Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:36 (890198): wrapper (7.7.26015): starting
18:04:36 (890198): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 18:04:36] Arguments: --nthreads 4
[2025-06-05 18:04:36] Threads: 4
[2025-06-05 18:04:36] Checking for CVMFS
[2025-06-05 18:04:36] No cvmfs_config command found, will try listing directly
[2025-06-05 18:04:36] CVMFS is ok
[2025-06-05 18:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 18:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 18:04:36] Further information can be found at the LHC@home message board.
[2025-06-05 18:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:04:36] Checking for apptainer binary...
[2025-06-05 18:04:36] which: no apptainer in ((null))
[2025-06-05 18:04:36] apptainer is not installed, using version from CVMFS
[2025-06-05 18:04:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:04:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 18:04:36] apptainer works
[2025-06-05 18:04:36] Set ATHENA_PROC_NUMBER=4
[2025-06-05 18:04:36] Set ATHENA_CORE_NUMBER=4
[2025-06-05 18:04:37] Starting ATLAS job with PandaID=6678285500
[2025-06-05 18:04:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:15:40]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:15:40] 2025-06-05 18:14:49,582 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6678285500/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,583 | INFO     | extracted standard info from prmon json
[2025-06-05 20:15:40] 2025-06-05 18:14:49,583 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 20:15:40] 2025-06-05 18:14:49,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:15:40] 2025-06-05 18:14:49,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:15:40] 2025-06-05 18:14:49,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:15:40] 2025-06-05 18:14:49,587 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:15:40] 2025-06-05 18:14:49,587 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,588 | INFO     | sum of deviations: 8643143161.5
[2025-06-05 20:15:40] 2025-06-05 18:14:49,588 | INFO     | mean x: 1749143393.5
[2025-06-05 20:15:40] 2025-06-05 18:14:49,588 | INFO     | mean y: 2275245.8671875
[2025-06-05 20:15:40] 2025-06-05 18:14:49,588 | INFO     | -- intersect: -23247314599.440754
[2025-06-05 20:15:40] 2025-06-05 18:14:49,588 | INFO     | intersect: -23247314599.440754
[2025-06-05 20:15:40] 2025-06-05 18:14:49,588 | INFO     | chi2: 2.2663051936683476
[2025-06-05 20:15:40] 2025-06-05 18:14:49,589 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,589 | INFO     | sum of deviations: 15585213239.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,589 | INFO     | mean x: 1749143241.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,589 | INFO     | mean y: 2289201.2926829266
[2025-06-05 20:15:40] 2025-06-05 18:14:49,590 | INFO     | -- intersect: -47244584164.974144
[2025-06-05 20:15:40] 2025-06-05 18:14:49,590 | INFO     | intersect: -47244584164.974144
[2025-06-05 20:15:40] 2025-06-05 18:14:49,590 | INFO     | chi2: 1.5636724770339077
[2025-06-05 20:15:40] 2025-06-05 18:14:49,590 | INFO     | current chi2=1.5636724770339077 (change=31.00344642890421 %)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,590 | INFO     | sum of square deviations: 509440249.5
[2025-06-05 20:15:40] 2025-06-05 18:14:49,591 | INFO     | sum of deviations: 14889889245.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,591 | INFO     | mean x: 1749143088.5
[2025-06-05 20:15:40] 2025-06-05 18:14:49,591 | INFO     | mean y: 2287630.1016949154
[2025-06-05 20:15:40] 2025-06-05 18:14:49,591 | INFO     | -- intersect: -51121562295.349144
[2025-06-05 20:15:40] 2025-06-05 18:14:49,591 | INFO     | intersect: -51121562295.349144
[2025-06-05 20:15:40] 2025-06-05 18:14:49,592 | INFO     | chi2: 1.566326180168255
[2025-06-05 20:15:40] 2025-06-05 18:14:49,592 | INFO     | current chi2=1.566326180168255 (change=-0.1697096529690907 %)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,592 | INFO     | right removable region: 117
[2025-06-05 20:15:40] 2025-06-05 18:14:49,592 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | sum of deviations: -9828531914.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | mean x: 1749143546.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | mean y: 2313007.9105691058
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | -- intersect: 29797701532.162296
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | intersect: 29797701532.162296
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | chi2: 0.7412708801643927
[2025-06-05 20:15:40] 2025-06-05 18:14:49,593 | INFO     | current chi2=0.7412708801643927 (change=67.29165682383065 %)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,594 | INFO     | sum of square deviations: 509440249.5
[2025-06-05 20:15:40] 2025-06-05 18:14:49,594 | INFO     | sum of deviations: -8750892799.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,594 | INFO     | mean x: 1749143698.5
[2025-06-05 20:15:40] 2025-06-05 18:14:49,594 | INFO     | mean y: 2310560.440677966
[2025-06-05 20:15:40] 2025-06-05 18:14:49,594 | INFO     | -- intersect: 30048167774.59446
[2025-06-05 20:15:40] 2025-06-05 18:14:49,595 | INFO     | intersect: 30048167774.59446
[2025-06-05 20:15:40] 2025-06-05 18:14:49,595 | INFO     | chi2: 0.7412774499345839
[2025-06-05 20:15:40] 2025-06-05 18:14:49,595 | INFO     | current chi2=0.7412774499345839 (change=-0.0008862846723108065 %)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,595 | INFO     | left removable region: 20
[2025-06-05 20:15:40] 2025-06-05 18:14:49,595 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,595 | INFO     | sum of deviations: -177509268.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | mean x: 1749143668.0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | mean y: 2322684.2577319588
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | -- intersect: 1099556158.0594342
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | intersect: 1099556158.0594342
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | chi2: 0.0026393946482780764
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | -- intersect: 1099556158.0594342
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | current memory leak: -0.63 B/s (using 97 data points, chi2=0.00)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,596 | INFO     | ..............................
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . Timing measurements:
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . get job = 0 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . initial setup = 1 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . payload setup = 8 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . stage-in = 0 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . payload execution = 7763 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . stage-out = 0 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | . log creation = 0 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,597 | INFO     | ..............................
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | 
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | job summary report
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | --------------------------------------------------
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | PanDA job id: 6678285500
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | task id: 45006595
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | errors: (none)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:15:40] 2025-06-05 18:14:49,695 | INFO     | pilot state: finished 
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | transexitcode: 0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | exeerrorcode: 0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | exeerrordiag: 
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | exitcode: 0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | exitmsg: OK
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | cpuconsumptiontime: 29501 s
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | nevents: 400
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | neventsw: 0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | pid: 902452
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | pgrp: 902452
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | corecount: 4
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | event service: False
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | sizes: {0: 2397182, 1: 2397381, 7: 2397587, 12: 2397615, 7775: 2425272, 7776: 2434235, 7778: 2434419, 7784: 2434589}
[2025-06-05 20:15:40] 2025-06-05 18:14:49,696 | INFO     | --------------------------------------------------
[2025-06-05 20:15:40] 2025-06-05 18:14:49,697 | INFO     | 
[2025-06-05 20:15:40] 2025-06-05 18:14:49,697 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2025-06-05 20:15:40] 2025-06-05 18:14:49,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:15:40] 2025-06-05 18:14:49,729 | INFO     | job 6678285500 has completed (purged errors)
[2025-06-05 20:15:40] 2025-06-05 18:14:49,729 | INFO     | overall cleanup function is called
[2025-06-05 20:15:40] 2025-06-05 18:14:50,738 | INFO     | --- collectZombieJob: --- 10, [902452]
[2025-06-05 20:15:40] 2025-06-05 18:14:50,738 | INFO     | zombie collector waiting for pid 902452
[2025-06-05 20:15:40] 2025-06-05 18:14:50,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:15:40] 2025-06-05 18:14:50,738 | INFO     | collected zombie processes
[2025-06-05 20:15:40] 2025-06-05 18:14:50,738 | INFO     | will attempt to kill all subprocesses of pid=902452
[2025-06-05 20:15:40] 2025-06-05 18:14:51,431 | INFO     | process IDs to be killed: [902452] (in reverse order)
[2025-06-05 20:15:40] 2025-06-05 18:14:51,651 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:15:40] 2025-06-05 18:14:51,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:15:40] 2025-06-05 18:14:51,677 | INFO     | did not find any defunct processes belonging to 902452
[2025-06-05 20:15:40] 2025-06-05 18:14:51,701 | INFO     | did not find any defunct processes belonging to 902452
[2025-06-05 20:15:40] 2025-06-05 18:14:51,702 | INFO     | ready for new job
[2025-06-05 20:15:40] 2025-06-05 18:14:51,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:15:40] 2025-06-05 18:14:51,703 | INFO     | **************************************
[2025-06-05 20:15:40] 2025-06-05 18:14:51,704 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:15:40] 2025-06-05 18:14:51,704 | INFO     | **************************************
[2025-06-05 20:15:40] 2025-06-05 18:14:51,704 | INFO     | 
[2025-06-05 20:15:40] 2025-06-05 18:14:51,711 | INFO     | architecture information:
[2025-06-05 20:15:40] 2025-06-05 18:14:51,712 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:15:40] 2025-06-05 18:14:51,731 | INFO     | cat /etc/os-release:
[2025-06-05 20:15:40] NAME="CentOS Linux"
[2025-06-05 20:15:40] VERSION="7 (Core)"
[2025-06-05 20:15:40] ID="centos"
[2025-06-05 20:15:40] ID_LIKE="rhel fedora"
[2025-06-05 20:15:40] VERSION_ID="7"
[2025-06-05 20:15:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:15:40] ANSI_COLOR="0;31"
[2025-06-05 20:15:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:15:40] HOME_URL="https://www.centos.org/"
[2025-06-05 20:15:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:15:40] 
[2025-06-05 20:15:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:15:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:15:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:15:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:15:40] 
[2025-06-05 20:15:40] 2025-06-05 18:14:51,731 | INFO     | **************************************
[2025-06-05 20:15:40] 2025-06-05 18:14:52,234 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2025-06-05 20:15:40] 2025-06-05 18:14:52,258 | INFO     | sufficient remaining disk space (3301505499136 B)
[2025-06-05 20:15:40] 2025-06-05 18:14:52,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:15:40] 2025-06-05 18:14:52,259 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:15:40] 2025-06-05 18:14:52,259 | INFO     | update_server=False
[2025-06-05 20:15:40] 2025-06-05 18:14:52,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:15:40] 2025-06-05 18:14:52,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:15:40] 2025-06-05 18:14:52,260 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:15:40] 2025-06-05 18:14:52,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:15:40] 2025-06-05 18:14:52,263 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:15:40] 2025-06-05 18:14:52,263 | INFO     | aborting loop
[2025-06-05 20:15:40] 2025-06-05 18:14:52,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:15:40] 2025-06-05 18:14:52,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:15:40] 2025-06-05 18:14:53,123 | INFO     | all data control threads have been joined
[2025-06-05 20:15:40] 2025-06-05 18:14:53,147 | INFO     | all payload control threads have been joined
[2025-06-05 20:15:40] 2025-06-05 18:14:53,265 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,266 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,344 | INFO     | all job control threads have been joined
[2025-06-05 20:15:40] 2025-06-05 18:14:53,410 | INFO     | [job] validate thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,467 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,649 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,723 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,834 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:53,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:15:40] 2025-06-05 18:14:54,129 | INFO     | [data] control thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:54,152 | INFO     | [payload] control thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:54,268 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:54,292 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:54,349 | INFO     | [job] control thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:54,693 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:54,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:15:40] 2025-06-05 18:14:55,711 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:57,854 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:15:40] 2025-06-05 18:14:58,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23355574761280)>', '<ExcThread(monitor, started 23355340068608)>']
[2025-06-05 20:15:40] 2025-06-05 18:14:59,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:15:40] 2025-06-05 18:14:59,300 | INFO     | [monitor] control thread has ended
[2025-06-05 20:15:40] 2025-06-05 18:15:03,404 | INFO     | all workflow threads have been joined
[2025-06-05 20:15:40] 2025-06-05 18:15:03,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:15:40] 2025-06-05 18:15:03,405 | INFO     | traces error code: 0
[2025-06-05 20:15:40] 2025-06-05 18:15:03,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:15:40] 2025-06-05 18:15:03,554 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:15:40] 2025-06-05 18:15:03,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:15:40] 2025-06-05 18:15:03,561 [wrapper] pilotpid: 894257
[2025-06-05 20:15:40] 2025-06-05 18:15:03,564 [wrapper] Pilot exit status: 0
[2025-06-05 20:15:40] 2025-06-05 18:15:03,580 [wrapper] pandaids: 6678285500
[2025-06-05 20:15:40] 2025-06-05 18:15:03,723 [wrapper] cleanup supervisor_pilot 1330088 894258
[2025-06-05 20:15:40] 2025-06-05 18:15:03,726 [wrapper] Test setup, not cleaning
[2025-06-05 20:15:40] 2025-06-05 18:15:03,730 [wrapper] apfmon messages muted
[2025-06-05 20:15:40] 2025-06-05 18:15:03,733 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:15:40] 2025-06-05 18:15:03,737 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:15:40]  *** Error codes and diagnostics ***
[2025-06-05 20:15:40]     "exeErrorCode": 0,
[2025-06-05 20:15:40]     "exeErrorDiag": "",
[2025-06-05 20:15:40]     "pilotErrorCode": 0,
[2025-06-05 20:15:40]     "pilotErrorDiag": "",
[2025-06-05 20:15:40]  *** Listing of results directory ***
[2025-06-05 20:15:40] total 393068
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:27 queuedata.json
[2025-06-05 20:15:40] -rwx------ 1 boinc boinc     37140 Jun  4 04:28 runpilot2-wrapper.sh
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc       100 Jun  5 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:15:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 18:04 run_atlas
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc       105 Jun  5 18:04 job.xml
[2025-06-05 20:15:40] -rw-r--r-- 2 boinc boinc 216911482 Jun  5 18:04 EVNT.45006593._002032.pool.root.1
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc      6684 Jun  5 18:04 init_data.xml
[2025-06-05 20:15:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 18:04 start_atlas.sh
[2025-06-05 20:15:40] drwxrwx--x 2 boinc boinc      4096 Jun  5 18:04 shared
[2025-06-05 20:15:40] -rw-r--r-- 2 boinc boinc    508880 Jun  5 18:04 input.tar.gz
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc         0 Jun  5 18:04 boinc_lockfile
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc      2525 Jun  5 18:04 pandaJob.out
[2025-06-05 20:15:40] -rw------- 1 boinc boinc    983229 Jun  5 18:04 agis_schedconf.cvmfs.json
[2025-06-05 20:15:40] -rw------- 1 boinc boinc   1598969 Jun  5 18:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:15:40] drwx------ 4 boinc boinc      4096 Jun  5 18:04 pilot3
[2025-06-05 20:15:40] -rw------- 1 boinc boinc        95 Jun  5 20:13 pilot_heartbeat.json
[2025-06-05 20:15:40] -rw------- 1 boinc boinc 179756423 Jun  5 20:14 HITS.45006595._050709.pool.root.1
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc       529 Jun  5 20:14 boinc_task_state.xml
[2025-06-05 20:15:40] -rw------- 1 boinc boinc      1029 Jun  5 20:14 memory_monitor_summary.json
[2025-06-05 20:15:40] -rw------- 1 boinc boinc    263186 Jun  5 20:14 log.45006595._050709.job.log.tgz.1
[2025-06-05 20:15:40] -rw------- 1 boinc boinc      7693 Jun  5 20:14 heartbeat.json
[2025-06-05 20:15:40] -rw------- 1 boinc boinc      4487 Jun  5 20:15 pilotlog.txt
[2025-06-05 20:15:40] -rw------- 1 boinc boinc    736716 Jun  5 20:15 log.45006595._050709.job.log.1
[2025-06-05 20:15:40] -rw------- 1 boinc boinc       357 Jun  5 20:15 output.list
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc       620 Jun  5 20:15 runtime_log
[2025-06-05 20:15:40] -rw------- 1 boinc boinc   1024000 Jun  5 20:15 result.tar.gz
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc      9025 Jun  5 20:15 runtime_log.err
[2025-06-05 20:15:40] -rw------- 1 boinc boinc       662 Jun  5 20:15 4NxLDmJ3sg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpumKDmFmQ8Dm.diag
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc        27 Jun  5 20:15 wrapper_checkpoint.txt
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc      8192 Jun  5 20:15 boinc_mmap_file
[2025-06-05 20:15:40] -rw-r--r-- 1 boinc boinc     20623 Jun  5 20:15 stderr.txt
[2025-06-05 20:15:40] HITS file was successfully produced:
[2025-06-05 20:15:40] -rw------- 1 boinc boinc 179756423 Jun  5 20:14 shared/HITS.pool.root.1
[2025-06-05 20:15:40]  *** Contents of shared directory: ***
[2025-06-05 20:15:40] total 388896
[2025-06-05 20:15:40] -rw-r--r-- 2 boinc boinc 216911482 Jun  5 18:04 ATLAS.root_0
[2025-06-05 20:15:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 18:04 start_atlas.sh
[2025-06-05 20:15:40] -rw-r--r-- 2 boinc boinc    508880 Jun  5 18:04 input.tar.gz
[2025-06-05 20:15:40] -rw------- 1 boinc boinc 179756423 Jun  5 20:14 HITS.pool.root.1
[2025-06-05 20:15:40] -rw------- 1 boinc boinc   1024000 Jun  5 20:15 result.tar.gz
20:15:42 (890198): run_atlas exited; CPU time 29948.026043
20:15:42 (890198): called boinc_finish(0)

</stderr_txt>
]]>

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