Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:49:59 (2541099): wrapper (7.7.26015): starting
00:49:59 (2541099): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:49:59] Arguments: --nthreads 12
[2025-06-04 00:49:59] Threads: 12
[2025-06-04 00:49:59] Checking for CVMFS
[2025-06-04 00:49:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:49:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:49:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:49:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:49:59] 2.11.5.0 1479349 22946 228632 146772 2 441 34670077 45568000 21386 130560 0 231843682 99.811 138576403 22411 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 00:49:59] CVMFS is ok
[2025-06-04 00:49:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:49:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:49:59] Further information can be found at the LHC@home message board.
[2025-06-04 00:49:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:49:59] Checking for apptainer binary...
[2025-06-04 00:49:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:49:59] Running /usr/bin/apptainer --version
[2025-06-04 00:49:59] apptainer version 1.4.0-1.el9
[2025-06-04 00:49:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:50:00] wns0029.triumf.lcg
[2025-06-04 00:50:00] apptainer works
[2025-06-04 00:50:00] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:50:00] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:50:00] Starting ATLAS job with PandaID=6678362534
[2025-06-04 00:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:53:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | found no stored workdir sizes
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | WARNING  | wrong length of table data, x=[1749023432.0], y=[25130.0] (must be same and length>=4)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | ..............................
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . Timing measurements:
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . get job = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . initial setup = 3 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . payload setup = 4 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . stage-in = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . payload execution = 15 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . stage-out = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . log creation = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | ..............................
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 00:53:01] 2025-06-04 07:52:47,134 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678362534/pilotlog.txt
[2025-06-04 00:53:01] 2025-06-04 07:52:47,143 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 00:53:01] - Log from pilotlog.txt -
[2025-06-04 00:53:01] 2025-06-04 07:52:47,131 | INFO     | extracted standard info from prmon json
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | found no stored workdir sizes
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | WARNING  | wrong length of table data, x=[1749023432.0], y=[25130.0] (must be same and length>=4)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | ..............................
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . Timing measurements:
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . get job = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . initial setup = 3 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . payload setup = 4 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . stage-in = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . payload execution = 15 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . stage-out = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . log creation = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | ..............................
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 00:53:01] 2025-06-04 07:52:47,134 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678362534/pilotlog.txt
[2025-06-04 00:53:01] 2025-06-04 07:52:47,144 | WARNING  | 
[2025-06-04 00:53:01] [begin log extracts]
[2025-06-04 00:53:01] - Log from pilotlog.txt -
[2025-06-04 00:53:01] 2025-06-04 07:52:47,131 | INFO     | extracted standard info from prmon json
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | WARNING  | found no stored workdir sizes
[2025-06-04 00:53:01] 2025-06-04 07:52:47,132 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | WARNING  | wrong length of table data, x=[1749023432.0], y=[25130.0] (must be same and length>=4)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | ..............................
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . Timing measurements:
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . get job = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . initial setup = 3 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . payload setup = 4 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . stage-in = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . payload execution = 15 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . stage-out = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | . log creation = 0 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | ..............................
[2025-06-04 00:53:01] 2025-06-04 07:52:47,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 00:53:01] 2025-06-04 07:52:47,134 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678362534/pilotlog.txt
[2025-06-04 00:53:01] [end log extracts]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,144 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,145 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | 
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | job summary report
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | --------------------------------------------------
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | PanDA job id: 6678362534
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | task id: 45006595
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 00:50:39,630 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | pilot state: failed 
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | transexitcode: 65
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | exeerrorcode: 65
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,413 | INFO     | exitcode: 65
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | cpuconsumptiontime: 17 s
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | nevents: 0
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | neventsw: 0
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | pid: 2558592
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | pgrp: 2558592
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | corecount: 12
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | event service: False
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | sizes: {0: 2405181, 3: 2405387, 11: 2405415, 23: 2428592, 24: 2432855, 143: 2432969}
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | --------------------------------------------------
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | 
[2025-06-04 00:53:01] 2025-06-04 07:52:47,414 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 00:53:01] 2025-06-04 07:52:47,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | job 6678362534 has completed (purged errors)
[2025-06-04 00:53:01] 2025-06-04 07:52:47,432 | INFO     | overall cleanup function is called
[2025-06-04 00:53:01] 2025-06-04 07:52:48,438 | INFO     | --- collectZombieJob: --- 10, [2558592]
[2025-06-04 00:53:01] 2025-06-04 07:52:48,438 | INFO     | zombie collector waiting for pid 2558592
[2025-06-04 00:53:01] 2025-06-04 07:52:48,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:53:01] 2025-06-04 07:52:48,439 | INFO     | collected zombie processes
[2025-06-04 00:53:01] 2025-06-04 07:52:48,439 | INFO     | will attempt to kill all subprocesses of pid=2558592
[2025-06-04 00:53:01] 2025-06-04 07:52:48,656 | INFO     | process IDs to be killed: [2558592] (in reverse order)
[2025-06-04 00:53:01] 2025-06-04 07:52:48,739 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:53:01] 2025-06-04 07:52:48,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:53:01] 2025-06-04 07:52:48,749 | INFO     | did not find any defunct processes belonging to 2558592
[2025-06-04 00:53:01] 2025-06-04 07:52:48,759 | INFO     | did not find any defunct processes belonging to 2558592
[2025-06-04 00:53:01] 2025-06-04 07:52:48,759 | INFO     | ready for new job
[2025-06-04 00:53:01] 2025-06-04 07:52:48,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:53:01] 2025-06-04 07:52:48,761 | INFO     | **************************************
[2025-06-04 00:53:01] 2025-06-04 07:52:48,761 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:53:01] 2025-06-04 07:52:48,761 | INFO     | **************************************
[2025-06-04 00:53:01] 2025-06-04 07:52:48,761 | INFO     | 
[2025-06-04 00:53:01] 2025-06-04 07:52:48,763 | INFO     | architecture information:
[2025-06-04 00:53:01] 2025-06-04 07:52:48,764 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:53:01] 2025-06-04 07:52:48,774 | INFO     | cat /etc/os-release:
[2025-06-04 00:53:01] NAME="CentOS Linux"
[2025-06-04 00:53:01] VERSION="7 (Core)"
[2025-06-04 00:53:01] ID="centos"
[2025-06-04 00:53:01] ID_LIKE="rhel fedora"
[2025-06-04 00:53:01] VERSION_ID="7"
[2025-06-04 00:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:53:01] ANSI_COLOR="0;31"
[2025-06-04 00:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:53:01] HOME_URL="https://www.centos.org/"
[2025-06-04 00:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:53:01] 
[2025-06-04 00:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:53:01] 
[2025-06-04 00:53:01] 2025-06-04 07:52:48,774 | INFO     | **************************************
[2025-06-04 00:53:01] 2025-06-04 07:52:49,277 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 00:53:01] 2025-06-04 07:52:49,292 | INFO     | sufficient remaining disk space (1797688131584 B)
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | INFO     | update_server=False
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:53:01] 2025-06-04 07:52:49,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:53:01] 2025-06-04 07:52:49,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:53:01] 2025-06-04 07:52:49,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:53:01] 2025-06-04 07:52:49,315 | INFO     | all data control threads have been joined
[2025-06-04 00:53:01] 2025-06-04 07:52:49,642 | INFO     | all job control threads have been joined
[2025-06-04 00:53:01] 2025-06-04 07:52:50,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:53:01] 2025-06-04 07:52:50,292 | INFO     | aborting loop
[2025-06-04 00:53:01] 2025-06-04 07:52:50,295 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:50,303 | INFO     | all payload control threads have been joined
[2025-06-04 00:53:01] 2025-06-04 07:52:50,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:50,321 | INFO     | [data] control thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:50,349 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:50,647 | INFO     | [job] control thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:50,775 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,294 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,296 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,308 | INFO     | [payload] control thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,430 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:53:01] 2025-06-04 07:52:51,454 | INFO     | [job] validate thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,590 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,750 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:51,755 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:52,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:53:01] 2025-06-04 07:52:53,222 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:55,447 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:53:01] 2025-06-04 07:52:56,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883434366784)>', '<ExcThread(monitor, started 139882890508032)>']
[2025-06-04 00:53:01] 2025-06-04 07:52:56,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:53:01] 2025-06-04 07:52:56,321 | INFO     | [monitor] control thread has ended
[2025-06-04 00:53:01] 2025-06-04 07:53:01,027 | INFO     | all workflow threads have been joined
[2025-06-04 00:53:01] 2025-06-04 07:53:01,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:53:01] 2025-06-04 07:53:01,028 | INFO     | traces error code: 0
[2025-06-04 00:53:01] 2025-06-04 07:53:01,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:53:01] 2025-06-04 07:53:01,155 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:53:01] 2025-06-04 07:53:01,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:53:01] 2025-06-04 07:53:01,160 [wrapper] pilotpid: 2551526
[2025-06-04 00:53:01] 2025-06-04 07:53:01,162 [wrapper] Pilot exit status: 0
[2025-06-04 00:53:01] 2025-06-04 07:53:01,170 [wrapper] pandaids: 6678362534
[2025-06-04 00:53:01] 2025-06-04 07:53:01,222 [wrapper] cleanup supervisor_pilot 2551537 2551527
[2025-06-04 00:53:01] 2025-06-04 07:53:01,224 [wrapper] Test setup, not cleaning
[2025-06-04 00:53:01] 2025-06-04 07:53:01,226 [wrapper] apfmon messages muted
[2025-06-04 00:53:01] 2025-06-04 07:53:01,229 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:53:01] 2025-06-04 07:53:01,231 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:53:01]  *** Error codes and diagnostics ***
[2025-06-04 00:53:01]     "exeErrorCode": 65,
[2025-06-04 00:53:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 00:53:01]     "pilotErrorCode": 1305,
[2025-06-04 00:53:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 00:53:01]  *** Listing of results directory ***
[2025-06-04 00:53:01] total 212676
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:58 pilot3.tar.gz
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:09 queuedata.json
[2025-06-04 00:53:01] -rwx------. 1 boinc boinc     37140 Jun  3 22:11 runpilot2-wrapper.sh
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:53:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:49 run_atlas
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:49 job.xml
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc      6600 Jun  4 00:49 init_data.xml
[2025-06-04 00:53:01] -rw-r--r--. 2 boinc boinc 213760797 Jun  4 00:49 EVNT.45006593._002122.pool.root.1
[2025-06-04 00:53:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:49 start_atlas.sh
[2025-06-04 00:53:01] drwxrwx--x. 2 boinc boinc      4096 Jun  4 00:49 shared
[2025-06-04 00:53:01] -rw-r--r--. 2 boinc boinc    508883 Jun  4 00:49 input.tar.gz
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:49 boinc_lockfile
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc      2525 Jun  4 00:50 pandaJob.out
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc    986745 Jun  4 00:50 agis_schedconf.cvmfs.json
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc   1603667 Jun  4 00:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:53:01] drwx------. 4 boinc boinc      4096 Jun  4 00:50 pilot3
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc       984 Jun  4 00:50 memory_monitor_summary.json
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc     19914 Jun  4 00:50 log.45006595._053029.job.log.tgz.1
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc        95 Jun  4 00:52 pilot_heartbeat.json
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc      8333 Jun  4 00:52 heartbeat.json
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc       523 Jun  4 00:52 boinc_task_state.xml
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc      8192 Jun  4 00:53 boinc_mmap_file
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc      4475 Jun  4 00:53 pilotlog.txt
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc        22 Jun  4 00:53 wrapper_checkpoint.txt
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc     72625 Jun  4 00:53 log.45006595._053029.job.log.1
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc       188 Jun  4 00:53 output.list
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc       620 Jun  4 00:53 runtime_log
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc    112640 Jun  4 00:53 result.tar.gz
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc      8484 Jun  4 00:53 runtime_log.err
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc       645 Jun  4 00:53 HPvMDmiavg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyjaKDmEnbqwn.diag
[2025-06-04 00:53:01] -rw-r--r--. 1 boinc boinc     21475 Jun  4 00:53 stderr.txt
[2025-06-04 00:53:01] No HITS result produced
[2025-06-04 00:53:01]  *** Contents of shared directory: ***
[2025-06-04 00:53:01] total 209384
[2025-06-04 00:53:01] -rw-r--r--. 2 boinc boinc 213760797 Jun  4 00:49 ATLAS.root_0
[2025-06-04 00:53:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:49 start_atlas.sh
[2025-06-04 00:53:01] -rw-r--r--. 2 boinc boinc    508883 Jun  4 00:49 input.tar.gz
[2025-06-04 00:53:01] -rw-------. 1 boinc boinc    112640 Jun  4 00:53 result.tar.gz
00:53:03 (2541099): run_atlas exited; CPU time 20.496336
00:53:03 (2541099): called boinc_finish(0)

</stderr_txt>
]]>

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