Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:21:58 (3985157): wrapper (7.7.26015): starting
04:21:58 (3985157): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:21:58] Arguments: --nthreads 12
[2025-06-04 04:21:58] Threads: 12
[2025-06-04 04:21:58] Checking for CVMFS
[2025-06-04 04:21:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:21:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:21:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:21:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:21:58] 2.12.6.0 5613 1093 106080 146773 0 67 32887720 40960001 12454 16776704 0 5864294 99.914 1589037 39752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 04:21:58] CVMFS is ok
[2025-06-04 04:21:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:21:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:21:58] Further information can be found at the LHC@home message board.
[2025-06-04 04:21:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:21:58] Checking for apptainer binary...
[2025-06-04 04:21:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:21:58] Running /usr/bin/apptainer --version
[2025-06-04 04:21:58] apptainer version 1.4.1-1.el9
[2025-06-04 04:21:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:21:58] c6-8-12-2.aglt2.org
[2025-06-04 04:21:58] apptainer works
[2025-06-04 04:21:58] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:21:58] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:21:58] Starting ATLAS job with PandaID=6678212603
[2025-06-04 04:21:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:48:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:48:42]  domain=
[2025-06-04 05:48:42]  filesize=365391
[2025-06-04 05:48:42]  filetype=log
[2025-06-04 05:48:42]  guid=a71c2c9b-d07b-4675-b545-bb8c782ac064
[2025-06-04 05:48:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:48:42]  is_altstaged=None
[2025-06-04 05:48:42]  is_tar=False
[2025-06-04 05:48:42]  lfn=log.45006595._048462.job.log.tgz.1
[2025-06-04 05:48:42]  mtime=0
[2025-06-04 05:48:42]  protocol_id=None
[2025-06-04 05:48:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:48:42]  replicas=None
[2025-06-04 05:48:42]  scope=mc23_13p6TeV
[2025-06-04 05:48:42]  status=None
[2025-06-04 05:48:42]  status_code=0
[2025-06-04 05:48:42]  storage_token=
[2025-06-04 05:48:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678212603/log.45006595._048462.job.log.tgz.1
[2025-06-04 05:48:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/f3/log.45006595._048462.job.log.tgz.1
[2025-06-04 05:48:42]  workdir=None
[2025-06-04 05:48:42] ]
[2025-06-04 05:48:42] 2025-06-04 09:48:21,907 | INFO     | transferring file log.45006595._048462.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678212603/log.45006595._048462.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:48:42] 2025-06-04 09:48:21,907 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678212603/log.45006595._048462.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048462.job
[2025-06-04 05:48:42] 2025-06-04 09:48:21,926 | INFO     | adding to output.list: log.45006595._048462.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/f3/log.45006595._048462.job.log.tg
[2025-06-04 05:48:42] 2025-06-04 09:48:21,927 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:48:42] 2025-06-04 09:48:21,927 | INFO     | summary of transferred files:
[2025-06-04 05:48:42] 2025-06-04 09:48:21,927 | INFO     |  -- lfn=log.45006595._048462.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:48:42] 2025-06-04 09:48:21,927 | INFO     | stage-out finished correctly
[2025-06-04 05:48:42] 2025-06-04 09:48:22,015 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:48:42] 2025-06-04 09:48:23,112 | INFO     | monitor loop #375: job 0:6678212603 is in state 'finished'
[2025-06-04 05:48:42] 2025-06-04 09:48:23,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:48:42] 2025-06-04 09:48:23,660 | INFO     | job 6678212603 has state=finished
[2025-06-04 05:48:42] 2025-06-04 09:48:23,660 | INFO     | preparing for final server update for job 6678212603 in state='finished'
[2025-06-04 05:48:42] 2025-06-04 09:48:23,661 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:48:42] 2025-06-04 09:48:23,661 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:48:42] 2025-06-04 09:48:23,661 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:48:42] 2025-06-04 09:48:23,661 | INFO     | job 6678212603 has finished - writing final server update
[2025-06-04 05:48:42] 2025-06-04 09:48:23,661 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:48:42] 2025-06-04 09:48:23,677 | INFO     | executing command: lscpu
[2025-06-04 05:48:42] 2025-06-04 09:48:23,760 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:48:42] 2025-06-04 09:48:25,616 | INFO     | monitor loop #376: job 0:6678212603 is in state 'finished'
[2025-06-04 05:48:42] 2025-06-04 09:48:25,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:48:42] 2025-06-04 09:48:27,795 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:48:42] 2025-06-04 09:48:27,796 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678212603/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:48:42] 2025-06-04 09:48:27,797 | INFO     | extracted standard info from prmon json
[2025-06-04 05:48:42] 2025-06-04 09:48:27,797 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:48:42] 2025-06-04 09:48:27,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:48:42] 2025-06-04 09:48:27,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:48:42] 2025-06-04 09:48:27,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:48:42] 2025-06-04 09:48:27,800 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:48:42] 2025-06-04 09:48:27,800 | INFO     | sum of square deviations: 147124955.48717925
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | sum of deviations: -2920882327.871792
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | mean x: 1749028008.5128205
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | mean y: 2512310.871794872
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | -- intersect: 34726091217.66762
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | intersect: 34726091217.66762
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | chi2: 1.2451186909058967
[2025-06-04 05:48:42] 2025-06-04 09:48:27,801 | INFO     | -- intersect: 34726091217.66762
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | current memory leak: -19.85 B/s (using 78 data points, chi2=1.25)
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | ..............................
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | . Timing measurements:
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | . get job = 0 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | . initial setup = 2 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | . payload setup = 6 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | . stage-in = 0 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,802 | INFO     | . payload execution = 5145 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,803 | INFO     | . stage-out = 0 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,803 | INFO     | . log creation = 0 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,803 | INFO     | ..............................
[2025-06-04 05:48:42] 2025-06-04 09:48:27,897 | INFO     | 
[2025-06-04 05:48:42] 2025-06-04 09:48:27,897 | INFO     | job summary report
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | --------------------------------------------------
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | PanDA job id: 6678212603
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | task id: 45006595
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | errors: (none)
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | pilot state: finished 
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | transexitcode: 0
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | exeerrorcode: 0
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | exeerrordiag: 
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | exitcode: 0
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | exitmsg: OK
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | cpuconsumptiontime: 34067 s
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | nevents: 400
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | neventsw: 0
[2025-06-04 05:48:42] 2025-06-04 09:48:27,898 | INFO     | pid: 3997910
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | pgrp: 3997910
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | corecount: 12
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | event service: False
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 5156: 2431750, 5158: 2440875, 5164: 2440989}
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | --------------------------------------------------
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | 
[2025-06-04 05:48:42] 2025-06-04 09:48:27,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:48:42] 2025-06-04 09:48:27,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:48:42] 2025-06-04 09:48:27,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:48:42] 2025-06-04 09:48:27,921 | INFO     | job 6678212603 has completed (purged errors)
[2025-06-04 05:48:42] 2025-06-04 09:48:27,921 | INFO     | overall cleanup function is called
[2025-06-04 05:48:42] 2025-06-04 09:48:28,929 | INFO     | --- collectZombieJob: --- 10, [3997910]
[2025-06-04 05:48:42] 2025-06-04 09:48:28,929 | INFO     | zombie collector waiting for pid 3997910
[2025-06-04 05:48:42] 2025-06-04 09:48:28,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:48:42] 2025-06-04 09:48:28,930 | INFO     | collected zombie processes
[2025-06-04 05:48:42] 2025-06-04 09:48:28,930 | INFO     | will attempt to kill all subprocesses of pid=3997910
[2025-06-04 05:48:42] 2025-06-04 09:48:29,151 | INFO     | process IDs to be killed: [3997910] (in reverse order)
[2025-06-04 05:48:42] 2025-06-04 09:48:29,244 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:48:42] 2025-06-04 09:48:29,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:48:42] 2025-06-04 09:48:29,256 | INFO     | did not find any defunct processes belonging to 3997910
[2025-06-04 05:48:42] 2025-06-04 09:48:29,270 | INFO     | did not find any defunct processes belonging to 3997910
[2025-06-04 05:48:42] 2025-06-04 09:48:29,271 | INFO     | ready for new job
[2025-06-04 05:48:42] 2025-06-04 09:48:29,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:48:42] 2025-06-04 09:48:29,274 | INFO     | **************************************
[2025-06-04 05:48:42] 2025-06-04 09:48:29,274 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:48:42] 2025-06-04 09:48:29,274 | INFO     | **************************************
[2025-06-04 05:48:42] 2025-06-04 09:48:29,275 | INFO     | 
[2025-06-04 05:48:42] 2025-06-04 09:48:29,290 | INFO     | architecture information:
[2025-06-04 05:48:42] 2025-06-04 09:48:29,291 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:48:42] 2025-06-04 09:48:29,308 | INFO     | cat /etc/os-release:
[2025-06-04 05:48:42] NAME="CentOS Linux"
[2025-06-04 05:48:42] VERSION="7 (Core)"
[2025-06-04 05:48:42] ID="centos"
[2025-06-04 05:48:42] ID_LIKE="rhel fedora"
[2025-06-04 05:48:42] VERSION_ID="7"
[2025-06-04 05:48:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:48:42] ANSI_COLOR="0;31"
[2025-06-04 05:48:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:48:42] HOME_URL="https://www.centos.org/"
[2025-06-04 05:48:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:48:42] 
[2025-06-04 05:48:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:48:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:48:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:48:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:48:42] 
[2025-06-04 05:48:42] 2025-06-04 09:48:29,309 | INFO     | **************************************
[2025-06-04 05:48:42] 2025-06-04 09:48:29,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:48:42] 2025-06-04 09:48:29,829 | INFO     | sufficient remaining disk space (56311676928 B)
[2025-06-04 05:48:42] 2025-06-04 09:48:29,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:48:42] 2025-06-04 09:48:29,829 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:48:42] 2025-06-04 09:48:29,829 | INFO     | update_server=False
[2025-06-04 05:48:42] 2025-06-04 09:48:29,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:48:42] 2025-06-04 09:48:29,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:48:42] 2025-06-04 09:48:29,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:48:42] 2025-06-04 09:48:29,830 | INFO     | aborting loop
[2025-06-04 05:48:42] 2025-06-04 09:48:29,992 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:48:42] 2025-06-04 09:48:29,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:48:42] 2025-06-04 09:48:29,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:48:42] 2025-06-04 09:48:30,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:48:42] 2025-06-04 09:48:30,566 | INFO     | all job control threads have been joined
[2025-06-04 05:48:42] 2025-06-04 09:48:30,651 | INFO     | all data control threads have been joined
[2025-06-04 05:48:42] 2025-06-04 09:48:30,834 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:30,835 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:30,835 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:30,863 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:30,955 | INFO     | all payload control threads have been joined
[2025-06-04 05:48:42] 2025-06-04 09:48:31,048 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,555 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,572 | INFO     | [job] control thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,657 | INFO     | [data] control thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,856 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,875 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,909 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:31,959 | INFO     | [payload] control thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:32,031 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:32,123 | INFO     | [job] validate thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:32,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:48:42] 2025-06-04 09:48:36,616 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:48:42] 2025-06-04 09:48:36,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467881117504)>', '<ExcThread(monitor, started 140467173848832)>']
[2025-06-04 05:48:42] 2025-06-04 09:48:37,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:48:42] 2025-06-04 09:48:37,028 | INFO     | [monitor] control thread has ended
[2025-06-04 05:48:42] 2025-06-04 09:48:41,890 | INFO     | all workflow threads have been joined
[2025-06-04 05:48:42] 2025-06-04 09:48:41,891 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:48:42] 2025-06-04 09:48:41,891 | INFO     | traces error code: 0
[2025-06-04 05:48:42] 2025-06-04 09:48:41,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:48:42] 2025-06-04 09:48:42,054 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:48:42] 2025-06-04 09:48:42,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:48:42] 2025-06-04 09:48:42,062 [wrapper] pilotpid: 3988739
[2025-06-04 05:48:42] 2025-06-04 09:48:42,065 [wrapper] Pilot exit status: 0
[2025-06-04 05:48:42] 2025-06-04 09:48:42,078 [wrapper] pandaids: 6678212603
[2025-06-04 05:48:42] 2025-06-04 09:48:42,137 [wrapper] cleanup supervisor_pilot 4179729 3988740
[2025-06-04 05:48:42] 2025-06-04 09:48:42,141 [wrapper] Test setup, not cleaning
[2025-06-04 05:48:42] 2025-06-04 09:48:42,144 [wrapper] apfmon messages muted
[2025-06-04 05:48:42] 2025-06-04 09:48:42,147 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:48:42] 2025-06-04 09:48:42,149 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:48:42]  *** Error codes and diagnostics ***
[2025-06-04 05:48:42]     "exeErrorCode": 0,
[2025-06-04 05:48:42]     "exeErrorDiag": "",
[2025-06-04 05:48:42]     "pilotErrorCode": 0,
[2025-06-04 05:48:42]     "pilotErrorDiag": "",
[2025-06-04 05:48:42]  *** Listing of results directory ***
[2025-06-04 05:48:42] total 386568
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:42 pilot3.tar.gz
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:48 queuedata.json
[2025-06-04 05:48:42] -rwx------. 1 boincer umatlas     37140 Jun  3 19:50 runpilot2-wrapper.sh
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas       100 Jun  4 04:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:48:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 04:21 run_atlas
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas       105 Jun  4 04:21 job.xml
[2025-06-04 05:48:42] -rw-r--r--. 2 boincer umatlas 213450175 Jun  4 04:21 EVNT.45006593._001944.pool.root.1
[2025-06-04 05:48:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:21 start_atlas.sh
[2025-06-04 05:48:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 04:21 shared
[2025-06-04 05:48:42] -rw-r--r--. 2 boincer umatlas    508889 Jun  4 04:21 input.tar.gz
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas         0 Jun  4 04:21 boinc_lockfile
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 04:21 pandaJob.out
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas    986774 Jun  4 04:22 agis_schedconf.cvmfs.json
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas   1603667 Jun  4 04:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:48:42] drwx------. 4 boincer umatlas      4096 Jun  4 04:22 pilot3
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas        95 Jun  4 05:47 pilot_heartbeat.json
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas 176837786 Jun  4 05:47 HITS.45006595._048462.pool.root.1
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 05:47 init_data.xml
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:47 boinc_task_state.xml
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas      1030 Jun  4 05:48 memory_monitor_summary.json
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:48 boinc_mmap_file
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:48 wrapper_checkpoint.txt
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas    365391 Jun  4 05:48 log.45006595._048462.job.log.tgz.1
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas      7712 Jun  4 05:48 heartbeat.json
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas      4353 Jun  4 05:48 pilotlog.txt
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas    499223 Jun  4 05:48 log.45006595._048462.job.log.1
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas       357 Jun  4 05:48 output.list
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:48 runtime_log
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas    880640 Jun  4 05:48 result.tar.gz
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 05:48 runtime_log.err
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas       653 Jun  4 05:48 gwkNDmTZqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMYmKDmOxOOSn.diag
[2025-06-04 05:48:42] -rw-r--r--. 1 boincer umatlas     21049 Jun  4 05:48 stderr.txt
[2025-06-04 05:48:42] HITS file was successfully produced:
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas 176837786 Jun  4 05:47 shared/HITS.pool.root.1
[2025-06-04 05:48:42]  *** Contents of shared directory: ***
[2025-06-04 05:48:42] total 382524
[2025-06-04 05:48:42] -rw-r--r--. 2 boincer umatlas 213450175 Jun  4 04:21 ATLAS.root_0
[2025-06-04 05:48:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:21 start_atlas.sh
[2025-06-04 05:48:42] -rw-r--r--. 2 boincer umatlas    508889 Jun  4 04:21 input.tar.gz
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas 176837786 Jun  4 05:47 HITS.pool.root.1
[2025-06-04 05:48:42] -rw-------. 1 boincer umatlas    880640 Jun  4 05:48 result.tar.gz
05:48:43 (3985157): run_atlas exited; CPU time 34115.253032
05:48:43 (3985157): called boinc_finish(0)

</stderr_txt>
]]>

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