Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:33:12 (3850180): wrapper (7.7.26015): starting
16:33:12 (3850180): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:33:12] Arguments: --nthreads 4
[2025-06-05 16:33:12] Threads: 4
[2025-06-05 16:33:12] Checking for CVMFS
[2025-06-05 16:33:12] No cvmfs_config command found, will try listing directly
[2025-06-05 16:33:12] CVMFS is ok
[2025-06-05 16:33:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:33:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:33:12] Further information can be found at the LHC@home message board.
[2025-06-05 16:33:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:33:12] Checking for apptainer binary...
[2025-06-05 16:33:12] which: no apptainer in ((null))
[2025-06-05 16:33:12] apptainer is not installed, using version from CVMFS
[2025-06-05 16:33:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:33:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-05 16:33:12] apptainer works
[2025-06-05 16:33:12] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:33:12] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:33:12] Starting ATLAS job with PandaID=6678214435
[2025-06-05 16:33:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:32:46]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:32:46] 2025-06-05 16:31:55,673 | INFO     | monitor loop #504: job 0:6678214435 is in state 'finished'
[2025-06-05 18:32:46] 2025-06-05 16:31:55,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:32:46] 2025-06-05 16:31:58,176 | INFO     | monitor loop #505: job 0:6678214435 is in state 'finished'
[2025-06-05 18:32:46] 2025-06-05 16:31:58,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:32:46] 2025-06-05 16:31:59,459 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6678214435/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,460 | INFO     | extracted standard info from prmon json
[2025-06-05 18:32:46] 2025-06-05 16:31:59,460 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:32:46] 2025-06-05 16:31:59,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:32:46] 2025-06-05 16:31:59,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:32:46] 2025-06-05 16:31:59,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:32:46] 2025-06-05 16:31:59,463 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:32:46] 2025-06-05 16:31:59,463 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | sum of deviations: 12742225461.999998
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | mean x: 1749137542.5
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | mean y: 2309707.5517241377
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | -- intersect: -46049757659.18168
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | intersect: -46049757659.18168
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | chi2: 1.522625043686285
[2025-06-05 18:32:46] 2025-06-05 16:31:59,464 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,465 | INFO     | sum of deviations: 12220349173.000002
[2025-06-05 18:32:46] 2025-06-05 16:31:59,465 | INFO     | mean x: 1749137390.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,465 | INFO     | mean y: 2308378.5225225226
[2025-06-05 18:32:46] 2025-06-05 16:31:59,465 | INFO     | -- intersect: -50405222879.114944
[2025-06-05 18:32:46] 2025-06-05 16:31:59,465 | INFO     | intersect: -50405222879.114944
[2025-06-05 18:32:46] 2025-06-05 16:31:59,465 | INFO     | chi2: 1.5254437718464064
[2025-06-05 18:32:46] 2025-06-05 16:31:59,468 | INFO     | current chi2=1.5254437718464064 (change=-0.1851229343566661 %)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,468 | INFO     | right removable region: 110
[2025-06-05 18:32:46] 2025-06-05 16:31:59,468 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | sum of deviations: -3447243590.000001
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | mean x: 1749137695.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | mean y: 2350034.5585585586
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | -- intersect: 14221834834.51743
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | intersect: 14221834834.51743
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | chi2: 0.00481306827633181
[2025-06-05 18:32:46] 2025-06-05 16:31:59,469 | INFO     | current chi2=0.00481306827633181 (change=99.6838966824899 %)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | sum of deviations: -3068314640.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | mean x: 1749137847.5
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | mean y: 2348964.132075472
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | -- intersect: 14535726763.640963
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | intersect: 14535726763.640963
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | chi2: 0.004654387246553642
[2025-06-05 18:32:46] 2025-06-05 16:31:59,470 | INFO     | current chi2=0.004654387246553642 (change=3.2968788445923205 %)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | left removable region: 20
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | sum of square deviations: 226022842.5
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | sum of deviations: -1842802009.0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | mean x: 1749137969.5
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | mean y: 2345756.933333333
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | -- intersect: 14263359947.18174
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | intersect: 14263359947.18174
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | chi2: 0.004071076979471765
[2025-06-05 18:32:46] 2025-06-05 16:31:59,471 | INFO     | -- intersect: 14263359947.18174
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | current memory leak: -8.15 B/s (using 90 data points, chi2=0.00)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | ..............................
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . Timing measurements:
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . get job = 0 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . initial setup = 1 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . payload setup = 8 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . stage-in = 0 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . payload execution = 7076 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,472 | INFO     | . stage-out = 0 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,473 | INFO     | . log creation = 0 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,473 | INFO     | ..............................
[2025-06-05 18:32:46] 2025-06-05 16:31:59,554 | INFO     | 
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | job summary report
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | --------------------------------------------------
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | PanDA job id: 6678214435
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | task id: 45006595
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | errors: (none)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | pilot state: finished 
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | transexitcode: 0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | exeerrorcode: 0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | exeerrordiag: 
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | exitcode: 0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | exitmsg: OK
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | cpuconsumptiontime: 27324 s
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | nevents: 400
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | neventsw: 0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,555 | INFO     | pid: 3873196
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | pgrp: 3873196
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | corecount: 4
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | event service: False
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | sizes: {0: 2397182, 1: 2397381, 6: 2397587, 11: 2397615, 7088: 2424676, 7090: 2433641, 7093: 2433825, 7099: 2433995}
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | --------------------------------------------------
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | 
[2025-06-05 18:32:46] 2025-06-05 16:31:59,556 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-05 18:32:46] 2025-06-05 16:31:59,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | job 6678214435 has completed (purged errors)
[2025-06-05 18:32:46] 2025-06-05 16:31:59,579 | INFO     | overall cleanup function is called
[2025-06-05 18:32:46] 2025-06-05 16:32:00,587 | INFO     | --- collectZombieJob: --- 10, [3873196]
[2025-06-05 18:32:46] 2025-06-05 16:32:00,588 | INFO     | zombie collector waiting for pid 3873196
[2025-06-05 18:32:46] 2025-06-05 16:32:00,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:32:46] 2025-06-05 16:32:00,588 | INFO     | collected zombie processes
[2025-06-05 18:32:46] 2025-06-05 16:32:00,588 | INFO     | will attempt to kill all subprocesses of pid=3873196
[2025-06-05 18:32:46] 2025-06-05 16:32:01,467 | INFO     | process IDs to be killed: [3873196] (in reverse order)
[2025-06-05 18:32:46] 2025-06-05 16:32:01,673 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:32:46] 2025-06-05 16:32:01,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:32:46] 2025-06-05 16:32:01,771 | INFO     | did not find any defunct processes belonging to 3873196
[2025-06-05 18:32:46] 2025-06-05 16:32:01,836 | INFO     | did not find any defunct processes belonging to 3873196
[2025-06-05 18:32:46] 2025-06-05 16:32:01,837 | INFO     | ready for new job
[2025-06-05 18:32:46] 2025-06-05 16:32:01,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:32:46] 2025-06-05 16:32:01,839 | INFO     | **************************************
[2025-06-05 18:32:46] 2025-06-05 16:32:01,839 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:32:46] 2025-06-05 16:32:01,839 | INFO     | **************************************
[2025-06-05 18:32:46] 2025-06-05 16:32:01,839 | INFO     | 
[2025-06-05 18:32:46] 2025-06-05 16:32:01,849 | INFO     | architecture information:
[2025-06-05 18:32:46] 2025-06-05 16:32:01,849 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:32:46] 2025-06-05 16:32:01,870 | INFO     | cat /etc/os-release:
[2025-06-05 18:32:46] NAME="CentOS Linux"
[2025-06-05 18:32:46] VERSION="7 (Core)"
[2025-06-05 18:32:46] ID="centos"
[2025-06-05 18:32:46] ID_LIKE="rhel fedora"
[2025-06-05 18:32:46] VERSION_ID="7"
[2025-06-05 18:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:32:46] ANSI_COLOR="0;31"
[2025-06-05 18:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:32:46] HOME_URL="https://www.centos.org/"
[2025-06-05 18:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:32:46] 
[2025-06-05 18:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:32:46] 
[2025-06-05 18:32:46] 2025-06-05 16:32:01,870 | INFO     | **************************************
[2025-06-05 18:32:46] 2025-06-05 16:32:02,067 | INFO     | PID=3858094 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 18:32:46] 2025-06-05 16:32:02,068 | INFO     | .. there are 10 such processes running
[2025-06-05 18:32:46] 2025-06-05 16:32:02,372 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-05 18:32:46] 2025-06-05 16:32:02,392 | INFO     | sufficient remaining disk space (3251580698624 B)
[2025-06-05 18:32:46] 2025-06-05 16:32:02,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:32:46] 2025-06-05 16:32:02,393 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:32:46] 2025-06-05 16:32:02,393 | INFO     | update_server=False
[2025-06-05 18:32:46] 2025-06-05 16:32:02,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:32:46] 2025-06-05 16:32:02,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:32:46] 2025-06-05 16:32:02,394 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:32:46] 2025-06-05 16:32:02,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:32:46] 2025-06-05 16:32:02,395 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:32:46] 2025-06-05 16:32:02,395 | INFO     | aborting loop
[2025-06-05 18:32:46] 2025-06-05 16:32:02,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:32:46] 2025-06-05 16:32:02,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:32:46] 2025-06-05 16:32:02,448 | INFO     | all payload control threads have been joined
[2025-06-05 18:32:46] 2025-06-05 16:32:02,752 | INFO     | all job control threads have been joined
[2025-06-05 18:32:46] 2025-06-05 16:32:03,198 | INFO     | all data control threads have been joined
[2025-06-05 18:32:46] 2025-06-05 16:32:03,399 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,401 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,452 | INFO     | [payload] control thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,563 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,632 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,701 | INFO     | [job] validate thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,755 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,759 | INFO     | [job] control thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:03,784 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:04,199 | INFO     | [data] control thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:04,379 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:04,396 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:04,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:32:46] 2025-06-05 16:32:04,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:32:46] 2025-06-05 16:32:04,889 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:05,570 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:08,736 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:13,073 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:32:46] 2025-06-05 16:32:14,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:32:46] 2025-06-05 16:32:14,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22943684859712)>', '<ExcThread(monitor, started 22943243429632)>']
[2025-06-05 18:32:46] 2025-06-05 16:32:15,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:32:46] 2025-06-05 16:32:15,452 | INFO     | [monitor] control thread has ended
[2025-06-05 18:32:46] 2025-06-05 16:32:19,493 | INFO     | all workflow threads have been joined
[2025-06-05 18:32:46] 2025-06-05 16:32:19,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:32:46] 2025-06-05 16:32:19,493 | INFO     | traces error code: 0
[2025-06-05 18:32:46] 2025-06-05 16:32:19,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:32:46] 2025-06-05 16:32:19,637 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:32:46] 2025-06-05 16:32:19,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:32:46] 2025-06-05 16:32:19,643 [wrapper] pilotpid: 3858094
[2025-06-05 18:32:46] 2025-06-05 16:32:19,647 [wrapper] Pilot exit status: 0
[2025-06-05 18:32:46] 2025-06-05 16:32:19,658 [wrapper] pandaids: 6678214435
[2025-06-05 18:32:46] 2025-06-05 16:32:19,790 [wrapper] cleanup supervisor_pilot   13824 3858095
[2025-06-05 18:32:46] 2025-06-05 16:32:19,794 [wrapper] Test setup, not cleaning
[2025-06-05 18:32:46] 2025-06-05 16:32:19,798 [wrapper] apfmon messages muted
[2025-06-05 18:32:46] 2025-06-05 16:32:19,802 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:32:46] 2025-06-05 16:32:19,804 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:32:46]  *** Error codes and diagnostics ***
[2025-06-05 18:32:46]     "exeErrorCode": 0,
[2025-06-05 18:32:46]     "exeErrorDiag": "",
[2025-06-05 18:32:46]     "pilotErrorCode": 0,
[2025-06-05 18:32:46]     "pilotErrorDiag": "",
[2025-06-05 18:32:46]  *** Listing of results directory ***
[2025-06-05 18:32:46] total 394724
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:32 queuedata.json
[2025-06-05 18:32:46] -rwx------ 1 boinc boinc     37140 Jun  4 02:34 runpilot2-wrapper.sh
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc       100 Jun  5 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:32:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 16:33 run_atlas
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc       105 Jun  5 16:33 job.xml
[2025-06-05 18:32:46] -rw-r--r-- 2 boinc boinc 216197373 Jun  5 16:33 EVNT.45006593._001963.pool.root.1
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc      6686 Jun  5 16:33 init_data.xml
[2025-06-05 18:32:46] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:33 start_atlas.sh
[2025-06-05 18:32:46] drwxrwx--x 2 boinc boinc      4096 Jun  5 16:33 shared
[2025-06-05 18:32:46] -rw-r--r-- 2 boinc boinc    508883 Jun  5 16:33 input.tar.gz
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc         0 Jun  5 16:33 boinc_lockfile
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc      2524 Jun  5 16:33 pandaJob.out
[2025-06-05 18:32:46] -rw------- 1 boinc boinc    983210 Jun  5 16:33 agis_schedconf.cvmfs.json
[2025-06-05 18:32:46] -rw------- 1 boinc boinc   1598969 Jun  5 16:33 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:32:46] drwx------ 4 boinc boinc      4096 Jun  5 16:33 pilot3
[2025-06-05 18:32:46] -rw------- 1 boinc boinc 182262154 Jun  5 18:31 HITS.45006595._048950.pool.root.1
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc       529 Jun  5 18:31 boinc_task_state.xml
[2025-06-05 18:32:46] -rw------- 1 boinc boinc      1031 Jun  5 18:31 memory_monitor_summary.json
[2025-06-05 18:32:46] -rw------- 1 boinc boinc    278978 Jun  5 18:31 log.45006595._048950.job.log.tgz.1
[2025-06-05 18:32:46] -rw------- 1 boinc boinc      7702 Jun  5 18:31 heartbeat.json
[2025-06-05 18:32:46] -rw------- 1 boinc boinc        95 Jun  5 18:32 pilot_heartbeat.json
[2025-06-05 18:32:46] -rw------- 1 boinc boinc      4956 Jun  5 18:32 pilotlog.txt
[2025-06-05 18:32:46] -rw------- 1 boinc boinc    671609 Jun  5 18:32 log.45006595._048950.job.log.1
[2025-06-05 18:32:46] -rw------- 1 boinc boinc       357 Jun  5 18:32 output.list
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc       620 Jun  5 18:32 runtime_log
[2025-06-05 18:32:46] -rw------- 1 boinc boinc    972800 Jun  5 18:32 result.tar.gz
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc      9040 Jun  5 18:32 runtime_log.err
[2025-06-05 18:32:46] -rw------- 1 boinc boinc       662 Jun  5 18:32 NmFKDmVGrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBMaKDmPEToqn.diag
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc        27 Jun  5 18:32 wrapper_checkpoint.txt
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc      8192 Jun  5 18:32 boinc_mmap_file
[2025-06-05 18:32:46] -rw-r--r-- 1 boinc boinc     20937 Jun  5 18:32 stderr.txt
[2025-06-05 18:32:46] HITS file was successfully produced:
[2025-06-05 18:32:46] -rw------- 1 boinc boinc 182262154 Jun  5 18:31 shared/HITS.pool.root.1
[2025-06-05 18:32:46]  *** Contents of shared directory: ***
[2025-06-05 18:32:46] total 390600
[2025-06-05 18:32:46] -rw-r--r-- 2 boinc boinc 216197373 Jun  5 16:33 ATLAS.root_0
[2025-06-05 18:32:46] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:33 start_atlas.sh
[2025-06-05 18:32:46] -rw-r--r-- 2 boinc boinc    508883 Jun  5 16:33 input.tar.gz
[2025-06-05 18:32:46] -rw------- 1 boinc boinc 182262154 Jun  5 18:31 HITS.pool.root.1
[2025-06-05 18:32:46] -rw------- 1 boinc boinc    972800 Jun  5 18:32 result.tar.gz
18:32:47 (3850180): run_atlas exited; CPU time 27684.568127
18:32:47 (3850180): called boinc_finish(0)

</stderr_txt>
]]>

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