Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:23:31 (28681): wrapper (7.7.26015): starting
03:23:31 (28681): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:23:31] Arguments: --nthreads 8
[2025-06-04 03:23:31] Threads: 8
[2025-06-04 03:23:31] Checking for CVMFS
[2025-06-04 03:23:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:23:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:23:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:23:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:23:32] 2.11.2.0 2886 35330 70304 146772 3 55 17216489 20275200 1 130560 0 11408896 99.976 6613665 8017 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:23:32] CVMFS is ok
[2025-06-04 03:23:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:23:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:23:32] Further information can be found at the LHC@home message board.
[2025-06-04 03:23:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:23:32] Checking for apptainer binary...
[2025-06-04 03:23:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:23:32] Running /usr/bin/apptainer --version
[2025-06-04 03:23:32] apptainer version 1.3.2-1.el7
[2025-06-04 03:23:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:23:33] c-115-10.aglt2.org
[2025-06-04 03:23:33] apptainer works
[2025-06-04 03:23:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:23:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:23:33] Starting ATLAS job with PandaID=6678156223
[2025-06-04 03:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:02:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:02:45]  is_tar=False
[2025-06-04 05:02:45]  lfn=log.45006595._048210.job.log.tgz.1
[2025-06-04 05:02:45]  mtime=0
[2025-06-04 05:02:45]  protocol_id=None
[2025-06-04 05:02:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:02:45]  replicas=None
[2025-06-04 05:02:45]  scope=mc23_13p6TeV
[2025-06-04 05:02:45]  status=None
[2025-06-04 05:02:45]  status_code=0
[2025-06-04 05:02:45]  storage_token=
[2025-06-04 05:02:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678156223/log.45006595._048210.job.log.tgz.1
[2025-06-04 05:02:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/61/log.45006595._048210.job.log.tgz.1
[2025-06-04 05:02:45]  workdir=None
[2025-06-04 05:02:45] ]
[2025-06-04 05:02:45] 2025-06-04 09:02:17,118 | INFO     | transferring file log.45006595._048210.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678156223/log.45006595._048210.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:02:45] 2025-06-04 09:02:17,119 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678156223/log.45006595._048210.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048210.job
[2025-06-04 05:02:45] 2025-06-04 09:02:17,144 | INFO     | adding to output.list: log.45006595._048210.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/61/log.45006595._048210.job.log.tg
[2025-06-04 05:02:45] 2025-06-04 09:02:17,145 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:02:45] 2025-06-04 09:02:17,146 | INFO     | summary of transferred files:
[2025-06-04 05:02:45] 2025-06-04 09:02:17,146 | INFO     |  -- lfn=log.45006595._048210.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:02:45] 2025-06-04 09:02:17,146 | INFO     | stage-out finished correctly
[2025-06-04 05:02:45] 2025-06-04 09:02:17,485 | INFO     | PID=32267 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:02:45] 2025-06-04 09:02:17,587 | WARNING  | process 6569 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 05:02:45] 2025-06-04 09:02:17,588 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678156223/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:02:45] 2025-06-04 09:02:17,669 | INFO     | number of running child processes to parent process 6569: 1
[2025-06-04 05:02:45] 2025-06-04 09:02:17,670 | INFO     | maximum number of monitored processes: 6
[2025-06-04 05:02:45] 2025-06-04 09:02:19,251 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:02:45] 2025-06-04 09:02:19,600 | INFO     | job 6678156223 has state=finished
[2025-06-04 05:02:45] 2025-06-04 09:02:19,600 | INFO     | preparing for final server update for job 6678156223 in state='finished'
[2025-06-04 05:02:45] 2025-06-04 09:02:19,601 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:02:45] 2025-06-04 09:02:19,601 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:02:45] 2025-06-04 09:02:19,601 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:02:45] 2025-06-04 09:02:19,602 | INFO     | job 6678156223 has finished - writing final server update
[2025-06-04 05:02:45] 2025-06-04 09:02:19,602 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:02:45] 2025-06-04 09:02:19,604 | INFO     | executing command: lscpu
[2025-06-04 05:02:45] 2025-06-04 09:02:19,633 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:02:45] 2025-06-04 09:02:20,173 | INFO     | monitor loop #438: job 0:6678156223 is in state 'finished'
[2025-06-04 05:02:45] 2025-06-04 09:02:20,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:02:45] 2025-06-04 09:02:22,676 | INFO     | monitor loop #439: job 0:6678156223 is in state 'finished'
[2025-06-04 05:02:45] 2025-06-04 09:02:22,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:02:45] 2025-06-04 09:02:24,995 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 05:02:45] 2025-06-04 09:02:24,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678156223/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:02:45] 2025-06-04 09:02:24,997 | INFO     | extracted standard info from prmon json
[2025-06-04 05:02:45] 2025-06-04 09:02:24,997 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:02:45] 2025-06-04 09:02:24,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:02:45] 2025-06-04 09:02:24,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:02:45] 2025-06-04 09:02:24,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:02:45] 2025-06-04 09:02:25,002 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:02:45] 2025-06-04 09:02:25,003 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 05:02:45] 2025-06-04 09:02:25,003 | INFO     | sum of deviations: -15591058899.500002
[2025-06-04 05:02:45] 2025-06-04 09:02:25,003 | INFO     | mean x: 1749024881.5
[2025-06-04 05:02:45] 2025-06-04 09:02:25,003 | INFO     | mean y: 2634300.3444444444
[2025-06-04 05:02:45] 2025-06-04 09:02:25,004 | INFO     | -- intersect: 120650395573.22337
[2025-06-04 05:02:45] 2025-06-04 09:02:25,004 | INFO     | intersect: 120650395573.22337
[2025-06-04 05:02:45] 2025-06-04 09:02:25,004 | INFO     | chi2: 0.09944058901404333
[2025-06-04 05:02:45] 2025-06-04 09:02:25,004 | INFO     | -- intersect: 120650395573.22337
[2025-06-04 05:02:45] 2025-06-04 09:02:25,004 | INFO     | current memory leak: -68.98 B/s (using 90 data points, chi2=0.10)
[2025-06-04 05:02:45] 2025-06-04 09:02:25,005 | INFO     | ..............................
[2025-06-04 05:02:45] 2025-06-04 09:02:25,005 | INFO     | . Timing measurements:
[2025-06-04 05:02:45] 2025-06-04 09:02:25,005 | INFO     | . get job = 0 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | . initial setup = 2 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | . payload setup = 11 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | . stage-in = 0 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | . payload execution = 5875 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | . stage-out = 0 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | . log creation = 0 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,006 | INFO     | ..............................
[2025-06-04 05:02:45] 2025-06-04 09:02:25,097 | INFO     | 
[2025-06-04 05:02:45] 2025-06-04 09:02:25,097 | INFO     | job summary report
[2025-06-04 05:02:45] 2025-06-04 09:02:25,098 | INFO     | --------------------------------------------------
[2025-06-04 05:02:45] 2025-06-04 09:02:25,098 | INFO     | PanDA job id: 6678156223
[2025-06-04 05:02:45] 2025-06-04 09:02:25,098 | INFO     | task id: 45006595
[2025-06-04 05:02:45] 2025-06-04 09:02:25,098 | INFO     | errors: (none)
[2025-06-04 05:02:45] 2025-06-04 09:02:25,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:02:45] 2025-06-04 09:02:25,099 | INFO     | pilot state: finished 
[2025-06-04 05:02:45] 2025-06-04 09:02:25,099 | INFO     | transexitcode: 0
[2025-06-04 05:02:45] 2025-06-04 09:02:25,099 | INFO     | exeerrorcode: 0
[2025-06-04 05:02:45] 2025-06-04 09:02:25,099 | INFO     | exeerrordiag: 
[2025-06-04 05:02:45] 2025-06-04 09:02:25,099 | INFO     | exitcode: 0
[2025-06-04 05:02:45] 2025-06-04 09:02:25,099 | INFO     | exitmsg: OK
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | cpuconsumptiontime: 43465 s
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | nevents: 400
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | neventsw: 0
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | pid: 6569
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | pgrp: 6569
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | corecount: 8
[2025-06-04 05:02:45] 2025-06-04 09:02:25,100 | INFO     | event service: False
[2025-06-04 05:02:45] 2025-06-04 09:02:25,101 | INFO     | sizes: {0: 2405011, 1: 2405210, 6: 2405416, 12: 2405444, 5890: 2431987, 5891: 2440928, 5893: 2441112, 5899: 2441282}
[2025-06-04 05:02:45] 2025-06-04 09:02:25,101 | INFO     | --------------------------------------------------
[2025-06-04 05:02:45] 2025-06-04 09:02:25,101 | INFO     | 
[2025-06-04 05:02:45] 2025-06-04 09:02:25,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:02:45] 2025-06-04 09:02:25,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:02:45] 2025-06-04 09:02:25,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:02:45] 2025-06-04 09:02:25,132 | INFO     | job 6678156223 has completed (purged errors)
[2025-06-04 05:02:45] 2025-06-04 09:02:25,132 | INFO     | overall cleanup function is called
[2025-06-04 05:02:45] 2025-06-04 09:02:26,140 | INFO     | --- collectZombieJob: --- 10, [6569]
[2025-06-04 05:02:45] 2025-06-04 09:02:26,140 | INFO     | zombie collector waiting for pid 6569
[2025-06-04 05:02:45] 2025-06-04 09:02:26,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:02:45] 2025-06-04 09:02:26,141 | INFO     | collected zombie processes
[2025-06-04 05:02:45] 2025-06-04 09:02:26,141 | INFO     | will attempt to kill all subprocesses of pid=6569
[2025-06-04 05:02:45] 2025-06-04 09:02:26,225 | INFO     | process IDs to be killed: [6569] (in reverse order)
[2025-06-04 05:02:45] 2025-06-04 09:02:26,281 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:02:45] 2025-06-04 09:02:26,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:02:45] 2025-06-04 09:02:26,286 | INFO     | did not find any defunct processes belonging to 6569
[2025-06-04 05:02:45] 2025-06-04 09:02:26,290 | INFO     | did not find any defunct processes belonging to 6569
[2025-06-04 05:02:45] 2025-06-04 09:02:26,291 | INFO     | ready for new job
[2025-06-04 05:02:45] 2025-06-04 09:02:26,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:02:45] 2025-06-04 09:02:26,292 | INFO     | **************************************
[2025-06-04 05:02:45] 2025-06-04 09:02:26,292 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:02:45] 2025-06-04 09:02:26,293 | INFO     | **************************************
[2025-06-04 05:02:45] 2025-06-04 09:02:26,293 | INFO     | 
[2025-06-04 05:02:45] 2025-06-04 09:02:26,293 | INFO     | architecture information:
[2025-06-04 05:02:45] 2025-06-04 09:02:26,294 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:02:45] 2025-06-04 09:02:26,311 | INFO     | cat /etc/os-release:
[2025-06-04 05:02:45] NAME="CentOS Linux"
[2025-06-04 05:02:45] VERSION="7 (Core)"
[2025-06-04 05:02:45] ID="centos"
[2025-06-04 05:02:45] ID_LIKE="rhel fedora"
[2025-06-04 05:02:45] VERSION_ID="7"
[2025-06-04 05:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:02:45] ANSI_COLOR="0;31"
[2025-06-04 05:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:02:45] HOME_URL="https://www.centos.org/"
[2025-06-04 05:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:02:45] 
[2025-06-04 05:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:02:45] 
[2025-06-04 05:02:45] 2025-06-04 09:02:26,311 | INFO     | **************************************
[2025-06-04 05:02:45] 2025-06-04 09:02:26,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:02:45] 2025-06-04 09:02:26,833 | INFO     | sufficient remaining disk space (18651021312 B)
[2025-06-04 05:02:45] 2025-06-04 09:02:26,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:02:45] 2025-06-04 09:02:26,834 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:02:45] 2025-06-04 09:02:26,834 | INFO     | update_server=False
[2025-06-04 05:02:45] 2025-06-04 09:02:26,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:02:45] 2025-06-04 09:02:26,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:45] 2025-06-04 09:02:26,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:45] 2025-06-04 09:02:26,836 | INFO     | aborting loop
[2025-06-04 05:02:45] 2025-06-04 09:02:26,886 | INFO     | all data control threads have been joined
[2025-06-04 05:02:45] 2025-06-04 09:02:27,140 | INFO     | all payload control threads have been joined
[2025-06-04 05:02:45] 2025-06-04 09:02:27,155 | INFO     | all job control threads have been joined
[2025-06-04 05:02:45] 2025-06-04 09:02:27,508 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:02:45] 2025-06-04 09:02:27,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:02:45] 2025-06-04 09:02:27,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:02:45] 2025-06-04 09:02:27,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:02:45] 2025-06-04 09:02:27,840 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:27,840 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:27,841 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:27,891 | INFO     | [data] control thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:28,145 | INFO     | [payload] control thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:28,161 | INFO     | [job] control thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:28,549 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:28,729 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:28,746 | INFO     | [job] validate thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:28,755 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:29,061 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:29,260 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:29,269 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:29,751 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:29,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:02:45] 2025-06-04 09:02:33,847 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:37,251 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:02:45] 2025-06-04 09:02:38,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:02:45] 2025-06-04 09:02:39,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258728564544)>', '<ExcThread(monitor, started 140257810945792)>']
[2025-06-04 05:02:45] 2025-06-04 09:02:40,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:02:45] 2025-06-04 09:02:40,570 | INFO     | [monitor] control thread has ended
[2025-06-04 05:02:45] 2025-06-04 09:02:44,959 | INFO     | all workflow threads have been joined
[2025-06-04 05:02:45] 2025-06-04 09:02:44,959 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:02:45] 2025-06-04 09:02:44,960 | INFO     | traces error code: 0
[2025-06-04 05:02:45] 2025-06-04 09:02:44,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:02:45] 2025-06-04 09:02:45,068 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:02:45] 2025-06-04 09:02:45,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:02:45] 2025-06-04 09:02:45,078 [wrapper] pilotpid: 32267
[2025-06-04 05:02:45] 2025-06-04 09:02:45,082 [wrapper] Pilot exit status: 0
[2025-06-04 05:02:45] 2025-06-04 09:02:45,102 [wrapper] pandaids: 6678156223
[2025-06-04 05:02:45] 2025-06-04 09:02:45,145 [wrapper] cleanup supervisor_pilot 31523 32268
[2025-06-04 05:02:45] 2025-06-04 09:02:45,150 [wrapper] Test setup, not cleaning
[2025-06-04 05:02:45] 2025-06-04 09:02:45,156 [wrapper] apfmon messages muted
[2025-06-04 05:02:45] 2025-06-04 09:02:45,161 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:02:45] 2025-06-04 09:02:45,165 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:02:45]  *** Error codes and diagnostics ***
[2025-06-04 05:02:45]     "exeErrorCode": 0,
[2025-06-04 05:02:45]     "exeErrorDiag": "",
[2025-06-04 05:02:45]     "pilotErrorCode": 0,
[2025-06-04 05:02:45]     "pilotErrorDiag": "",
[2025-06-04 05:02:45]  *** Listing of results directory ***
[2025-06-04 05:02:45] total 385168
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:42 pilot3.tar.gz
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 19:43 queuedata.json
[2025-06-04 05:02:45] -rwx------ 1 boincer umatlas     37140 Jun  3 19:43 runpilot2-wrapper.sh
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:02:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:23 run_atlas
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:23 job.xml
[2025-06-04 05:02:45] -rw-r--r-- 2 boincer umatlas 213303256 Jun  4 03:23 EVNT.45006593._001936.pool.root.1
[2025-06-04 05:02:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:23 start_atlas.sh
[2025-06-04 05:02:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:23 shared
[2025-06-04 05:02:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 03:23 input.tar.gz
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:23 boinc_lockfile
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 03:23 pandaJob.out
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas    986745 Jun  4 03:23 agis_schedconf.cvmfs.json
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas   1603667 Jun  4 03:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:02:45] drwx------ 4 boincer umatlas      4096 Jun  4 03:23 pilot3
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas      5825 Jun  4 04:54 init_data.xml
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas 175574567 Jun  4 05:01 HITS.45006595._048210.pool.root.1
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:01 boinc_task_state.xml
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas        95 Jun  4 05:02 pilot_heartbeat.json
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas      1051 Jun  4 05:02 memory_monitor_summary.json
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas    302493 Jun  4 05:02 log.45006595._048210.job.log.tgz.1
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas      7748 Jun  4 05:02 heartbeat.json
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:02 boinc_mmap_file
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:02 wrapper_checkpoint.txt
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas      4425 Jun  4 05:02 pilotlog.txt
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas    549488 Jun  4 05:02 log.45006595._048210.job.log.1
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas       357 Jun  4 05:02 output.list
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:02 runtime_log
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas    870400 Jun  4 05:02 result.tar.gz
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 05:02 runtime_log.err
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas       658 Jun  4 05:02 8XILDmTTqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7WmKDm6MsmLn.diag
[2025-06-04 05:02:45] -rw-r--r-- 1 boincer umatlas     21554 Jun  4 05:02 stderr.txt
[2025-06-04 05:02:45] HITS file was successfully produced:
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas 175574567 Jun  4 05:01 shared/HITS.pool.root.1
[2025-06-04 05:02:45]  *** Contents of shared directory: ***
[2025-06-04 05:02:45] total 381136
[2025-06-04 05:02:45] -rw-r--r-- 2 boincer umatlas 213303256 Jun  4 03:23 ATLAS.root_0
[2025-06-04 05:02:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:23 start_atlas.sh
[2025-06-04 05:02:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 03:23 input.tar.gz
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas 175574567 Jun  4 05:01 HITS.pool.root.1
[2025-06-04 05:02:45] -rw------- 1 boincer umatlas    870400 Jun  4 05:02 result.tar.gz
05:02:46 (28681): run_atlas exited; CPU time 43431.893377
05:02:46 (28681): called boinc_finish(0)

</stderr_txt>
]]>

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