Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:06:47 (2164484): wrapper (7.7.26015): starting
04:06:47 (2164484): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:06:47] Arguments: --nthreads 8
[2025-06-04 04:06:47] Threads: 8
[2025-06-04 04:06:47] Checking for CVMFS
[2025-06-04 04:06:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:06:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:06:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:06:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:06:48] 2.12.6.0 34999 38386 520616 146772 3 386 19620152 32935937 16491 16776704 1 297876148 99.614 298203853 22522 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 04:06:48] CVMFS is ok
[2025-06-04 04:06:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:06:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:06:48] Further information can be found at the LHC@home message board.
[2025-06-04 04:06:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:06:48] Checking for apptainer binary...
[2025-06-04 04:06:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:06:48] Running /usr/bin/apptainer --version
[2025-06-04 04:06:48] apptainer version 1.4.1-1.el9
[2025-06-04 04:06:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:06:48] c7-2-16.aglt2.org
[2025-06-04 04:06:48] apptainer works
[2025-06-04 04:06:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:06:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:06:48] Starting ATLAS job with PandaID=6678285520
[2025-06-04 04:06:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:57:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:57:02]  filetype=log
[2025-06-04 04:57:02]  guid=aba50b87-14da-4fab-8e68-84e07bd1c7da
[2025-06-04 04:57:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 04:57:02]  is_altstaged=None
[2025-06-04 04:57:02]  is_tar=False
[2025-06-04 04:57:02]  lfn=log.45006595._050729.job.log.tgz.1
[2025-06-04 04:57:02]  mtime=0
[2025-06-04 04:57:02]  protocol_id=None
[2025-06-04 04:57:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:57:02]  replicas=None
[2025-06-04 04:57:02]  scope=mc23_13p6TeV
[2025-06-04 04:57:02]  status=None
[2025-06-04 04:57:02]  status_code=0
[2025-06-04 04:57:02]  storage_token=
[2025-06-04 04:57:02]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678285520/log.45006595._050729.job.log.tgz.1
[2025-06-04 04:57:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/8a/log.45006595._050729.job.log.tgz.1
[2025-06-04 04:57:02]  workdir=None
[2025-06-04 04:57:02] ]
[2025-06-04 04:57:02] 2025-06-04 08:56:36,528 | INFO     | transferring file log.45006595._050729.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678285520/log.45006595._050729.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 04:57:02] 2025-06-04 08:56:36,528 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678285520/log.45006595._050729.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._050729.job
[2025-06-04 04:57:02] 2025-06-04 08:56:36,543 | INFO     | adding to output.list: log.45006595._050729.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/8a/log.45006595._050729.job.log.tg
[2025-06-04 04:57:02] 2025-06-04 08:56:36,544 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:57:02] 2025-06-04 08:56:36,544 | INFO     | summary of transferred files:
[2025-06-04 04:57:02] 2025-06-04 08:56:36,544 | INFO     |  -- lfn=log.45006595._050729.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:57:02] 2025-06-04 08:56:36,544 | INFO     | stage-out finished correctly
[2025-06-04 04:57:02] 2025-06-04 08:56:36,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:57:02] 2025-06-04 08:56:39,346 | INFO     | job 6678285520 has state=finished
[2025-06-04 04:57:02] 2025-06-04 08:56:39,346 | INFO     | preparing for final server update for job 6678285520 in state='finished'
[2025-06-04 04:57:02] 2025-06-04 08:56:39,347 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:57:02] 2025-06-04 08:56:39,347 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:57:02] 2025-06-04 08:56:39,347 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:57:02] 2025-06-04 08:56:39,347 | INFO     | job 6678285520 has finished - writing final server update
[2025-06-04 04:57:02] 2025-06-04 08:56:39,347 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:57:02] 2025-06-04 08:56:39,365 | INFO     | executing command: lscpu
[2025-06-04 04:57:02] 2025-06-04 08:56:39,441 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:57:02] 2025-06-04 08:56:39,629 | WARNING  | process 2174769 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 04:57:02] 2025-06-04 08:56:39,630 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678285520/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:57:02] 2025-06-04 08:56:39,938 | INFO     | number of running child processes to parent process 2174769: 1
[2025-06-04 04:57:02] 2025-06-04 08:56:39,938 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678285520/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | INFO     | extracted standard info from prmon json
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:57:02] 2025-06-04 08:56:42,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:57:02] 2025-06-04 08:56:42,081 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:57:02] 2025-06-04 08:56:42,081 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 04:57:02] 2025-06-04 08:56:42,081 | INFO     | sum of deviations: 3935054703.5
[2025-06-04 04:57:02] 2025-06-04 08:56:42,081 | INFO     | mean x: 1749025996.5
[2025-06-04 04:57:02] 2025-06-04 08:56:42,081 | INFO     | mean y: 2135730.0714285714
[2025-06-04 04:57:02] 2025-06-04 08:56:42,081 | INFO     | -- intersect: -299753261890.6788
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | intersect: -299753261890.6788
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | chi2: 0.5998462969993523
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | -- intersect: -299753261890.6788
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | current memory leak: 171.38 B/s (using 42 data points, chi2=0.60)
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | ..............................
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . Timing measurements:
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . get job = 0 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . initial setup = 2 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . payload setup = 5 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . stage-in = 0 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . payload execution = 2955 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . stage-out = 0 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | . log creation = 0 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,082 | INFO     | ..............................
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | 
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | job summary report
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | --------------------------------------------------
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | PanDA job id: 6678285520
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | task id: 45006595
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | errors: (none)
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | pilot state: finished 
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | transexitcode: 0
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | exeerrorcode: 0
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | exeerrordiag: 
[2025-06-04 04:57:02] 2025-06-04 08:56:42,122 | INFO     | exitcode: 0
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | exitmsg: OK
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | cpuconsumptiontime: 19019 s
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | nevents: 400
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | neventsw: 0
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | pid: 2174769
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | pgrp: 2174769
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | corecount: 8
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | event service: False
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | sizes: {0: 2404962, 1: 2405161, 4: 2405367, 11: 2405395, 2964: 2430705, 2965: 2439830, 2970: 2439944}
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | --------------------------------------------------
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | 
[2025-06-04 04:57:02] 2025-06-04 08:56:42,123 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 04:57:02] 2025-06-04 08:56:42,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,141 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | job 6678285520 has completed (purged errors)
[2025-06-04 04:57:02] 2025-06-04 08:56:42,142 | INFO     | overall cleanup function is called
[2025-06-04 04:57:02] 2025-06-04 08:56:43,149 | INFO     | --- collectZombieJob: --- 10, [2174769]
[2025-06-04 04:57:02] 2025-06-04 08:56:43,150 | INFO     | zombie collector waiting for pid 2174769
[2025-06-04 04:57:02] 2025-06-04 08:56:43,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:57:02] 2025-06-04 08:56:43,150 | INFO     | collected zombie processes
[2025-06-04 04:57:02] 2025-06-04 08:56:43,150 | INFO     | will attempt to kill all subprocesses of pid=2174769
[2025-06-04 04:57:02] 2025-06-04 08:56:43,401 | INFO     | process IDs to be killed: [2174769] (in reverse order)
[2025-06-04 04:57:02] 2025-06-04 08:56:43,483 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:57:02] 2025-06-04 08:56:43,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:57:02] 2025-06-04 08:56:43,493 | INFO     | did not find any defunct processes belonging to 2174769
[2025-06-04 04:57:02] 2025-06-04 08:56:43,500 | INFO     | did not find any defunct processes belonging to 2174769
[2025-06-04 04:57:02] 2025-06-04 08:56:43,500 | INFO     | ready for new job
[2025-06-04 04:57:02] 2025-06-04 08:56:43,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:57:02] 2025-06-04 08:56:43,501 | INFO     | **************************************
[2025-06-04 04:57:02] 2025-06-04 08:56:43,501 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:57:02] 2025-06-04 08:56:43,501 | INFO     | **************************************
[2025-06-04 04:57:02] 2025-06-04 08:56:43,501 | INFO     | 
[2025-06-04 04:57:02] 2025-06-04 08:56:43,517 | INFO     | architecture information:
[2025-06-04 04:57:02] 2025-06-04 08:56:43,517 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:57:02] 2025-06-04 08:56:43,528 | INFO     | cat /etc/os-release:
[2025-06-04 04:57:02] NAME="CentOS Linux"
[2025-06-04 04:57:02] VERSION="7 (Core)"
[2025-06-04 04:57:02] ID="centos"
[2025-06-04 04:57:02] ID_LIKE="rhel fedora"
[2025-06-04 04:57:02] VERSION_ID="7"
[2025-06-04 04:57:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:57:02] ANSI_COLOR="0;31"
[2025-06-04 04:57:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:57:02] HOME_URL="https://www.centos.org/"
[2025-06-04 04:57:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:57:02] 
[2025-06-04 04:57:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:57:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:57:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:57:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:57:02] 
[2025-06-04 04:57:02] 2025-06-04 08:56:43,528 | INFO     | **************************************
[2025-06-04 04:57:02] 2025-06-04 08:56:44,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | INFO     | sufficient remaining disk space (75432460288 B)
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | INFO     | update_server=False
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:57:02] 2025-06-04 08:56:44,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:57:02] 2025-06-04 08:56:44,045 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:57:02] 2025-06-04 08:56:44,045 | INFO     | aborting loop
[2025-06-04 04:57:02] 2025-06-04 08:56:44,045 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:57:02] 2025-06-04 08:56:44,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:57:02] 2025-06-04 08:56:44,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:57:02] 2025-06-04 08:56:44,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:57:02] 2025-06-04 08:56:45,049 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,050 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,050 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,127 | INFO     | all data control threads have been joined
[2025-06-04 04:57:02] 2025-06-04 08:56:45,181 | INFO     | [job] validate thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,300 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,340 | INFO     | all job control threads have been joined
[2025-06-04 04:57:02] 2025-06-04 08:56:45,469 | INFO     | all payload control threads have been joined
[2025-06-04 04:57:02] 2025-06-04 08:56:45,551 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,566 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:45,864 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:46,092 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:46,133 | INFO     | [data] control thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:46,344 | INFO     | [job] control thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:46,474 | INFO     | [payload] control thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:46,510 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:46,608 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:47,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:57:02] 2025-06-04 08:56:51,162 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:54,304 | INFO     | job.realtimelogging is not enabled
[2025-06-04 04:57:02] 2025-06-04 08:56:55,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:57:02] 2025-06-04 08:56:56,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464412579648)>', '<ExcThread(monitor, started 140463927445248)>']
[2025-06-04 04:57:02] 2025-06-04 08:56:57,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:57:02] 2025-06-04 08:56:57,098 | INFO     | [monitor] control thread has ended
[2025-06-04 04:57:02] 2025-06-04 08:57:01,988 | INFO     | all workflow threads have been joined
[2025-06-04 04:57:02] 2025-06-04 08:57:01,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:57:02] 2025-06-04 08:57:01,988 | INFO     | traces error code: 0
[2025-06-04 04:57:02] 2025-06-04 08:57:01,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:57:02] 2025-06-04 08:57:02,096 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:57:02] 2025-06-04 08:57:02,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:57:02] 2025-06-04 08:57:02,101 [wrapper] pilotpid: 2168150
[2025-06-04 04:57:02] 2025-06-04 08:57:02,103 [wrapper] Pilot exit status: 0
[2025-06-04 04:57:02] 2025-06-04 08:57:02,111 [wrapper] pandaids: 6678285520
[2025-06-04 04:57:02] 2025-06-04 08:57:02,175 [wrapper] cleanup supervisor_pilot 2389193 2168151
[2025-06-04 04:57:02] 2025-06-04 08:57:02,178 [wrapper] Test setup, not cleaning
[2025-06-04 04:57:02] 2025-06-04 08:57:02,180 [wrapper] apfmon messages muted
[2025-06-04 04:57:02] 2025-06-04 08:57:02,182 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:57:02] 2025-06-04 08:57:02,184 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:57:02]  *** Error codes and diagnostics ***
[2025-06-04 04:57:02]     "exeErrorCode": 0,
[2025-06-04 04:57:02]     "exeErrorDiag": "",
[2025-06-04 04:57:02]     "pilotErrorCode": 0,
[2025-06-04 04:57:02]     "pilotErrorDiag": "",
[2025-06-04 04:57:02]  *** Listing of results directory ***
[2025-06-04 04:57:02] total 394740
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 22:41 queuedata.json
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:41 pilot3.tar.gz
[2025-06-04 04:57:02] -rwx------. 1 boincer umatlas     37140 Jun  3 22:43 runpilot2-wrapper.sh
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas       100 Jun  4 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:57:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 04:06 run_atlas
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas       105 Jun  4 04:06 job.xml
[2025-06-04 04:57:02] -rw-r--r--. 2 boincer umatlas 216911482 Jun  4 04:06 EVNT.45006593._002032.pool.root.1
[2025-06-04 04:57:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 04:06 shared
[2025-06-04 04:57:02] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 04:06 input.tar.gz
[2025-06-04 04:57:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:06 start_atlas.sh
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas         0 Jun  4 04:06 boinc_lockfile
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 04:06 pandaJob.out
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas    986745 Jun  4 04:06 agis_schedconf.cvmfs.json
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas   1603667 Jun  4 04:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:57:02] drwx------. 4 boincer umatlas      4096 Jun  4 04:06 pilot3
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 04:55 init_data.xml
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas        95 Jun  4 04:56 pilot_heartbeat.json
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas 182240999 Jun  4 04:56 HITS.45006595._050729.pool.root.1
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas       529 Jun  4 04:56 boinc_task_state.xml
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas      1025 Jun  4 04:56 memory_monitor_summary.json
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas    302069 Jun  4 04:56 log.45006595._050729.job.log.tgz.1
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas      7680 Jun  4 04:56 heartbeat.json
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 04:57 boinc_mmap_file
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas        27 Jun  4 04:57 wrapper_checkpoint.txt
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas      4548 Jun  4 04:57 pilotlog.txt
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas    312368 Jun  4 04:57 log.45006595._050729.job.log.1
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas       357 Jun  4 04:57 output.list
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas       620 Jun  4 04:57 runtime_log
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas    634880 Jun  4 04:57 result.tar.gz
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas       649 Jun  4 04:57 TKRLDmIHtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2umKDm35KApm.diag
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 04:57 runtime_log.err
[2025-06-04 04:57:02] -rw-r--r--. 1 boincer umatlas     21207 Jun  4 04:57 stderr.txt
[2025-06-04 04:57:02] HITS file was successfully produced:
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas 182240999 Jun  4 04:56 shared/HITS.pool.root.1
[2025-06-04 04:57:02]  *** Contents of shared directory: ***
[2025-06-04 04:57:02] total 390940
[2025-06-04 04:57:02] -rw-r--r--. 2 boincer umatlas 216911482 Jun  4 04:06 ATLAS.root_0
[2025-06-04 04:57:02] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 04:06 input.tar.gz
[2025-06-04 04:57:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:06 start_atlas.sh
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas 182240999 Jun  4 04:56 HITS.pool.root.1
[2025-06-04 04:57:02] -rw-------. 1 boincer umatlas    634880 Jun  4 04:57 result.tar.gz
04:57:03 (2164484): run_atlas exited; CPU time 19100.540049
04:57:03 (2164484): called boinc_finish(0)

</stderr_txt>
]]>

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