Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:24:54 (29684): wrapper (7.7.26015): starting
03:24:54 (29684): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:24:54] Arguments: --nthreads 8
[2025-06-04 03:24:54] Threads: 8
[2025-06-04 03:24:54] Checking for CVMFS
[2025-06-04 03:24:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:24:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:24:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:24:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:24:54] 2.11.2.0 4905 2467 71420 146772 2 56 16007514 18432001 2841 130560 0 7714902 99.998 554701 47720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:24:54] CVMFS is ok
[2025-06-04 03:24:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:24:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:24:54] Further information can be found at the LHC@home message board.
[2025-06-04 03:24:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:24:54] Checking for apptainer binary...
[2025-06-04 03:24:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:24:54] Running /usr/bin/apptainer --version
[2025-06-04 03:24:54] apptainer version 1.3.2-1.el7
[2025-06-04 03:24:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:24:55] c-211-32.aglt2.org
[2025-06-04 03:24:55] apptainer works
[2025-06-04 03:24:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:24:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:24:55] Starting ATLAS job with PandaID=6678213833
[2025-06-04 03:24:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:46:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:46:42] 2025-06-04 09:46:22,491 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:46:42] 2025-06-04 09:46:22,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:46:42] 2025-06-04 09:46:22,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:46:42] 2025-06-04 09:46:22,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:46:42] 2025-06-04 09:46:22,497 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:46:42] 2025-06-04 09:46:22,497 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,498 | INFO     | sum of deviations: 96297162.0000019
[2025-06-04 05:46:42] 2025-06-04 09:46:22,498 | INFO     | mean x: 1749026137.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,498 | INFO     | mean y: 2476555.3956834534
[2025-06-04 05:46:42] 2025-06-04 09:46:22,499 | INFO     | -- intersect: -199783183.05686232
[2025-06-04 05:46:42] 2025-06-04 09:46:22,499 | INFO     | intersect: -199783183.05686232
[2025-06-04 05:46:42] 2025-06-04 09:46:22,499 | INFO     | chi2: 2.151995303932946
[2025-06-04 05:46:42] 2025-06-04 09:46:22,500 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 05:46:42] 2025-06-04 09:46:22,501 | INFO     | sum of deviations: 9756660402.500004
[2025-06-04 05:46:42] 2025-06-04 09:46:22,501 | INFO     | mean x: 1749025984.5
[2025-06-04 05:46:42] 2025-06-04 09:46:22,501 | INFO     | mean y: 2493058.1119402987
[2025-06-04 05:46:42] 2025-06-04 09:46:22,501 | INFO     | -- intersect: -22870806553.359745
[2025-06-04 05:46:42] 2025-06-04 09:46:22,501 | INFO     | intersect: -22870806553.359745
[2025-06-04 05:46:42] 2025-06-04 09:46:22,502 | INFO     | chi2: 1.287822652662054
[2025-06-04 05:46:42] 2025-06-04 09:46:22,502 | INFO     | current chi2=1.287822652662054 (change=40.15680934301047 %)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,502 | INFO     | sum of square deviations: 665612480.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,503 | INFO     | sum of deviations: 9569646083.999996
[2025-06-04 05:46:42] 2025-06-04 09:46:22,503 | INFO     | mean x: 1749025832.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,503 | INFO     | mean y: 2492703.3410852714
[2025-06-04 05:46:42] 2025-06-04 09:46:22,504 | INFO     | -- intersect: -25143607628.211647
[2025-06-04 05:46:42] 2025-06-04 09:46:22,504 | INFO     | intersect: -25143607628.211647
[2025-06-04 05:46:42] 2025-06-04 09:46:22,504 | INFO     | chi2: 1.2894117131619796
[2025-06-04 05:46:42] 2025-06-04 09:46:22,504 | INFO     | current chi2=1.2894117131619796 (change=-0.12339125240892718 %)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,504 | INFO     | right removable region: 128
[2025-06-04 05:46:42] 2025-06-04 09:46:22,505 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 05:46:42] 2025-06-04 09:46:22,506 | INFO     | sum of deviations: -18477521010.5
[2025-06-04 05:46:42] 2025-06-04 09:46:22,506 | INFO     | mean x: 1749026289.5
[2025-06-04 05:46:42] 2025-06-04 09:46:22,506 | INFO     | mean y: 2508683.156716418
[2025-06-04 05:46:42] 2025-06-04 09:46:22,506 | INFO     | -- intersect: 43320809250.797195
[2025-06-04 05:46:42] 2025-06-04 09:46:22,506 | INFO     | intersect: 43320809250.797195
[2025-06-04 05:46:42] 2025-06-04 09:46:22,507 | INFO     | chi2: 0.9077936828581252
[2025-06-04 05:46:42] 2025-06-04 09:46:22,507 | INFO     | current chi2=0.9077936828581252 (change=57.81618662461489 %)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,507 | INFO     | sum of square deviations: 665612480.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,508 | INFO     | sum of deviations: -17170204238.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,508 | INFO     | mean x: 1749026442.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,508 | INFO     | mean y: 2506198.2480620155
[2025-06-04 05:46:42] 2025-06-04 09:46:22,509 | INFO     | -- intersect: 45120562318.23316
[2025-06-04 05:46:42] 2025-06-04 09:46:22,509 | INFO     | intersect: 45120562318.23316
[2025-06-04 05:46:42] 2025-06-04 09:46:22,509 | INFO     | chi2: 0.9085647440627354
[2025-06-04 05:46:42] 2025-06-04 09:46:22,509 | INFO     | current chi2=0.9085647440627354 (change=-0.08493793459572128 %)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,510 | INFO     | left removable region: 20
[2025-06-04 05:46:42] 2025-06-04 09:46:22,510 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,511 | INFO     | sum of deviations: -5664769087.0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,511 | INFO     | mean x: 1749026411.5
[2025-06-04 05:46:42] 2025-06-04 09:46:22,511 | INFO     | mean y: 2522739.925925926
[2025-06-04 05:46:42] 2025-06-04 09:46:22,511 | INFO     | -- intersect: 25369348393.127636
[2025-06-04 05:46:42] 2025-06-04 09:46:22,511 | INFO     | intersect: 25369348393.127636
[2025-06-04 05:46:42] 2025-06-04 09:46:22,512 | INFO     | chi2: 0.011593284571760957
[2025-06-04 05:46:42] 2025-06-04 09:46:22,512 | INFO     | -- intersect: 25369348393.127636
[2025-06-04 05:46:42] 2025-06-04 09:46:22,512 | INFO     | current memory leak: -14.50 B/s (using 108 data points, chi2=0.01)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,513 | INFO     | ..............................
[2025-06-04 05:46:42] 2025-06-04 09:46:22,513 | INFO     | . Timing measurements:
[2025-06-04 05:46:42] 2025-06-04 09:46:22,513 | INFO     | . get job = 0 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,513 | INFO     | . initial setup = 2 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,513 | INFO     | . payload setup = 5 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,513 | INFO     | . stage-in = 0 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,514 | INFO     | . payload execution = 8445 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,514 | INFO     | . stage-out = 0 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,514 | INFO     | . log creation = 0 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,514 | INFO     | ..............................
[2025-06-04 05:46:42] 2025-06-04 09:46:22,619 | INFO     | 
[2025-06-04 05:46:42] 2025-06-04 09:46:22,619 | INFO     | job summary report
[2025-06-04 05:46:42] 2025-06-04 09:46:22,619 | INFO     | --------------------------------------------------
[2025-06-04 05:46:42] 2025-06-04 09:46:22,619 | INFO     | PanDA job id: 6678213833
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | task id: 45006595
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | errors: (none)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | pilot state: finished 
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | transexitcode: 0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | exeerrorcode: 0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | exeerrordiag: 
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | exitcode: 0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | exitmsg: OK
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | cpuconsumptiontime: 64074 s
[2025-06-04 05:46:42] 2025-06-04 09:46:22,620 | INFO     | nevents: 400
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | neventsw: 0
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | pid: 41901
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | pgrp: 41901
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | corecount: 8
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | event service: False
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 8454: 2433171, 8455: 2442112, 8457: 2442168, 8463: 2442466}
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | --------------------------------------------------
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | 
[2025-06-04 05:46:42] 2025-06-04 09:46:22,621 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 05:46:42] 2025-06-04 09:46:22,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | job 6678213833 has completed (purged errors)
[2025-06-04 05:46:42] 2025-06-04 09:46:22,640 | INFO     | overall cleanup function is called
[2025-06-04 05:46:42] 2025-06-04 09:46:23,648 | INFO     | --- collectZombieJob: --- 10, [41901]
[2025-06-04 05:46:42] 2025-06-04 09:46:23,648 | INFO     | zombie collector waiting for pid 41901
[2025-06-04 05:46:42] 2025-06-04 09:46:23,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:46:42] 2025-06-04 09:46:23,648 | INFO     | collected zombie processes
[2025-06-04 05:46:42] 2025-06-04 09:46:23,648 | INFO     | will attempt to kill all subprocesses of pid=41901
[2025-06-04 05:46:42] 2025-06-04 09:46:23,864 | INFO     | process IDs to be killed: [41901] (in reverse order)
[2025-06-04 05:46:42] 2025-06-04 09:46:23,933 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:46:42] 2025-06-04 09:46:23,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:46:42] 2025-06-04 09:46:23,941 | INFO     | did not find any defunct processes belonging to 41901
[2025-06-04 05:46:42] 2025-06-04 09:46:23,948 | INFO     | did not find any defunct processes belonging to 41901
[2025-06-04 05:46:42] 2025-06-04 09:46:23,948 | INFO     | ready for new job
[2025-06-04 05:46:42] 2025-06-04 09:46:23,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:46:42] 2025-06-04 09:46:23,950 | INFO     | **************************************
[2025-06-04 05:46:42] 2025-06-04 09:46:23,950 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:46:42] 2025-06-04 09:46:23,951 | INFO     | **************************************
[2025-06-04 05:46:42] 2025-06-04 09:46:23,951 | INFO     | 
[2025-06-04 05:46:42] 2025-06-04 09:46:23,953 | INFO     | architecture information:
[2025-06-04 05:46:42] 2025-06-04 09:46:23,953 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:46:42] 2025-06-04 09:46:23,968 | INFO     | cat /etc/os-release:
[2025-06-04 05:46:42] NAME="CentOS Linux"
[2025-06-04 05:46:42] VERSION="7 (Core)"
[2025-06-04 05:46:42] ID="centos"
[2025-06-04 05:46:42] ID_LIKE="rhel fedora"
[2025-06-04 05:46:42] VERSION_ID="7"
[2025-06-04 05:46:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:46:42] ANSI_COLOR="0;31"
[2025-06-04 05:46:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:46:42] HOME_URL="https://www.centos.org/"
[2025-06-04 05:46:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:46:42] 
[2025-06-04 05:46:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:46:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:46:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:46:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:46:42] 
[2025-06-04 05:46:42] 2025-06-04 09:46:23,968 | INFO     | **************************************
[2025-06-04 05:46:42] 2025-06-04 09:46:24,472 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 05:46:42] 2025-06-04 09:46:24,495 | INFO     | sufficient remaining disk space (55496933376 B)
[2025-06-04 05:46:42] 2025-06-04 09:46:24,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:46:42] 2025-06-04 09:46:24,496 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:46:42] 2025-06-04 09:46:24,496 | INFO     | update_server=False
[2025-06-04 05:46:42] 2025-06-04 09:46:24,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:46:42] 2025-06-04 09:46:24,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:46:42] 2025-06-04 09:46:24,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:46:42] 2025-06-04 09:46:24,497 | INFO     | aborting loop
[2025-06-04 05:46:42] 2025-06-04 09:46:24,681 | INFO     | PID=33851 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 05:46:42] 2025-06-04 09:46:24,681 | INFO     | .. there are 5 such processes running
[2025-06-04 05:46:42] 2025-06-04 09:46:24,681 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:46:42] 2025-06-04 09:46:24,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:46:42] 2025-06-04 09:46:24,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:46:42] 2025-06-04 09:46:25,070 | INFO     | all data control threads have been joined
[2025-06-04 05:46:42] 2025-06-04 09:46:25,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:46:42] 2025-06-04 09:46:25,502 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:25,502 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:25,503 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:25,638 | INFO     | [job] validate thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:25,779 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:25,838 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:25,986 | INFO     | all payload control threads have been joined
[2025-06-04 05:46:42] 2025-06-04 09:46:26,000 | INFO     | all job control threads have been joined
[2025-06-04 05:46:42] 2025-06-04 09:46:26,076 | INFO     | [data] control thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:26,129 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:26,282 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:26,317 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:26,573 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:26,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:46:42] 2025-06-04 09:46:26,991 | INFO     | [payload] control thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:27,006 | INFO     | [job] control thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:27,081 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:30,807 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:34,693 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:46:42] 2025-06-04 09:46:35,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:46:42] 2025-06-04 09:46:36,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045275866944)>', '<ExcThread(monitor, started 140044832589568)>']
[2025-06-04 05:46:42] 2025-06-04 09:46:37,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:46:42] 2025-06-04 09:46:37,750 | INFO     | [monitor] control thread has ended
[2025-06-04 05:46:42] 2025-06-04 09:46:41,769 | INFO     | all workflow threads have been joined
[2025-06-04 05:46:42] 2025-06-04 09:46:41,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:46:42] 2025-06-04 09:46:41,770 | INFO     | traces error code: 0
[2025-06-04 05:46:42] 2025-06-04 09:46:41,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:46:42] 2025-06-04 09:46:41,846 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:46:42] 2025-06-04 09:46:41,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:46:42] 2025-06-04 09:46:41,860 [wrapper] pilotpid: 33851
[2025-06-04 05:46:42] 2025-06-04 09:46:41,863 [wrapper] Pilot exit status: 0
[2025-06-04 05:46:42] 2025-06-04 09:46:41,871 [wrapper] pandaids: 6678213833
[2025-06-04 05:46:42] 2025-06-04 09:46:41,906 [wrapper] cleanup supervisor_pilot 10470 33852
[2025-06-04 05:46:42] 2025-06-04 09:46:41,908 [wrapper] Test setup, not cleaning
[2025-06-04 05:46:42] 2025-06-04 09:46:41,910 [wrapper] apfmon messages muted
[2025-06-04 05:46:42] 2025-06-04 09:46:41,912 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:46:42] 2025-06-04 09:46:41,914 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:46:42]  *** Error codes and diagnostics ***
[2025-06-04 05:46:42]     "exeErrorCode": 0,
[2025-06-04 05:46:42]     "exeErrorDiag": "",
[2025-06-04 05:46:42]     "pilotErrorCode": 0,
[2025-06-04 05:46:42]     "pilotErrorDiag": "",
[2025-06-04 05:46:42]  *** Listing of results directory ***
[2025-06-04 05:46:42] total 393376
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:53 pilot3.tar.gz
[2025-06-04 05:46:42] -rwx------ 1 boincer umatlas     37140 Jun  3 19:57 runpilot2-wrapper.sh
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 19:57 queuedata.json
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:46:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:24 run_atlas
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:24 job.xml
[2025-06-04 05:46:42] -rw-r--r-- 2 boincer umatlas 214473911 Jun  4 03:24 EVNT.45006593._001952.pool.root.1
[2025-06-04 05:46:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:24 start_atlas.sh
[2025-06-04 05:46:42] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:24 shared
[2025-06-04 05:46:42] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 03:24 input.tar.gz
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:24 boinc_lockfile
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 03:24 pandaJob.out
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas    986745 Jun  4 03:25 agis_schedconf.cvmfs.json
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas   1603667 Jun  4 03:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:46:42] drwx------ 4 boincer umatlas      4096 Jun  4 03:25 pilot3
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas 182253118 Jun  4 05:45 HITS.45006595._048673.pool.root.1
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas        95 Jun  4 05:45 pilot_heartbeat.json
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas       530 Jun  4 05:46 boinc_task_state.xml
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas      6033 Jun  4 05:46 init_data.xml
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas      1048 Jun  4 05:46 memory_monitor_summary.json
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas    349040 Jun  4 05:46 log.45006595._048673.job.log.tgz.1
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas      7735 Jun  4 05:46 heartbeat.json
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:46 wrapper_checkpoint.txt
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:46 boinc_mmap_file
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas      4818 Jun  4 05:46 pilotlog.txt
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas    780900 Jun  4 05:46 log.45006595._048673.job.log.1
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas       357 Jun  4 05:46 output.list
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:46 runtime_log
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas   1146880 Jun  4 05:46 result.tar.gz
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 05:46 runtime_log.err
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas       658 Jun  4 05:46 2lXLDmvgqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmILaKDmLPk2qn.diag
[2025-06-04 05:46:42] -rw-r--r-- 1 boincer umatlas     20827 Jun  4 05:46 stderr.txt
[2025-06-04 05:46:42] HITS file was successfully produced:
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas 182253118 Jun  4 05:45 shared/HITS.pool.root.1
[2025-06-04 05:46:42]  *** Contents of shared directory: ***
[2025-06-04 05:46:42] total 389072
[2025-06-04 05:46:42] -rw-r--r-- 2 boincer umatlas 214473911 Jun  4 03:24 ATLAS.root_0
[2025-06-04 05:46:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:24 start_atlas.sh
[2025-06-04 05:46:42] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 03:24 input.tar.gz
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas 182253118 Jun  4 05:45 HITS.pool.root.1
[2025-06-04 05:46:42] -rw------- 1 boincer umatlas   1146880 Jun  4 05:46 result.tar.gz
05:46:43 (29684): run_atlas exited; CPU time 64307.059714
05:46:43 (29684): called boinc_finish(0)

</stderr_txt>
]]>

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