Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:12:42 (441442): wrapper (7.7.26015): starting
03:12:42 (441442): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:12:42] Arguments: --nthreads 4
[2025-06-06 03:12:42] Threads: 4
[2025-06-06 03:12:42] Checking for CVMFS
[2025-06-06 03:12:42] No cvmfs_config command found, will try listing directly
[2025-06-06 03:12:42] CVMFS is ok
[2025-06-06 03:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:12:42] Further information can be found at the LHC@home message board.
[2025-06-06 03:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:12:42] Checking for apptainer binary...
[2025-06-06 03:12:42] which: no apptainer in ((null))
[2025-06-06 03:12:42] apptainer is not installed, using version from CVMFS
[2025-06-06 03:12:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:12:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 03:12:42] apptainer works
[2025-06-06 03:12:42] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:12:42] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:12:43] Starting ATLAS job with PandaID=6678151071
[2025-06-06 03:12:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:53:34]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:53:34] 2025-06-06 03:49:43,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:53:34] 2025-06-06 03:49:44,429 | WARNING  | process 452122 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 05:53:34] 2025-06-06 03:49:44,429 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6678151071/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:53:34] 2025-06-06 03:49:44,770 | INFO     | number of running child processes to parent process 452122: 1
[2025-06-06 05:53:34] 2025-06-06 03:49:44,770 | INFO     | maximum number of monitored processes: 6
[2025-06-06 05:53:34] 2025-06-06 03:49:47,273 | INFO     | monitor loop #686: job 0:6678151071 is in state 'finished'
[2025-06-06 05:53:34] 2025-06-06 03:49:47,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,114 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 05:53:34] 2025-06-06 03:49:48,114 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6678151071/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,115 | INFO     | extracted standard info from prmon json
[2025-06-06 05:53:34] 2025-06-06 03:49:48,115 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:53:34] 2025-06-06 03:49:48,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:53:34] 2025-06-06 03:49:48,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:53:34] 2025-06-06 03:49:48,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:53:34] 2025-06-06 03:49:48,120 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:53:34] 2025-06-06 03:49:48,121 | INFO     | sum of square deviations: 1132458442.5
[2025-06-06 05:53:34] 2025-06-06 03:49:48,122 | INFO     | sum of deviations: 7039284923.500001
[2025-06-06 05:53:34] 2025-06-06 03:49:48,122 | INFO     | mean x: 1749177066.5
[2025-06-06 05:53:34] 2025-06-06 03:49:48,122 | INFO     | mean y: 2336629.772727273
[2025-06-06 05:53:34] 2025-06-06 03:49:48,122 | INFO     | -- intersect: -10870429460.931221
[2025-06-06 05:53:34] 2025-06-06 03:49:48,122 | INFO     | intersect: -10870429460.931221
[2025-06-06 05:53:34] 2025-06-06 03:49:48,122 | INFO     | chi2: 1.8324967222210016
[2025-06-06 05:53:34] 2025-06-06 03:49:48,123 | INFO     | sum of square deviations: 1025693650.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,123 | INFO     | sum of deviations: 7079170291.999998
[2025-06-06 05:53:34] 2025-06-06 03:49:48,123 | INFO     | mean x: 1749176914.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,124 | INFO     | mean y: 2336687.610738255
[2025-06-06 05:53:34] 2025-06-06 03:49:48,124 | INFO     | -- intersect: -12070197099.686312
[2025-06-06 05:53:34] 2025-06-06 03:49:48,124 | INFO     | intersect: -12070197099.686312
[2025-06-06 05:53:34] 2025-06-06 03:49:48,124 | INFO     | chi2: 1.8345017960971903
[2025-06-06 05:53:34] 2025-06-06 03:49:48,124 | INFO     | current chi2=1.8345017960971903 (change=-0.10941759687071037 %)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,124 | INFO     | right removable region: 148
[2025-06-06 05:53:34] 2025-06-06 03:49:48,125 | INFO     | sum of square deviations: 1025693650.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,125 | INFO     | sum of deviations: -18957397488.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | mean x: 1749177219.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | mean y: 2373309.7382550337
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | -- intersect: 32331566161.36352
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | intersect: 32331566161.36352
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | chi2: 0.05593354439836505
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | current chi2=0.05593354439836505 (change=96.94768652406793 %)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,126 | INFO     | sum of square deviations: 925859220.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,127 | INFO     | sum of deviations: -19148006384.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,127 | INFO     | mean x: 1749177371.5
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | mean y: 2373558.486111111
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | -- intersect: 36177699950.148926
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | intersect: 36177699950.148926
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | chi2: 0.044240946175042296
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | current chi2=0.044240946175042296 (change=20.904447141855957 %)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | left removable region: 20
[2025-06-06 05:53:34] 2025-06-06 03:49:48,128 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,129 | INFO     | sum of deviations: -14620095242.5
[2025-06-06 05:53:34] 2025-06-06 03:49:48,129 | INFO     | mean x: 1749177493.5
[2025-06-06 05:53:34] 2025-06-06 03:49:48,129 | INFO     | mean y: 2368724.8828125
[2025-06-06 05:53:34] 2025-06-06 03:49:48,130 | INFO     | -- intersect: 39330404624.848564
[2025-06-06 05:53:34] 2025-06-06 03:49:48,130 | INFO     | intersect: 39330404624.848564
[2025-06-06 05:53:34] 2025-06-06 03:49:48,130 | INFO     | chi2: 0.04100917219981651
[2025-06-06 05:53:34] 2025-06-06 03:49:48,130 | INFO     | -- intersect: 39330404624.848564
[2025-06-06 05:53:34] 2025-06-06 03:49:48,130 | INFO     | current memory leak: -22.48 B/s (using 128 data points, chi2=0.04)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | ..............................
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | . Timing measurements:
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | . get job = 0 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | . initial setup = 1 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | . payload setup = 6 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | . stage-in = 0 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,131 | INFO     | . payload execution = 9381 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,132 | INFO     | . stage-out = 0 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,132 | INFO     | . log creation = 0 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,132 | INFO     | ..............................
[2025-06-06 05:53:34] 2025-06-06 03:49:48,333 | INFO     | 
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | job summary report
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | --------------------------------------------------
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | PanDA job id: 6678151071
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | task id: 45006595
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | errors: (none)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | pilot state: finished 
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | transexitcode: 0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | exeerrorcode: 0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | exeerrordiag: 
[2025-06-06 05:53:34] 2025-06-06 03:49:48,334 | INFO     | exitcode: 0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | exitmsg: OK
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | cpuconsumptiontime: 35528 s
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | nevents: 400
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | neventsw: 0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | pid: 452122
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | pgrp: 452122
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | corecount: 4
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | event service: False
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | sizes: {0: 2397353, 1: 2397353, 5: 2397587, 11: 2397643, 9392: 2425907, 9393: 2434870, 9394: 2435054, 9400: 2435224}
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | --------------------------------------------------
[2025-06-06 05:53:34] 2025-06-06 03:49:48,335 | INFO     | 
[2025-06-06 05:53:34] 2025-06-06 03:49:48,336 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-06 05:53:34] 2025-06-06 03:49:48,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:53:34] 2025-06-06 03:49:48,361 | INFO     | job 6678151071 has completed (purged errors)
[2025-06-06 05:53:34] 2025-06-06 03:49:48,361 | INFO     | overall cleanup function is called
[2025-06-06 05:53:34] 2025-06-06 03:49:49,369 | INFO     | --- collectZombieJob: --- 10, [452122]
[2025-06-06 05:53:34] 2025-06-06 03:49:49,369 | INFO     | zombie collector waiting for pid 452122
[2025-06-06 05:53:34] 2025-06-06 03:49:49,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:53:34] 2025-06-06 03:49:49,369 | INFO     | collected zombie processes
[2025-06-06 05:53:34] 2025-06-06 03:49:49,369 | INFO     | will attempt to kill all subprocesses of pid=452122
[2025-06-06 05:53:34] 2025-06-06 03:49:49,698 | INFO     | process IDs to be killed: [452122] (in reverse order)
[2025-06-06 05:53:34] 2025-06-06 03:49:49,797 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:53:34] 2025-06-06 03:49:49,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:53:34] 2025-06-06 03:49:49,808 | INFO     | did not find any defunct processes belonging to 452122
[2025-06-06 05:53:34] 2025-06-06 03:49:49,817 | INFO     | did not find any defunct processes belonging to 452122
[2025-06-06 05:53:34] 2025-06-06 03:49:49,818 | INFO     | ready for new job
[2025-06-06 05:53:34] 2025-06-06 03:49:49,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:53:34] 2025-06-06 03:49:49,820 | INFO     | **************************************
[2025-06-06 05:53:34] 2025-06-06 03:49:49,820 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:53:34] 2025-06-06 03:49:49,820 | INFO     | **************************************
[2025-06-06 05:53:34] 2025-06-06 03:49:49,821 | INFO     | 
[2025-06-06 05:53:34] 2025-06-06 03:49:49,824 | INFO     | architecture information:
[2025-06-06 05:53:34] 2025-06-06 03:49:49,824 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:53:34] 2025-06-06 03:49:49,840 | INFO     | cat /etc/os-release:
[2025-06-06 05:53:34] NAME="CentOS Linux"
[2025-06-06 05:53:34] VERSION="7 (Core)"
[2025-06-06 05:53:34] ID="centos"
[2025-06-06 05:53:34] ID_LIKE="rhel fedora"
[2025-06-06 05:53:34] VERSION_ID="7"
[2025-06-06 05:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:53:34] ANSI_COLOR="0;31"
[2025-06-06 05:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:53:34] HOME_URL="https://www.centos.org/"
[2025-06-06 05:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:53:34] 
[2025-06-06 05:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:53:34] 
[2025-06-06 05:53:34] 2025-06-06 03:49:49,840 | INFO     | **************************************
[2025-06-06 05:53:34] 2025-06-06 03:49:50,343 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-06 05:53:34] 2025-06-06 03:49:50,360 | INFO     | sufficient remaining disk space (632595415040 B)
[2025-06-06 05:53:34] 2025-06-06 03:49:50,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:53:34] 2025-06-06 03:49:50,360 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:53:34] 2025-06-06 03:49:50,360 | INFO     | update_server=False
[2025-06-06 05:53:34] 2025-06-06 03:49:50,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:53:34] 2025-06-06 03:49:50,361 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:53:34] 2025-06-06 03:49:50,361 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:53:34] 2025-06-06 03:49:50,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:53:34] 2025-06-06 03:49:50,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:53:34] 2025-06-06 03:49:50,381 | INFO     | all job control threads have been joined
[2025-06-06 05:53:34] 2025-06-06 03:49:50,435 | INFO     | all payload control threads have been joined
[2025-06-06 05:53:34] 2025-06-06 03:49:50,561 | INFO     | all data control threads have been joined
[2025-06-06 05:53:34] 2025-06-06 03:49:50,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:53:34] 2025-06-06 03:49:50,782 | INFO     | aborting loop
[2025-06-06 05:53:34] 2025-06-06 03:49:51,366 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,387 | INFO     | [job] control thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,441 | INFO     | [payload] control thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,567 | INFO     | [data] control thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,643 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:53:34] 2025-06-06 03:49:51,786 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:51,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:53:34] 2025-06-06 03:49:52,127 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:52,214 | INFO     | [job] validate thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:52,646 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:52,715 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:52,727 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:52,826 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:53,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:53:34] 2025-06-06 03:49:53,680 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:54,272 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:55,913 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:53:34] 2025-06-06 03:49:56,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22605838112576)>', '<ExcThread(monitor, started 22605597730560)>']
[2025-06-06 05:53:34] 2025-06-06 03:49:56,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:53:34] 2025-06-06 03:49:56,392 | INFO     | [monitor] control thread has ended
[2025-06-06 05:53:34] 2025-06-06 03:50:01,215 | INFO     | all workflow threads have been joined
[2025-06-06 05:53:34] 2025-06-06 03:50:01,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:53:34] 2025-06-06 03:50:01,215 | INFO     | traces error code: 0
[2025-06-06 05:53:34] 2025-06-06 03:50:01,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:53:34] 2025-06-06 03:50:01,373 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:53:34] 2025-06-06 03:50:01,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:53:34] 2025-06-06 03:50:01,379 [wrapper] pilotpid: 445143
[2025-06-06 05:53:34] 2025-06-06 03:50:01,382 [wrapper] Pilot exit status: 0
[2025-06-06 05:53:34] 2025-06-06 03:50:01,392 [wrapper] pandaids: 6678151071
[2025-06-06 05:53:34] 2025-06-06 03:50:01,458 [wrapper] cleanup supervisor_pilot  647285 445144
[2025-06-06 05:53:34] 2025-06-06 03:50:01,461 [wrapper] Test setup, not cleaning
[2025-06-06 05:53:34] 2025-06-06 03:50:01,464 [wrapper] apfmon messages muted
[2025-06-06 05:53:34] 2025-06-06 03:50:01,467 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:53:34] 2025-06-06 03:50:01,470 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:53:34]  *** Error codes and diagnostics ***
[2025-06-06 05:53:34]     "exeErrorCode": 0,
[2025-06-06 05:53:34]     "exeErrorDiag": "",
[2025-06-06 05:53:34]     "pilotErrorCode": 0,
[2025-06-06 05:53:34]     "pilotErrorDiag": "",
[2025-06-06 05:53:34]  *** Listing of results directory ***
[2025-06-06 05:53:34] total 382544
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:27 queuedata.json
[2025-06-06 05:53:34] -rwx------ 1 boinc boinc     37140 Jun  4 00:27 runpilot2-wrapper.sh
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:53:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:12 run_atlas
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:12 job.xml
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc      6633 Jun  6 03:12 init_data.xml
[2025-06-06 05:53:34] -rw-r--r-- 2 boinc boinc 213534751 Jun  6 03:12 EVNT.45006593._001883.pool.root.1
[2025-06-06 05:53:34] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:12 start_atlas.sh
[2025-06-06 05:53:34] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:12 shared
[2025-06-06 05:53:34] -rw-r--r-- 2 boinc boinc    508884 Jun  6 03:12 input.tar.gz
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:12 boinc_lockfile
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc      2525 Jun  6 03:12 pandaJob.out
[2025-06-06 05:53:34] -rw------- 1 boinc boinc    987721 Jun  6 03:12 agis_schedconf.cvmfs.json
[2025-06-06 05:53:34] -rw------- 1 boinc boinc   1598969 Jun  6 03:12 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:53:34] drwx------ 4 boinc boinc      4096 Jun  6 03:12 pilot3
[2025-06-06 05:53:34] -rw------- 1 boinc boinc 171978865 Jun  6 05:49 HITS.45006595._046972.pool.root.1
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc       528 Jun  6 05:49 boinc_task_state.xml
[2025-06-06 05:53:34] -rw------- 1 boinc boinc        95 Jun  6 05:49 pilot_heartbeat.json
[2025-06-06 05:53:34] -rw------- 1 boinc boinc      1034 Jun  6 05:49 memory_monitor_summary.json
[2025-06-06 05:53:34] -rw------- 1 boinc boinc    293604 Jun  6 05:49 log.45006595._046972.job.log.tgz.1
[2025-06-06 05:53:34] -rw------- 1 boinc boinc      7727 Jun  6 05:49 heartbeat.json
[2025-06-06 05:53:34] -rw------- 1 boinc boinc      4486 Jun  6 05:50 pilotlog.txt
[2025-06-06 05:53:34] -rw------- 1 boinc boinc    891269 Jun  6 05:50 log.45006595._046972.job.log.1
[2025-06-06 05:53:34] -rw------- 1 boinc boinc       357 Jun  6 05:50 output.list
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:50 runtime_log
[2025-06-06 05:53:34] -rw------- 1 boinc boinc   1208320 Jun  6 05:50 result.tar.gz
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc      9025 Jun  6 05:50 runtime_log.err
[2025-06-06 05:53:34] -rw------- 1 boinc boinc       662 Jun  6 05:50 AlLODmEHpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8LmKDmsmZBSn.diag
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc        27 Jun  6 05:53 wrapper_checkpoint.txt
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:53 boinc_mmap_file
[2025-06-06 05:53:34] -rw-r--r-- 1 boinc boinc     21003 Jun  6 05:53 stderr.txt
[2025-06-06 05:53:34] HITS file was successfully produced:
[2025-06-06 05:53:34] -rw------- 1 boinc boinc 171978865 Jun  6 05:49 shared/HITS.pool.root.1
[2025-06-06 05:53:34]  *** Contents of shared directory: ***
[2025-06-06 05:53:34] total 378188
[2025-06-06 05:53:34] -rw-r--r-- 2 boinc boinc 213534751 Jun  6 03:12 ATLAS.root_0
[2025-06-06 05:53:34] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:12 start_atlas.sh
[2025-06-06 05:53:34] -rw-r--r-- 2 boinc boinc    508884 Jun  6 03:12 input.tar.gz
[2025-06-06 05:53:34] -rw------- 1 boinc boinc 171978865 Jun  6 05:49 HITS.pool.root.1
[2025-06-06 05:53:34] -rw------- 1 boinc boinc   1208320 Jun  6 05:50 result.tar.gz
05:53:36 (441442): run_atlas exited; CPU time 35904.713523
05:53:36 (441442): called boinc_finish(0)

</stderr_txt>
]]>

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