Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:55 (8682): wrapper (7.7.26015): starting
18:29:55 (8682): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:29:55] Arguments: --nthreads 8
[2025-06-04 18:29:55] Threads: 8
[2025-06-04 18:29:55] Checking for CVMFS
[2025-06-04 18:29:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:29:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:29:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:29:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:29:58] 2.11.2.0 14280 33449 96892 146788 2 16 19474957 25165825 3519 130560 0 17747312 99.793 17939382 1918 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:29:58] CVMFS is ok
[2025-06-04 18:29:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:29:58] Checking for apptainer binary...
[2025-06-04 18:29:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:29:58] Running /usr/bin/apptainer --version
[2025-06-04 18:29:58] apptainer version 1.3.2-1.el7
[2025-06-04 18:29:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:30:08] cg-vwn302.simple-grid.lan
[2025-06-04 18:30:08] apptainer works
[2025-06-04 18:30:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:30:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:30:08] Starting ATLAS job with PandaID=6678285492
[2025-06-04 18:30:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:36:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:36:06] 2025-06-04 20:20:51,846 | INFO     | extracted standard info from prmon json
[2025-06-04 22:36:06] 2025-06-04 20:20:51,846 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:36:06] 2025-06-04 20:20:51,847 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:36:06] 2025-06-04 20:20:51,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:36:06] 2025-06-04 20:20:51,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:36:06] 2025-06-04 20:20:51,852 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:36:06] 2025-06-04 20:20:51,853 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,854 | INFO     | sum of deviations: 83439968130.00002
[2025-06-04 22:36:06] 2025-06-04 20:20:51,855 | INFO     | mean x: 1749061837.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,855 | INFO     | mean y: 2421482.3302325583
[2025-06-04 22:36:06] 2025-06-04 20:20:51,855 | INFO     | -- intersect: -47355745567.834335
[2025-06-04 22:36:06] 2025-06-04 20:20:51,855 | INFO     | intersect: -47355745567.834335
[2025-06-04 22:36:06] 2025-06-04 20:20:51,855 | INFO     | chi2: 8.103306463126598
[2025-06-04 22:36:06] 2025-06-04 20:20:51,856 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 22:36:06] 2025-06-04 20:20:51,857 | INFO     | sum of deviations: 95366919624.99998
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | mean x: 1749061684.5
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | mean y: 2429947.7523809522
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | -- intersect: -58084232177.35934
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | intersect: -58084232177.35934
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | chi2: 7.418179265257056
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | current chi2=7.418179265257056 (change=8.45490912860269 %)
[2025-06-04 22:36:06] 2025-06-04 20:20:51,858 | INFO     | right removable region: 209
[2025-06-04 22:36:06] 2025-06-04 20:20:51,859 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 22:36:06] 2025-06-04 20:20:51,860 | INFO     | sum of deviations: 8437625621.500002
[2025-06-04 22:36:06] 2025-06-04 20:20:51,861 | INFO     | mean x: 1749061989.5
[2025-06-04 22:36:06] 2025-06-04 20:20:51,861 | INFO     | mean y: 2475903.2333333334
[2025-06-04 22:36:06] 2025-06-04 20:20:51,861 | INFO     | -- intersect: -5136765208.958186
[2025-06-04 22:36:06] 2025-06-04 20:20:51,861 | INFO     | intersect: -5136765208.958186
[2025-06-04 22:36:06] 2025-06-04 20:20:51,861 | INFO     | chi2: 2.9567881691508697
[2025-06-04 22:36:06] 2025-06-04 20:20:51,862 | INFO     | current chi2=2.9567881691508697 (change=63.511337222583386 %)
[2025-06-04 22:36:06] 2025-06-04 20:20:51,862 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,864 | INFO     | sum of deviations: -36953091667.99999
[2025-06-04 22:36:06] 2025-06-04 20:20:51,864 | INFO     | mean x: 1749062142.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,864 | INFO     | mean y: 2510299.3609756096
[2025-06-04 22:36:06] 2025-06-04 20:20:51,864 | INFO     | -- intersect: 24197550399.003742
[2025-06-04 22:36:06] 2025-06-04 20:20:51,864 | INFO     | intersect: 24197550399.003742
[2025-06-04 22:36:06] 2025-06-04 20:20:51,865 | INFO     | chi2: 0.9738042112195162
[2025-06-04 22:36:06] 2025-06-04 20:20:51,865 | INFO     | current chi2=0.9738042112195162 (change=67.06547254958839 %)
[2025-06-04 22:36:06] 2025-06-04 20:20:51,865 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,867 | INFO     | sum of deviations: -36438933770.00001
[2025-06-04 22:36:06] 2025-06-04 20:20:51,867 | INFO     | mean x: 1749062294.5
[2025-06-04 22:36:06] 2025-06-04 20:20:51,867 | INFO     | mean y: 2509820.82
[2025-06-04 22:36:06] 2025-06-04 20:20:51,868 | INFO     | -- intersect: 25695425098.105217
[2025-06-04 22:36:06] 2025-06-04 20:20:51,868 | INFO     | intersect: 25695425098.105217
[2025-06-04 22:36:06] 2025-06-04 20:20:51,868 | INFO     | chi2: 0.9377807191942972
[2025-06-04 22:36:06] 2025-06-04 20:20:51,868 | INFO     | current chi2=0.9377807191942972 (change=3.6992540810750896 %)
[2025-06-04 22:36:06] 2025-06-04 20:20:51,868 | INFO     | left removable region: 30
[2025-06-04 22:36:06] 2025-06-04 20:20:51,869 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,870 | INFO     | sum of deviations: -2075772232.9999974
[2025-06-04 22:36:06] 2025-06-04 20:20:51,870 | INFO     | mean x: 1749062569.0
[2025-06-04 22:36:06] 2025-06-04 20:20:51,870 | INFO     | mean y: 2501909.5418994413
[2025-06-04 22:36:06] 2025-06-04 20:20:51,870 | INFO     | -- intersect: 2044056896.187419
[2025-06-04 22:36:06] 2025-06-04 20:20:51,871 | INFO     | intersect: 2044056896.187419
[2025-06-04 22:36:06] 2025-06-04 20:20:51,871 | INFO     | chi2: 0.04803346854186868
[2025-06-04 22:36:06] 2025-06-04 20:20:51,871 | INFO     | -- intersect: 2044056896.187419
[2025-06-04 22:36:06] 2025-06-04 20:20:51,871 | INFO     | current memory leak: -1.17 B/s (using 179 data points, chi2=0.05)
[2025-06-04 22:36:06] 2025-06-04 20:20:51,872 | INFO     | ..............................
[2025-06-04 22:36:06] 2025-06-04 20:20:51,872 | INFO     | . Timing measurements:
[2025-06-04 22:36:06] 2025-06-04 20:20:51,872 | INFO     | . get job = 0 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,872 | INFO     | . initial setup = 5 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,873 | INFO     | . payload setup = 185 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,873 | INFO     | . stage-in = 0 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,873 | INFO     | . payload execution = 13207 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,873 | INFO     | . stage-out = 3 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,873 | INFO     | . log creation = 0 s
[2025-06-04 22:36:06] 2025-06-04 20:20:51,873 | INFO     | ..............................
[2025-06-04 22:36:06] 2025-06-04 20:20:52,347 | INFO     | 
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | job summary report
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | --------------------------------------------------
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | PanDA job id: 6678285492
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | task id: 45006595
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | errors: (none)
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | pilot state: finished 
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | transexitcode: 0
[2025-06-04 22:36:06] 2025-06-04 20:20:52,348 | INFO     | exeerrorcode: 0
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | exeerrordiag: 
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | exitcode: 0
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | exitmsg: OK
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | cpuconsumptiontime: 49357 s
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | nevents: 400
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | neventsw: 0
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | pid: 21708
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | pgrp: 21708
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | corecount: 8
[2025-06-04 22:36:06] 2025-06-04 20:20:52,349 | INFO     | event service: False
[2025-06-04 22:36:06] 2025-06-04 20:20:52,350 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397398, 33: 2397426, 44: 2397482, 55: 2397638, 66: 2397666, 76: 2397694, 85: 2397956, 87: 2397984, 13396: 2427531
[2025-06-04 22:36:06] 2025-06-04 20:20:52,350 | INFO     | --------------------------------------------------
[2025-06-04 22:36:06] 2025-06-04 20:20:52,350 | INFO     | 
[2025-06-04 22:36:06] 2025-06-04 20:20:52,350 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 22:36:06] 2025-06-04 20:20:52,856 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:36:06] 2025-06-04 20:20:52,858 | INFO     | job 6678285492 has completed (purged errors)
[2025-06-04 22:36:06] 2025-06-04 20:20:52,859 | INFO     | overall cleanup function is called
[2025-06-04 22:36:06] 2025-06-04 20:20:53,867 | INFO     | --- collectZombieJob: --- 10, [21708]
[2025-06-04 22:36:06] 2025-06-04 20:20:53,868 | INFO     | zombie collector waiting for pid 21708
[2025-06-04 22:36:06] 2025-06-04 20:20:53,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:36:06] 2025-06-04 20:20:53,868 | INFO     | collected zombie processes
[2025-06-04 22:36:06] 2025-06-04 20:20:53,868 | INFO     | will attempt to kill all subprocesses of pid=21708
[2025-06-04 22:36:06] 2025-06-04 20:20:54,017 | INFO     | process IDs to be killed: [21708] (in reverse order)
[2025-06-04 22:36:06] 2025-06-04 20:20:54,726 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:36:06] 2025-06-04 20:20:54,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:36:06] 2025-06-04 20:20:54,730 | INFO     | did not find any defunct processes belonging to 21708
[2025-06-04 22:36:06] 2025-06-04 20:20:54,734 | INFO     | did not find any defunct processes belonging to 21708
[2025-06-04 22:36:06] 2025-06-04 20:20:54,734 | INFO     | ready for new job
[2025-06-04 22:36:06] 2025-06-04 20:20:54,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:36:06] 2025-06-04 20:20:54,736 | INFO     | **************************************
[2025-06-04 22:36:06] 2025-06-04 20:20:54,736 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:36:06] 2025-06-04 20:20:54,736 | INFO     | **************************************
[2025-06-04 22:36:06] 2025-06-04 20:20:54,737 | INFO     | 
[2025-06-04 22:36:06] 2025-06-04 20:20:54,737 | INFO     | pilot is running in a VM
[2025-06-04 22:36:06] 2025-06-04 20:20:54,737 | INFO     | architecture information:
[2025-06-04 22:36:06] 2025-06-04 20:20:54,751 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:36:06] 2025-06-04 20:20:54,957 | INFO     | cat /etc/os-release:
[2025-06-04 22:36:06] NAME="CentOS Linux"
[2025-06-04 22:36:06] VERSION="7 (Core)"
[2025-06-04 22:36:06] ID="centos"
[2025-06-04 22:36:06] ID_LIKE="rhel fedora"
[2025-06-04 22:36:06] VERSION_ID="7"
[2025-06-04 22:36:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:36:06] ANSI_COLOR="0;31"
[2025-06-04 22:36:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:36:06] HOME_URL="https://www.centos.org/"
[2025-06-04 22:36:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:36:06] 
[2025-06-04 22:36:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:36:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:36:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:36:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:36:06] 
[2025-06-04 22:36:06] 2025-06-04 20:20:54,957 | INFO     | **************************************
[2025-06-04 22:36:06] 2025-06-04 20:20:55,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 22:36:06] 2025-06-04 20:20:55,736 | INFO     | sufficient remaining disk space (497051238400 B)
[2025-06-04 22:36:06] 2025-06-04 20:20:55,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:36:06] 2025-06-04 20:20:55,737 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:36:06] 2025-06-04 20:20:55,737 | INFO     | update_server=False
[2025-06-04 22:36:06] 2025-06-04 20:20:55,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:36:06] 2025-06-04 20:20:55,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:36:06] 2025-06-04 20:20:55,738 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:36:06] 2025-06-04 20:20:55,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:36:06] 2025-06-04 20:20:55,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:36:06] 2025-06-04 20:20:55,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:36:06] 2025-06-04 20:20:55,741 | INFO     | aborting loop
[2025-06-04 22:36:06] 2025-06-04 20:20:56,051 | INFO     | all payload control threads have been joined
[2025-06-04 22:36:06] 2025-06-04 20:20:56,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:36:06] 2025-06-04 20:20:56,321 | INFO     | all data control threads have been joined
[2025-06-04 22:36:06] 2025-06-04 20:20:56,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:36:06] 2025-06-04 20:20:56,743 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:56,747 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:56,798 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:56,946 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:56,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:36:06] 2025-06-04 20:20:57,057 | INFO     | [payload] control thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,246 | INFO     | all job control threads have been joined
[2025-06-04 22:36:06] 2025-06-04 20:20:57,329 | INFO     | [data] control thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,330 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,331 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,374 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,496 | INFO     | [job] validate thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:57,919 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:58,039 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:58,252 | INFO     | [job] control thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:20:58,619 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:21:00,175 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:36:06] 2025-06-04 20:21:00,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084352075584)>', '<ExcThread(monitor, started 140083780908800)>']
[2025-06-04 22:36:06] 2025-06-04 20:21:01,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:36:06] 2025-06-04 20:21:01,773 | INFO     | [monitor] control thread has ended
[2025-06-04 22:36:06] 2025-06-04 20:21:05,991 | INFO     | all workflow threads have been joined
[2025-06-04 22:36:06] 2025-06-04 20:21:05,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:36:06] 2025-06-04 20:21:05,992 | INFO     | traces error code: 0
[2025-06-04 22:36:06] 2025-06-04 20:21:05,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:36:06] 2025-06-04 20:21:06,339 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:36:06] 2025-06-04 20:21:06,454 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:36:06] 2025-06-04 20:21:06,513 [wrapper] pilotpid: 13088
[2025-06-04 22:36:06] 2025-06-04 20:21:06,609 [wrapper] Pilot exit status: 0
[2025-06-04 22:36:06] 2025-06-04 20:21:07,052 [wrapper] pandaids: 6678285492
[2025-06-04 22:36:06] 2025-06-04 20:21:07,643 [wrapper] cleanup supervisor_pilot 29692 13089
[2025-06-04 22:36:06] 2025-06-04 20:21:07,771 [wrapper] Test setup, not cleaning
[2025-06-04 22:36:06] 2025-06-04 20:21:07,892 [wrapper] apfmon messages muted
[2025-06-04 22:36:06] 2025-06-04 20:21:08,026 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:36:06] 2025-06-04 20:21:08,104 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:36:06]  *** Error codes and diagnostics ***
[2025-06-04 22:36:06]     "exeErrorCode": 0,
[2025-06-04 22:36:06]     "exeErrorDiag": "",
[2025-06-04 22:36:06]     "pilotErrorCode": 0,
[2025-06-04 22:36:06]     "pilotErrorDiag": "",
[2025-06-04 22:36:06]  *** Listing of results directory ***
[2025-06-04 22:36:06] total 388768
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-04 22:36:06] -rwx------. 1 boinc boinc     37140 Jun  4 04:25 runpilot2-wrapper.sh
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:25 queuedata.json
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:36:06] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:29 run_atlas
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:29 job.xml
[2025-06-04 22:36:06] -rw-r--r--. 2 boinc boinc 214003248 Jun  4 18:29 EVNT.45006593._002031.pool.root.1
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc      6391 Jun  4 18:29 init_data.xml
[2025-06-04 22:36:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:29 start_atlas.sh
[2025-06-04 22:36:06] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:29 shared
[2025-06-04 22:36:06] -rw-r--r--. 2 boinc boinc    508877 Jun  4 18:29 input.tar.gz
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:29 boinc_lockfile
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc      2525 Jun  4 18:30 pandaJob.out
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc    990984 Jun  4 18:33 agis_schedconf.cvmfs.json
[2025-06-04 22:36:06] drwx------. 4 boinc boinc      4096 Jun  4 18:33 pilot3
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc 177160289 Jun  4 22:18 HITS.45006595._050701.pool.root.1
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:18 boinc_task_state.xml
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc      1027 Jun  4 22:19 memory_monitor_summary.json
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc   1598969 Jun  4 22:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc    392269 Jun  4 22:19 log.45006595._050701.job.log.tgz.1
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc        95 Jun  4 22:20 pilot_heartbeat.json
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc      7689 Jun  4 22:20 heartbeat.json
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc      4539 Jun  4 22:21 pilotlog.txt
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc   1167840 Jun  4 22:21 log.45006595._050701.job.log.1
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc       357 Jun  4 22:21 output.list
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:21 runtime_log
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc   1576960 Jun  4 22:21 result.tar.gz
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc      8659 Jun  4 22:21 runtime_log.err
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc       657 Jun  4 22:21 aqVLDmO0sg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwXaKDmJPvv5m.diag
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc      8192 Jun  4 22:36 boinc_mmap_file
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc        28 Jun  4 22:36 wrapper_checkpoint.txt
[2025-06-04 22:36:06] -rw-r--r--. 1 boinc boinc     20454 Jun  4 22:36 stderr.txt
[2025-06-04 22:36:06] HITS file was successfully produced:
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc 177160289 Jun  4 22:18 shared/HITS.pool.root.1
[2025-06-04 22:36:06]  *** Contents of shared directory: ***
[2025-06-04 22:36:06] total 384056
[2025-06-04 22:36:06] -rw-r--r--. 2 boinc boinc 214003248 Jun  4 18:29 ATLAS.root_0
[2025-06-04 22:36:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:29 start_atlas.sh
[2025-06-04 22:36:06] -rw-r--r--. 2 boinc boinc    508877 Jun  4 18:29 input.tar.gz
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc 177160289 Jun  4 22:18 HITS.pool.root.1
[2025-06-04 22:36:06] -rw-------. 1 boinc boinc   1576960 Jun  4 22:21 result.tar.gz
22:36:08 (8682): run_atlas exited; CPU time 49553.090660
22:36:08 (8682): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN