Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:04 (20899): wrapper (7.7.26015): starting
03:38:04 (20899): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:38:04] Arguments: --nthreads 8
[2025-06-04 03:38:04] Threads: 8
[2025-06-04 03:38:04] Checking for CVMFS
[2025-06-04 03:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:38:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:38:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:38:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:38:05] 2.11.2.0 73730 10695 315240 146772 3 220 13584704 18432000 16860 130560 0 87197817 99.398 111927999 72335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:38:05] CVMFS is ok
[2025-06-04 03:38:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:38:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:38:05] Further information can be found at the LHC@home message board.
[2025-06-04 03:38:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:38:05] Checking for apptainer binary...
[2025-06-04 03:38:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:38:05] Running /usr/bin/apptainer --version
[2025-06-04 03:38:05] apptainer version 1.3.2-1.el7
[2025-06-04 03:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:38:07] c-212-10.aglt2.org
[2025-06-04 03:38:07] apptainer works
[2025-06-04 03:38:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:38:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:38:07] Starting ATLAS job with PandaID=6678286272
[2025-06-04 03:38:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:11:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:11:49] 2025-06-04 09:11:03,596 | INFO     |  -- lfn=log.45006595._051200.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:11:49] 2025-06-04 09:11:03,596 | INFO     | stage-out finished correctly
[2025-06-04 05:11:49] 2025-06-04 09:11:04,671 | INFO     | monitor loop #404: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:04,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:04,830 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:11:49] 2025-06-04 09:11:05,791 | INFO     | job 6678286272 has state=finished
[2025-06-04 05:11:49] 2025-06-04 09:11:05,791 | INFO     | preparing for final server update for job 6678286272 in state='finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:05,792 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:11:49] 2025-06-04 09:11:05,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:11:49] 2025-06-04 09:11:05,792 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:11:49] 2025-06-04 09:11:05,792 | INFO     | job 6678286272 has finished - writing final server update
[2025-06-04 05:11:49] 2025-06-04 09:11:05,792 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:11:49] 2025-06-04 09:11:05,801 | INFO     | executing command: lscpu
[2025-06-04 05:11:49] 2025-06-04 09:11:06,038 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:11:49] 2025-06-04 09:11:07,174 | INFO     | monitor loop #405: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:07,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:08,304 | INFO     | PID=29490 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:11:49] 2025-06-04 09:11:08,304 | INFO     | .. there are 18 such processes running
[2025-06-04 05:11:49] 2025-06-04 09:11:09,677 | INFO     | monitor loop #406: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:09,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:12,180 | INFO     | monitor loop #407: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:12,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:14,684 | INFO     | monitor loop #408: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:14,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:17,189 | INFO     | monitor loop #409: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:17,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:19,693 | INFO     | monitor loop #410: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:19,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:22,196 | INFO     | monitor loop #411: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:22,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:24,700 | INFO     | monitor loop #412: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:24,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:27,203 | INFO     | monitor loop #413: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:27,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:29,706 | INFO     | monitor loop #414: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:29,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:30,673 | INFO     | PID=29490 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:11:49] 2025-06-04 09:11:30,673 | INFO     | .. there are 17 such processes running
[2025-06-04 05:11:49] 2025-06-04 09:11:32,209 | INFO     | monitor loop #415: job 0:6678286272 is in state 'finished'
[2025-06-04 05:11:49] 2025-06-04 09:11:32,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:49] 2025-06-04 09:11:32,730 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:11:49] 2025-06-04 09:11:32,731 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678286272/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:11:49] 2025-06-04 09:11:32,731 | INFO     | extracted standard info from prmon json
[2025-06-04 05:11:49] 2025-06-04 09:11:32,732 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:11:49] 2025-06-04 09:11:32,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:11:49] 2025-06-04 09:11:32,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:11:49] 2025-06-04 09:11:32,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | sum of deviations: -2263828218.0000005
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | mean x: 1749025597.0
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | mean y: 2495250.325301205
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | -- intersect: 22337702137.02914
[2025-06-04 05:11:49] 2025-06-04 09:11:32,734 | INFO     | intersect: 22337702137.02914
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | chi2: 0.005456905083947284
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | -- intersect: 22337702137.02914
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | current memory leak: -12.77 B/s (using 83 data points, chi2=0.01)
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | ..............................
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . Timing measurements:
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . get job = 0 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . initial setup = 2 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . payload setup = 23 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . stage-in = 0 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . payload execution = 5485 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,735 | INFO     | . stage-out = 1 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,736 | INFO     | . log creation = 0 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,736 | INFO     | ..............................
[2025-06-04 05:11:49] 2025-06-04 09:11:32,826 | INFO     | 
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | job summary report
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | --------------------------------------------------
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | PanDA job id: 6678286272
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | task id: 45006595
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | errors: (none)
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | pilot state: finished 
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | transexitcode: 0
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | exeerrorcode: 0
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | exeerrordiag: 
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | exitcode: 0
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | exitmsg: OK
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | cpuconsumptiontime: 29104 s
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | nevents: 400
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | neventsw: 0
[2025-06-04 05:11:49] 2025-06-04 09:11:32,827 | INFO     | pid: 48371
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | pgrp: 48371
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | corecount: 8
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | event service: False
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | sizes: {0: 2405184, 11: 2405184, 21: 2405446, 5513: 2431923, 5515: 2440864, 5516: 2440920, 5544: 2441218}
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | --------------------------------------------------
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | 
[2025-06-04 05:11:49] 2025-06-04 09:11:32,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 05:11:49] 2025-06-04 09:11:32,947 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:11:49] 2025-06-04 09:11:32,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:11:49] 2025-06-04 09:11:32,950 | INFO     | job 6678286272 has completed (purged errors)
[2025-06-04 05:11:49] 2025-06-04 09:11:32,950 | INFO     | overall cleanup function is called
[2025-06-04 05:11:49] 2025-06-04 09:11:33,957 | INFO     | --- collectZombieJob: --- 10, [48371]
[2025-06-04 05:11:49] 2025-06-04 09:11:33,957 | INFO     | zombie collector waiting for pid 48371
[2025-06-04 05:11:49] 2025-06-04 09:11:33,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:11:49] 2025-06-04 09:11:33,958 | INFO     | collected zombie processes
[2025-06-04 05:11:49] 2025-06-04 09:11:33,958 | INFO     | will attempt to kill all subprocesses of pid=48371
[2025-06-04 05:11:49] 2025-06-04 09:11:34,195 | INFO     | process IDs to be killed: [48371] (in reverse order)
[2025-06-04 05:11:49] 2025-06-04 09:11:34,666 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:11:49] 2025-06-04 09:11:34,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:11:49] 2025-06-04 09:11:34,675 | INFO     | did not find any defunct processes belonging to 48371
[2025-06-04 05:11:49] 2025-06-04 09:11:34,683 | INFO     | did not find any defunct processes belonging to 48371
[2025-06-04 05:11:49] 2025-06-04 09:11:34,683 | INFO     | ready for new job
[2025-06-04 05:11:49] 2025-06-04 09:11:34,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:11:49] 2025-06-04 09:11:34,685 | INFO     | **************************************
[2025-06-04 05:11:49] 2025-06-04 09:11:34,685 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:11:49] 2025-06-04 09:11:34,685 | INFO     | **************************************
[2025-06-04 05:11:49] 2025-06-04 09:11:34,685 | INFO     | 
[2025-06-04 05:11:49] 2025-06-04 09:11:34,689 | INFO     | architecture information:
[2025-06-04 05:11:49] 2025-06-04 09:11:34,690 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:11:49] 2025-06-04 09:11:34,750 | INFO     | cat /etc/os-release:
[2025-06-04 05:11:49] NAME="CentOS Linux"
[2025-06-04 05:11:49] VERSION="7 (Core)"
[2025-06-04 05:11:49] ID="centos"
[2025-06-04 05:11:49] ID_LIKE="rhel fedora"
[2025-06-04 05:11:49] VERSION_ID="7"
[2025-06-04 05:11:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:11:49] ANSI_COLOR="0;31"
[2025-06-04 05:11:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:11:49] HOME_URL="https://www.centos.org/"
[2025-06-04 05:11:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:11:49] 
[2025-06-04 05:11:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:11:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:11:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:11:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:11:49] 
[2025-06-04 05:11:49] 2025-06-04 09:11:34,751 | INFO     | **************************************
[2025-06-04 05:11:49] 2025-06-04 09:11:35,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 05:11:49] 2025-06-04 09:11:35,288 | INFO     | sufficient remaining disk space (103886618624 B)
[2025-06-04 05:11:49] 2025-06-04 09:11:35,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:11:49] 2025-06-04 09:11:35,288 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:11:49] 2025-06-04 09:11:35,288 | INFO     | update_server=False
[2025-06-04 05:11:49] 2025-06-04 09:11:35,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:11:49] 2025-06-04 09:11:35,288 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:11:49] 2025-06-04 09:11:35,289 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:11:49] 2025-06-04 09:11:35,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:11:49] 2025-06-04 09:11:35,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:11:49] 2025-06-04 09:11:35,364 | INFO     | all data control threads have been joined
[2025-06-04 05:11:49] 2025-06-04 09:11:35,481 | INFO     | all job control threads have been joined
[2025-06-04 05:11:49] 2025-06-04 09:11:35,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:11:49] 2025-06-04 09:11:35,751 | INFO     | aborting loop
[2025-06-04 05:11:49] 2025-06-04 09:11:35,825 | INFO     | all payload control threads have been joined
[2025-06-04 05:11:49] 2025-06-04 09:11:36,294 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,374 | INFO     | [data] control thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,486 | INFO     | [job] control thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,706 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:11:49] 2025-06-04 09:11:36,731 | INFO     | [job] validate thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,756 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,831 | INFO     | [payload] control thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:36,888 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:37,130 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:37,670 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:37,693 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:37,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:11:49] 2025-06-04 09:11:37,863 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:37,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:11:49] 2025-06-04 09:11:38,727 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:38,847 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:41,965 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:11:49] 2025-06-04 09:11:43,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211315541824)>', '<ExcThread(monitor, started 140210742486784)>']
[2025-06-04 05:11:49] 2025-06-04 09:11:44,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:11:49] 2025-06-04 09:11:44,341 | INFO     | [monitor] control thread has ended
[2025-06-04 05:11:49] 2025-06-04 09:11:48,674 | INFO     | all workflow threads have been joined
[2025-06-04 05:11:49] 2025-06-04 09:11:48,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:11:49] 2025-06-04 09:11:48,674 | INFO     | traces error code: 0
[2025-06-04 05:11:49] 2025-06-04 09:11:48,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:11:49] 2025-06-04 09:11:48,807 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:11:49] 2025-06-04 09:11:48,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:11:49] 2025-06-04 09:11:48,816 [wrapper] pilotpid: 29490
[2025-06-04 05:11:49] 2025-06-04 09:11:48,818 [wrapper] Pilot exit status: 0
[2025-06-04 05:11:49] 2025-06-04 09:11:48,834 [wrapper] pandaids: 6678286272
[2025-06-04 05:11:49] 2025-06-04 09:11:48,903 [wrapper] cleanup supervisor_pilot 59190 29491
[2025-06-04 05:11:49] 2025-06-04 09:11:48,906 [wrapper] Test setup, not cleaning
[2025-06-04 05:11:49] 2025-06-04 09:11:48,908 [wrapper] apfmon messages muted
[2025-06-04 05:11:49] 2025-06-04 09:11:48,910 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:11:49] 2025-06-04 09:11:48,929 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:11:49]  *** Error codes and diagnostics ***
[2025-06-04 05:11:49]     "exeErrorCode": 0,
[2025-06-04 05:11:49]     "exeErrorDiag": "",
[2025-06-04 05:11:49]     "pilotErrorCode": 0,
[2025-06-04 05:11:49]     "pilotErrorDiag": "",
[2025-06-04 05:11:49]  *** Listing of results directory ***
[2025-06-04 05:11:49] total 384396
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:04 queuedata.json
[2025-06-04 05:11:49] -rwx------ 1 boincer umatlas     37140 Jun  3 23:05 runpilot2-wrapper.sh
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:11:49] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:38 run_atlas
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:38 job.xml
[2025-06-04 05:11:49] -rw-r--r-- 2 boincer umatlas 213250004 Jun  4 03:38 EVNT.45006593._002051.pool.root.1
[2025-06-04 05:11:49] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:38 start_atlas.sh
[2025-06-04 05:11:49] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:38 shared
[2025-06-04 05:11:49] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 03:38 input.tar.gz
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:38 boinc_lockfile
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 03:38 pandaJob.out
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas    986745 Jun  4 03:38 agis_schedconf.cvmfs.json
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas   1603667 Jun  4 03:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:11:49] drwx------ 4 boincer umatlas      4096 Jun  4 03:38 pilot3
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 05:10 init_data.xml
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas 174832749 Jun  4 05:10 HITS.45006595._051200.pool.root.1
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:10 boinc_task_state.xml
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas      1072 Jun  4 05:10 memory_monitor_summary.json
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas    325147 Jun  4 05:11 log.45006595._051200.job.log.tgz.1
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas        95 Jun  4 05:11 pilot_heartbeat.json
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas      7743 Jun  4 05:11 heartbeat.json
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:11 wrapper_checkpoint.txt
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:11 boinc_mmap_file
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas      4477 Jun  4 05:11 pilotlog.txt
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas    528751 Jun  4 05:11 log.45006595._051200.job.log.1
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas       357 Jun  4 05:11 output.list
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:11 runtime_log
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas    870400 Jun  4 05:11 result.tar.gz
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 05:11 runtime_log.err
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas       659 Jun  4 05:11 ldcLDmNctg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxzmKDmVhlMOm.diag
[2025-06-04 05:11:49] -rw-r--r-- 1 boincer umatlas     22331 Jun  4 05:11 stderr.txt
[2025-06-04 05:11:49] HITS file was successfully produced:
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas 174832749 Jun  4 05:10 shared/HITS.pool.root.1
[2025-06-04 05:11:49]  *** Contents of shared directory: ***
[2025-06-04 05:11:49] total 380360
[2025-06-04 05:11:49] -rw-r--r-- 2 boincer umatlas 213250004 Jun  4 03:38 ATLAS.root_0
[2025-06-04 05:11:49] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:38 start_atlas.sh
[2025-06-04 05:11:49] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 03:38 input.tar.gz
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas 174832749 Jun  4 05:10 HITS.pool.root.1
[2025-06-04 05:11:49] -rw------- 1 boincer umatlas    870400 Jun  4 05:11 result.tar.gz
05:11:51 (20899): run_atlas exited; CPU time 28820.805411
05:11:51 (20899): called boinc_finish(0)

</stderr_txt>
]]>

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