.job.log.tgz.1
[2025-06-04 05:22:15]  workdir=None
[2025-06-04 05:22:15] ]
[2025-06-04 05:22:15] 2025-06-04 09:21:43,367 | INFO     | transferring file log.45006595._053287.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678363247/log.45006595._053287.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:22:15] 2025-06-04 09:21:43,367 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678363247/log.45006595._053287.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053287.job
[2025-06-04 05:22:15] 2025-06-04 09:21:43,393 | INFO     | adding to output.list: log.45006595._053287.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/d6/log.45006595._053287.job.log.tg
[2025-06-04 05:22:15] 2025-06-04 09:21:43,394 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:22:15] 2025-06-04 09:21:43,394 | INFO     | summary of transferred files:
[2025-06-04 05:22:15] 2025-06-04 09:21:43,394 | INFO     |  -- lfn=log.45006595._053287.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:22:15] 2025-06-04 09:21:43,395 | INFO     | stage-out finished correctly
[2025-06-04 05:22:15] 2025-06-04 09:21:44,640 | INFO     | monitor loop #448: job 0:6678363247 is in state 'finished'
[2025-06-04 05:22:15] 2025-06-04 09:21:44,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:22:15] 2025-06-04 09:21:46,503 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:22:15] 2025-06-04 09:21:47,144 | INFO     | monitor loop #449: job 0:6678363247 is in state 'finished'
[2025-06-04 05:22:15] 2025-06-04 09:21:47,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:22:15] 2025-06-04 09:21:49,080 | INFO     | job 6678363247 has state=finished
[2025-06-04 05:22:15] 2025-06-04 09:21:49,080 | INFO     | preparing for final server update for job 6678363247 in state='finished'
[2025-06-04 05:22:15] 2025-06-04 09:21:49,081 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:22:15] 2025-06-04 09:21:49,081 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:22:15] 2025-06-04 09:21:49,081 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:22:15] 2025-06-04 09:21:49,082 | INFO     | job 6678363247 has finished - writing final server update
[2025-06-04 05:22:15] 2025-06-04 09:21:49,082 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:22:15] 2025-06-04 09:21:49,084 | INFO     | executing command: lscpu
[2025-06-04 05:22:15] 2025-06-04 09:21:49,113 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:22:15] 2025-06-04 09:21:49,648 | INFO     | monitor loop #450: job 0:6678363247 is in state 'finished'
[2025-06-04 05:22:15] 2025-06-04 09:21:49,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:22:15] 2025-06-04 09:21:51,798 | INFO     | PID=11959 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:22:15] 2025-06-04 09:21:52,151 | INFO     | monitor loop #451: job 0:6678363247 is in state 'finished'
[2025-06-04 05:22:15] 2025-06-04 09:21:52,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:22:15] 2025-06-04 09:21:54,654 | INFO     | monitor loop #452: job 0:6678363247 is in state 'finished'
[2025-06-04 05:22:15] 2025-06-04 09:21:54,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:22:15] 2025-06-04 09:21:55,014 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 05:22:15] 2025-06-04 09:21:55,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678363247/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:22:15] 2025-06-04 09:21:55,016 | INFO     | extracted standard info from prmon json
[2025-06-04 05:22:15] 2025-06-04 09:21:55,016 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:22:15] 2025-06-04 09:21:55,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:22:15] 2025-06-04 09:21:55,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:22:15] 2025-06-04 09:21:55,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:22:15] 2025-06-04 09:21:55,020 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:22:15] 2025-06-04 09:21:55,020 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 05:22:15] 2025-06-04 09:21:55,021 | INFO     | sum of deviations: -14273473081.999998
[2025-06-04 05:22:15] 2025-06-04 09:21:55,021 | INFO     | mean x: 1749025983.5
[2025-06-04 05:22:15] 2025-06-04 09:21:55,022 | INFO     | mean y: 2576734.434782609
[2025-06-04 05:22:15] 2025-06-04 09:21:55,022 | INFO     | -- intersect: 103406098294.56824
[2025-06-04 05:22:15] 2025-06-04 09:21:55,022 | INFO     | intersect: 103406098294.56824
[2025-06-04 05:22:15] 2025-06-04 09:21:55,022 | INFO     | chi2: 0.08857856745670835
[2025-06-04 05:22:15] 2025-06-04 09:21:55,022 | INFO     | -- intersect: 103406098294.56824
[2025-06-04 05:22:15] 2025-06-04 09:21:55,022 | INFO     | current memory leak: -59.12 B/s (using 92 data points, chi2=0.09)
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | ..............................
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . Timing measurements:
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . get job = 0 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . initial setup = 2 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . payload setup = 10 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . stage-in = 0 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . payload execution = 6001 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,023 | INFO     | . stage-out = 0 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,024 | INFO     | . log creation = 0 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,024 | INFO     | ..............................
[2025-06-04 05:22:15] 2025-06-04 09:21:55,107 | INFO     | 
[2025-06-04 05:22:15] 2025-06-04 09:21:55,107 | INFO     | job summary report
[2025-06-04 05:22:15] 2025-06-04 09:21:55,107 | INFO     | --------------------------------------------------
[2025-06-04 05:22:15] 2025-06-04 09:21:55,108 | INFO     | PanDA job id: 6678363247
[2025-06-04 05:22:15] 2025-06-04 09:21:55,108 | INFO     | task id: 45006595
[2025-06-04 05:22:15] 2025-06-04 09:21:55,108 | INFO     | errors: (none)
[2025-06-04 05:22:15] 2025-06-04 09:21:55,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:22:15] 2025-06-04 09:21:55,108 | INFO     | pilot state: finished 
[2025-06-04 05:22:15] 2025-06-04 09:21:55,108 | INFO     | transexitcode: 0
[2025-06-04 05:22:15] 2025-06-04 09:21:55,109 | INFO     | exeerrorcode: 0
[2025-06-04 05:22:15] 2025-06-04 09:21:55,109 | INFO     | exeerrordiag: 
[2025-06-04 05:22:15] 2025-06-04 09:21:55,109 | INFO     | exitcode: 0
[2025-06-04 05:22:15] 2025-06-04 09:21:55,109 | INFO     | exitmsg: OK
[2025-06-04 05:22:15] 2025-06-04 09:21:55,109 | INFO     | cpuconsumptiontime: 44598 s
[2025-06-04 05:22:15] 2025-06-04 09:21:55,110 | INFO     | nevents: 400
[2025-06-04 05:22:15] 2025-06-04 09:21:55,110 | INFO     | neventsw: 0
[2025-06-04 05:22:15] 2025-06-04 09:21:55,110 | INFO     | pid: 18371
[2025-06-04 05:22:15] 2025-06-04 09:21:55,110 | INFO     | pgrp: 18371
[2025-06-04 05:22:15] 2025-06-04 09:21:55,110 | INFO     | corecount: 8
[2025-06-04 05:22:15] 2025-06-04 09:21:55,110 | INFO     | event service: False
[2025-06-04 05:22:15] 2025-06-04 09:21:55,111 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 6016: 2432022, 6017: 2440963, 6020: 2441147, 6028: 2441317}
[2025-06-04 05:22:15] 2025-06-04 09:21:55,111 | INFO     | --------------------------------------------------
[2025-06-04 05:22:15] 2025-06-04 09:21:55,111 | INFO     | 
[2025-06-04 05:22:15] 2025-06-04 09:21:55,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:22:15] 2025-06-04 09:21:55,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:22:15] 2025-06-04 09:21:55,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:22:15] 2025-06-04 09:21:55,141 | INFO     | job 6678363247 has completed (purged errors)
[2025-06-04 05:22:15] 2025-06-04 09:21:55,141 | INFO     | overall cleanup function is called
[2025-06-04 05:22:15] 2025-06-04 09:21:56,149 | INFO     | --- collectZombieJob: --- 10, [18371]
[2025-06-04 05:22:15] 2025-06-04 09:21:56,149 | INFO     | zombie collector waiting for pid 18371
[2025-06-04 05:22:15] 2025-06-04 09:21:56,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:22:15] 2025-06-04 09:21:56,149 | INFO     | collected zombie processes
[2025-06-04 05:22:15] 2025-06-04 09:21:56,150 | INFO     | will attempt to kill all subprocesses of pid=18371
[2025-06-04 05:22:15] 2025-06-04 09:21:56,230 | INFO     | process IDs to be killed: [18371] (in reverse order)
[2025-06-04 05:22:15] 2025-06-04 09:21:56,286 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:22:15] 2025-06-04 09:21:56,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:22:15] 2025-06-04 09:21:56,291 | INFO     | did not find any defunct processes belonging to 18371
[2025-06-04 05:22:15] 2025-06-04 09:21:56,294 | INFO     | did not find any defunct processes belonging to 18371
[2025-06-04 05:22:15] 2025-06-04 09:21:56,294 | INFO     | ready for new job
[2025-06-04 05:22:15] 2025-06-04 09:21:56,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:22:15] 2025-06-04 09:21:56,295 | INFO     | **************************************
[2025-06-04 05:22:15] 2025-06-04 09:21:56,296 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:22:15] 2025-06-04 09:21:56,296 | INFO     | **************************************
[2025-06-04 05:22:15] 2025-06-04 09:21:56,296 | INFO     | 
[2025-06-04 05:22:15] 2025-06-04 09:21:56,296 | INFO     | architecture information:
[2025-06-04 05:22:15] 2025-06-04 09:21:56,297 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:22:15] 2025-06-04 09:21:56,317 | INFO     | cat /etc/os-release:
[2025-06-04 05:22:15] NAME="CentOS Linux"
[2025-06-04 05:22:15] VERSION="7 (Core)"
[2025-06-04 05:22:15] ID="centos"
[2025-06-04 05:22:15] ID_LIKE="rhel fedora"
[2025-06-04 05:22:15] VERSION_ID="7"
[2025-06-04 05:22:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:22:15] ANSI_COLOR="0;31"
[2025-06-04 05:22:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:22:15] HOME_URL="https://www.centos.org/"
[2025-06-04 05:22:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:22:15] 
[2025-06-04 05:22:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:22:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:22:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:22:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:22:15] 
[2025-06-04 05:22:15] 2025-06-04 09:21:56,317 | INFO     | **************************************
[2025-06-04 05:22:15] 2025-06-04 09:21:56,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:22:15] 2025-06-04 09:21:56,840 | INFO     | sufficient remaining disk space (18648924160 B)
[2025-06-04 05:22:15] 2025-06-04 09:21:56,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:22:15] 2025-06-04 09:21:56,841 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:22:15] 2025-06-04 09:21:56,841 | INFO     | update_server=False
[2025-06-04 05:22:15] 2025-06-04 09:21:56,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:22:15] 2025-06-04 09:21:56,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:22:15] 2025-06-04 09:21:56,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:22:15] 2025-06-04 09:21:57,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:22:15] 2025-06-04 09:21:57,157 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 05:22:15] 2025-06-04 09:21:57,158 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 05:22:15] 2025-06-04 09:21:57,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:22:15] 2025-06-04 09:21:57,158 | INFO     | will abort loop
[2025-06-04 05:22:15] 2025-06-04 09:21:57,183 | INFO     | all data control threads have been joined
[2025-06-04 05:22:15] 2025-06-04 09:21:57,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:22:15] 2025-06-04 09:21:57,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:22:15] 2025-06-04 09:21:57,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:22:15] 2025-06-04 09:21:57,847 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:57,847 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:57,908 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,020 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,132 | INFO     | all job control threads have been joined
[2025-06-04 05:22:15] 2025-06-04 09:21:58,160 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,188 | INFO     | all payload control threads have been joined
[2025-06-04 05:22:15] 2025-06-04 09:21:58,189 | INFO     | [data] control thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,546 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,706 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,822 | INFO     | [job] validate thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,827 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,838 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:58,847 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:59,138 | INFO     | [job] control thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:21:59,193 | INFO     | [payload] control thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:22:01,101 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:22:06,934 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:22:15] 2025-06-04 09:22:07,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:22:15] 2025-06-04 09:22:09,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140207518553920)>', '<ExcThread(monitor, started 140207210862336)>']
[2025-06-04 05:22:15] 2025-06-04 09:22:09,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:22:15] 2025-06-04 09:22:09,859 | INFO     | [monitor] control thread has ended
[2025-06-04 05:22:15] 2025-06-04 09:22:14,796 | INFO     | all workflow threads have been joined
[2025-06-04 05:22:15] 2025-06-04 09:22:14,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:22:15] 2025-06-04 09:22:14,797 | INFO     | traces error code: 0
[2025-06-04 05:22:15] 2025-06-04 09:22:14,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:22:15] 2025-06-04 09:22:14,907 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:22:15] 2025-06-04 09:22:14,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:22:15] 2025-06-04 09:22:14,917 [wrapper] pilotpid: 11959
[2025-06-04 05:22:15] 2025-06-04 09:22:14,922 [wrapper] Pilot exit status: 0
[2025-06-04 05:22:15] 2025-06-04 09:22:14,940 [wrapper] pandaids: 6678363247
[2025-06-04 05:22:15] 2025-06-04 09:22:14,980 [wrapper] cleanup supervisor_pilot  7229 11960
[2025-06-04 05:22:15] 2025-06-04 09:22:14,985 [wrapper] Test setup, not cleaning
[2025-06-04 05:22:15] 2025-06-04 09:22:14,990 [wrapper] apfmon messages muted
[2025-06-04 05:22:15] 2025-06-04 09:22:14,994 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:22:15] 2025-06-04 09:22:14,999 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:22:15]  *** Error codes and diagnostics ***
[2025-06-04 05:22:15]     "exeErrorCode": 0,
[2025-06-04 05:22:15]     "exeErrorDiag": "",
[2025-06-04 05:22:15]     "pilotErrorCode": 0,
[2025-06-04 05:22:15]     "pilotErrorDiag": "",
[2025-06-04 05:22:15]  *** Listing of results directory ***
[2025-06-04 05:22:15] total 385424
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:19 queuedata.json
[2025-06-04 05:22:15] -rwx------ 1 boincer umatlas     37140 Jun  4 01:20 runpilot2-wrapper.sh
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:22:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:40 run_atlas
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:40 job.xml
[2025-06-04 05:22:15] -rw-r--r-- 2 boincer umatlas 215345923 Jun  4 03:40 EVNT.45006593._002133.pool.root.1
[2025-06-04 05:22:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:40 start_atlas.sh
[2025-06-04 05:22:15] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:40 shared
[2025-06-04 05:22:15] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 03:40 input.tar.gz
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:40 boinc_lockfile
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 03:40 pandaJob.out
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas    986745 Jun  4 03:41 agis_schedconf.cvmfs.json
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas   1603667 Jun  4 03:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:22:15] drwx------ 4 boincer umatlas      4096 Jun  4 03:41 pilot3
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 05:19 init_data.xml
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas 173754870 Jun  4 05:21 HITS.45006595._053287.pool.root.1
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:21 boinc_task_state.xml
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas        95 Jun  4 05:21 pilot_heartbeat.json
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas      1065 Jun  4 05:21 memory_monitor_summary.json
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas    307327 Jun  4 05:21 log.45006595._053287.job.log.tgz.1
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas      7754 Jun  4 05:21 heartbeat.json
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:22 boinc_mmap_file
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:22 wrapper_checkpoint.txt
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas      4611 Jun  4 05:22 pilotlog.txt
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas    561125 Jun  4 05:22 log.45006595._053287.job.log.1
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas       357 Jun  4 05:22 output.list
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:22 runtime_log
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas    890880 Jun  4 05:22 result.tar.gz
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 05:22 runtime_log.err
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas       657 Jun  4 05:22 Ia5NDmfjvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgMnKDm7mt38n.diag
[2025-06-04 05:22:15] -rw-r--r-- 1 boincer umatlas     21876 Jun  4 05:22 stderr.txt
[2025-06-04 05:22:15] HITS file was successfully produced:
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas 173754870 Jun  4 05:21 shared/HITS.pool.root.1
[2025-06-04 05:22:15]  *** Contents of shared directory: ***
[2025-06-04 05:22:15] total 381376
[2025-06-04 05:22:15] -rw-r--r-- 2 boincer umatlas 215345923 Jun  4 03:40 ATLAS.root_0
[2025-06-04 05:22:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:40 start_atlas.sh
[2025-06-04 05:22:15] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 03:40 input.tar.gz
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas 173754870 Jun  4 05:21 HITS.pool.root.1
[2025-06-04 05:22:15] -rw------- 1 boincer umatlas    890880 Jun  4 05:22 result.tar.gz
05:22:16 (8099): run_atlas exited; CPU time 44561.819277
05:22:16 (8099): called boinc_finish(0)

</stderr_txt>
]]>

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