Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:20:52 (295842): wrapper (7.7.26015): starting
03:20:52 (295842): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:20:52] Arguments: --nthreads 8
[2025-06-04 03:20:52] Threads: 8
[2025-06-04 03:20:52] Checking for CVMFS
[2025-06-04 03:20:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:20:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:20:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:20:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:20:52] 2.12.6.0 2157222 22960 111580 146772 0 141 35358749 40960001 31474 16776704 0 295575756 99.784 162046355 36383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 03:20:52] CVMFS is ok
[2025-06-04 03:20:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:20:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:20:52] Further information can be found at the LHC@home message board.
[2025-06-04 03:20:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:20:52] Checking for apptainer binary...
[2025-06-04 03:20:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:20:52] Running /usr/bin/apptainer --version
[2025-06-04 03:20:52] apptainer version 1.4.1-1.el9
[2025-06-04 03:20:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:20:52] c8-6-10.aglt2.org
[2025-06-04 03:20:52] apptainer works
[2025-06-04 03:20:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:20:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:20:52] Starting ATLAS job with PandaID=6678070896
[2025-06-04 03:20:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:12:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:12:45]  mtime=0
[2025-06-04 04:12:45]  protocol_id=None
[2025-06-04 04:12:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:12:45]  replicas=None
[2025-06-04 04:12:45]  scope=mc23_13p6TeV
[2025-06-04 04:12:45]  status=None
[2025-06-04 04:12:45]  status_code=0
[2025-06-04 04:12:45]  storage_token=
[2025-06-04 04:12:45]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678070896/log.45006595._044771.job.log.tgz.1
[2025-06-04 04:12:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/34/log.45006595._044771.job.log.tgz.1
[2025-06-04 04:12:45]  workdir=None
[2025-06-04 04:12:45] ]
[2025-06-04 04:12:45] 2025-06-04 08:12:02,841 | INFO     | transferring file log.45006595._044771.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678070896/log.45006595._044771.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 04:12:45] 2025-06-04 08:12:02,841 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678070896/log.45006595._044771.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._044771.job
[2025-06-04 04:12:45] 2025-06-04 08:12:02,859 | INFO     | adding to output.list: log.45006595._044771.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/34/log.45006595._044771.job.log.tg
[2025-06-04 04:12:45] 2025-06-04 08:12:02,860 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:12:45] 2025-06-04 08:12:02,860 | INFO     | summary of transferred files:
[2025-06-04 04:12:45] 2025-06-04 08:12:02,860 | INFO     |  -- lfn=log.45006595._044771.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:12:45] 2025-06-04 08:12:02,861 | INFO     | stage-out finished correctly
[2025-06-04 04:12:45] 2025-06-04 08:12:03,095 | WARNING  | process 311094 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 04:12:45] 2025-06-04 08:12:03,095 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678070896/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:12:45] 2025-06-04 08:12:03,484 | INFO     | number of running child processes to parent process 311094: 1
[2025-06-04 04:12:45] 2025-06-04 08:12:03,485 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:12:45] 2025-06-04 08:12:05,987 | INFO     | monitor loop #225: job 0:6678070896 is in state 'finished'
[2025-06-04 04:12:45] 2025-06-04 08:12:05,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:12:45] 2025-06-04 08:12:06,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:12:45] 2025-06-04 08:12:08,489 | INFO     | monitor loop #226: job 0:6678070896 is in state 'finished'
[2025-06-04 04:12:45] 2025-06-04 08:12:08,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:12:45] 2025-06-04 08:12:08,581 | INFO     | job 6678070896 has state=finished
[2025-06-04 04:12:45] 2025-06-04 08:12:08,581 | INFO     | preparing for final server update for job 6678070896 in state='finished'
[2025-06-04 04:12:45] 2025-06-04 08:12:08,582 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:12:45] 2025-06-04 08:12:08,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:12:45] 2025-06-04 08:12:08,582 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:12:45] 2025-06-04 08:12:08,582 | INFO     | job 6678070896 has finished - writing final server update
[2025-06-04 04:12:45] 2025-06-04 08:12:08,582 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:12:45] 2025-06-04 08:12:08,601 | INFO     | executing command: lscpu
[2025-06-04 04:12:45] 2025-06-04 08:12:08,663 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:12:45] 2025-06-04 08:12:10,994 | INFO     | monitor loop #227: job 0:6678070896 is in state 'finished'
[2025-06-04 04:12:45] 2025-06-04 08:12:10,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:12:45] 2025-06-04 08:12:12,728 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 04:12:45] 2025-06-04 08:12:12,728 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678070896/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:12:45] 2025-06-04 08:12:12,729 | INFO     | extracted standard info from prmon json
[2025-06-04 04:12:45] 2025-06-04 08:12:12,729 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:12:45] 2025-06-04 08:12:12,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:12:45] 2025-06-04 08:12:12,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:12:45] 2025-06-04 08:12:12,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | sum of deviations: 5448260323.0
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | mean x: 1749023272.0
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | mean y: 2503194.2790697673
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | -- intersect: -386724584018.6651
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | intersect: -386724584018.6651
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | chi2: 0.7215594458256631
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | -- intersect: -386724584018.6651
[2025-06-04 04:12:45] 2025-06-04 08:12:12,731 | INFO     | current memory leak: 221.11 B/s (using 43 data points, chi2=0.72)
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | ..............................
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . Timing measurements:
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . get job = 0 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . initial setup = 2 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . payload setup = 5 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . stage-in = 0 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . payload execution = 3037 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . stage-out = 0 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | . log creation = 0 s
[2025-06-04 04:12:45] 2025-06-04 08:12:12,732 | INFO     | ..............................
[2025-06-04 04:12:45] 2025-06-04 08:12:13,272 | INFO     | 
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | job summary report
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | --------------------------------------------------
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | PanDA job id: 6678070896
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | task id: 45006595
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | errors: (none)
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | pilot state: finished 
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | transexitcode: 0
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | exeerrorcode: 0
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | exeerrordiag: 
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | exitcode: 0
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | exitmsg: OK
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | cpuconsumptiontime: 19543 s
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | nevents: 400
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | neventsw: 0
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | pid: 311094
[2025-06-04 04:12:45] 2025-06-04 08:12:13,273 | INFO     | pgrp: 311094
[2025-06-04 04:12:45] 2025-06-04 08:12:13,274 | INFO     | corecount: 8
[2025-06-04 04:12:45] 2025-06-04 08:12:13,274 | INFO     | event service: False
[2025-06-04 04:12:45] 2025-06-04 08:12:13,274 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 3046: 2430834, 3047: 2439775, 3050: 2439959, 3057: 2440129}
[2025-06-04 04:12:45] 2025-06-04 08:12:13,274 | INFO     | --------------------------------------------------
[2025-06-04 04:12:45] 2025-06-04 08:12:13,274 | INFO     | 
[2025-06-04 04:12:45] 2025-06-04 08:12:13,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | job 6678070896 has completed (purged errors)
[2025-06-04 04:12:45] 2025-06-04 08:12:13,294 | INFO     | overall cleanup function is called
[2025-06-04 04:12:45] 2025-06-04 08:12:14,302 | INFO     | --- collectZombieJob: --- 10, [311094]
[2025-06-04 04:12:45] 2025-06-04 08:12:14,302 | INFO     | zombie collector waiting for pid 311094
[2025-06-04 04:12:45] 2025-06-04 08:12:14,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:12:45] 2025-06-04 08:12:14,302 | INFO     | collected zombie processes
[2025-06-04 04:12:45] 2025-06-04 08:12:14,302 | INFO     | will attempt to kill all subprocesses of pid=311094
[2025-06-04 04:12:45] 2025-06-04 08:12:14,691 | INFO     | process IDs to be killed: [311094] (in reverse order)
[2025-06-04 04:12:45] 2025-06-04 08:12:14,851 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:12:45] 2025-06-04 08:12:14,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:12:45] 2025-06-04 08:12:14,874 | INFO     | did not find any defunct processes belonging to 311094
[2025-06-04 04:12:45] 2025-06-04 08:12:14,898 | INFO     | did not find any defunct processes belonging to 311094
[2025-06-04 04:12:45] 2025-06-04 08:12:14,898 | INFO     | ready for new job
[2025-06-04 04:12:45] 2025-06-04 08:12:14,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:12:45] 2025-06-04 08:12:14,900 | INFO     | **************************************
[2025-06-04 04:12:45] 2025-06-04 08:12:14,900 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:12:45] 2025-06-04 08:12:14,900 | INFO     | **************************************
[2025-06-04 04:12:45] 2025-06-04 08:12:14,900 | INFO     | 
[2025-06-04 04:12:45] 2025-06-04 08:12:14,917 | INFO     | architecture information:
[2025-06-04 04:12:45] 2025-06-04 08:12:14,918 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:12:45] 2025-06-04 08:12:14,932 | INFO     | cat /etc/os-release:
[2025-06-04 04:12:45] NAME="CentOS Linux"
[2025-06-04 04:12:45] VERSION="7 (Core)"
[2025-06-04 04:12:45] ID="centos"
[2025-06-04 04:12:45] ID_LIKE="rhel fedora"
[2025-06-04 04:12:45] VERSION_ID="7"
[2025-06-04 04:12:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:12:45] ANSI_COLOR="0;31"
[2025-06-04 04:12:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:12:45] HOME_URL="https://www.centos.org/"
[2025-06-04 04:12:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:12:45] 
[2025-06-04 04:12:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:12:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:12:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:12:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:12:45] 
[2025-06-04 04:12:45] 2025-06-04 08:12:14,933 | INFO     | **************************************
[2025-06-04 04:12:45] 2025-06-04 08:12:15,435 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 04:12:45] 2025-06-04 08:12:15,452 | INFO     | sufficient remaining disk space (171668668416 B)
[2025-06-04 04:12:45] 2025-06-04 08:12:15,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:12:45] 2025-06-04 08:12:15,452 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:12:45] 2025-06-04 08:12:15,452 | INFO     | update_server=False
[2025-06-04 04:12:45] 2025-06-04 08:12:15,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:12:45] 2025-06-04 08:12:15,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:12:45] 2025-06-04 08:12:15,453 | INFO     | aborting loop
[2025-06-04 04:12:45] 2025-06-04 08:12:15,453 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:12:45] 2025-06-04 08:12:15,454 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:12:45] 2025-06-04 08:12:15,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:12:45] 2025-06-04 08:12:15,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:12:45] 2025-06-04 08:12:15,525 | INFO     | all data control threads have been joined
[2025-06-04 04:12:45] 2025-06-04 08:12:15,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:12:45] 2025-06-04 08:12:16,307 | INFO     | all payload control threads have been joined
[2025-06-04 04:12:45] 2025-06-04 08:12:16,458 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:16,458 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:16,527 | INFO     | [data] control thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:16,580 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:16,907 | INFO     | all job control threads have been joined
[2025-06-04 04:12:45] 2025-06-04 08:12:16,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:12:45] 2025-06-04 08:12:17,087 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,312 | INFO     | [payload] control thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,460 | INFO     | [job] validate thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,488 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,521 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,534 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:12:45] 2025-06-04 08:12:17,811 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,913 | INFO     | [job] control thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:17,938 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:18,806 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:20,928 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:26,452 | INFO     | job.realtimelogging is not enabled
[2025-06-04 04:12:45] 2025-06-04 08:12:27,457 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:12:45] 2025-06-04 08:12:27,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831761540928)>', '<ExcThread(monitor, started 139830956640000)>']
[2025-06-04 04:12:45] 2025-06-04 08:12:28,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:12:45] 2025-06-04 08:12:28,516 | INFO     | [monitor] control thread has ended
[2025-06-04 04:12:45] 2025-06-04 08:12:32,790 | INFO     | all workflow threads have been joined
[2025-06-04 04:12:45] 2025-06-04 08:12:32,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:12:45] 2025-06-04 08:12:32,791 | INFO     | traces error code: 0
[2025-06-04 04:12:45] 2025-06-04 08:12:32,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:12:45] 2025-06-04 08:12:32,913 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:12:45] 2025-06-04 08:12:32,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:12:45] 2025-06-04 08:12:32,919 [wrapper] pilotpid: 299693
[2025-06-04 04:12:45] 2025-06-04 08:12:32,921 [wrapper] Pilot exit status: 0
[2025-06-04 04:12:45] 2025-06-04 08:12:32,931 [wrapper] pandaids: 6678070896
[2025-06-04 04:12:45] 2025-06-04 08:12:33,040 [wrapper] cleanup supervisor_pilot  746480 299694
[2025-06-04 04:12:45] 2025-06-04 08:12:33,042 [wrapper] Test setup, not cleaning
[2025-06-04 04:12:45] 2025-06-04 08:12:33,045 [wrapper] apfmon messages muted
[2025-06-04 04:12:45] 2025-06-04 08:12:33,047 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:12:45] 2025-06-04 08:12:33,050 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:12:45]  *** Error codes and diagnostics ***
[2025-06-04 04:12:45]     "exeErrorCode": 0,
[2025-06-04 04:12:45]     "exeErrorDiag": "",
[2025-06-04 04:12:45]     "pilotErrorCode": 0,
[2025-06-04 04:12:45]     "pilotErrorDiag": "",
[2025-06-04 04:12:45]  *** Listing of results directory ***
[2025-06-04 04:12:45] total 387280
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 16:09 pilot3.tar.gz
[2025-06-04 04:12:45] -rwx------. 1 boincer umatlas     37140 Jun  3 16:22 runpilot2-wrapper.sh
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 16:22 queuedata.json
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas       100 Jun  4 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:12:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 03:20 run_atlas
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas       105 Jun  4 03:20 job.xml
[2025-06-04 04:12:45] -rw-r--r--. 2 boincer umatlas 217945981 Jun  4 03:20 EVNT.45006593._001795.pool.root.1
[2025-06-04 04:12:45] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 03:20 input.tar.gz
[2025-06-04 04:12:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 03:20 start_atlas.sh
[2025-06-04 04:12:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 03:20 shared
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas         0 Jun  4 03:20 boinc_lockfile
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 03:20 pandaJob.out
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas    986745 Jun  4 03:20 agis_schedconf.cvmfs.json
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas   1603667 Jun  4 03:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:12:45] drwx------. 4 boincer umatlas      4096 Jun  4 03:21 pilot3
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 04:10 init_data.xml
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas 173583758 Jun  4 04:11 HITS.45006595._044771.pool.root.1
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas       529 Jun  4 04:11 boinc_task_state.xml
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas      1044 Jun  4 04:11 memory_monitor_summary.json
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas    284924 Jun  4 04:12 log.45006595._044771.job.log.tgz.1
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas        95 Jun  4 04:12 pilot_heartbeat.json
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas      7692 Jun  4 04:12 heartbeat.json
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas      4549 Jun  4 04:12 pilotlog.txt
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas    316032 Jun  4 04:12 log.45006595._044771.job.log.1
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas       357 Jun  4 04:12 output.list
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas       620 Jun  4 04:12 runtime_log
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas    624640 Jun  4 04:12 result.tar.gz
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas       649 Jun  4 04:12 VO5LDmvKng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu2lKDmVrIxGn.diag
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 04:12 runtime_log.err
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas        27 Jun  4 04:12 wrapper_checkpoint.txt
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 04:12 boinc_mmap_file
[2025-06-04 04:12:45] -rw-r--r--. 1 boincer umatlas     21666 Jun  4 04:12 stderr.txt
[2025-06-04 04:12:45] HITS file was successfully produced:
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas 173583758 Jun  4 04:11 shared/HITS.pool.root.1
[2025-06-04 04:12:45]  *** Contents of shared directory: ***
[2025-06-04 04:12:45] total 383492
[2025-06-04 04:12:45] -rw-r--r--. 2 boincer umatlas 217945981 Jun  4 03:20 ATLAS.root_0
[2025-06-04 04:12:45] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 03:20 input.tar.gz
[2025-06-04 04:12:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 03:20 start_atlas.sh
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas 173583758 Jun  4 04:11 HITS.pool.root.1
[2025-06-04 04:12:45] -rw-------. 1 boincer umatlas    624640 Jun  4 04:12 result.tar.gz
04:12:46 (295842): run_atlas exited; CPU time 19616.013447
04:12:46 (295842): called boinc_finish(0)

</stderr_txt>
]]>

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