Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:16:32 (1775134): wrapper (7.7.26015): starting
11:16:32 (1775134): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:16:32] Arguments: --nthreads 12
[2025-06-04 11:16:32] Threads: 12
[2025-06-04 11:16:32] Checking for CVMFS
[2025-06-04 11:16:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:16:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:16:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:16:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:16:34] 2.12.7.0 33619 1780 50280 146779 3 1 3674655 4096000 2733 130560 1 4764958 99.997 469860 169 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 11:16:34] CVMFS is ok
[2025-06-04 11:16:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:16:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 11:16:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 11:16:34] Further information can be found at the LHC@home message board.
[2025-06-04 11:16:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:16:34] Checking for apptainer binary...
[2025-06-04 11:16:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:16:34] Running /usr/bin/apptainer --version
[2025-06-04 11:16:34] apptainer version 1.3.4
[2025-06-04 11:16:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:16:35] dualxeon1
[2025-06-04 11:16:35] apptainer works
[2025-06-04 11:16:35] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:16:35] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:16:35] Starting ATLAS job with PandaID=6678247943
[2025-06-04 11:16:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:06:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:06:12] 2025-06-04 13:05:51,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:06:12] 2025-06-04 13:05:51,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:06:12] 2025-06-04 13:05:51,480 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:06:12] 2025-06-04 13:05:51,480 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,481 | INFO     | sum of deviations: 13358991551.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,481 | INFO     | mean x: 1749039066.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,481 | INFO     | mean y: 2663203.613207547
[2025-06-04 13:06:12] 2025-06-04 13:05:51,481 | INFO     | -- intersect: -63269956946.74532
[2025-06-04 13:06:12] 2025-06-04 13:05:51,482 | INFO     | intersect: -63269956946.74532
[2025-06-04 13:06:12] 2025-06-04 13:05:51,482 | INFO     | chi2: 1.691985395656356
[2025-06-04 13:06:12] 2025-06-04 13:05:51,482 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,483 | INFO     | sum of deviations: 13332331349.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,483 | INFO     | mean x: 1749038914.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,483 | INFO     | mean y: 2663121.7524752477
[2025-06-04 13:06:12] 2025-06-04 13:05:51,483 | INFO     | -- intersect: -72994435915.6745
[2025-06-04 13:06:12] 2025-06-04 13:05:51,483 | INFO     | intersect: -72994435915.6745
[2025-06-04 13:06:12] 2025-06-04 13:05:51,483 | INFO     | chi2: 1.6934756770718384
[2025-06-04 13:06:12] 2025-06-04 13:05:51,484 | INFO     | current chi2=1.6934756770718384 (change=-0.0880788580863816 %)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,484 | INFO     | right removable region: 100
[2025-06-04 13:06:12] 2025-06-04 13:05:51,484 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | sum of deviations: -6139984035.999999
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | mean x: 1749039219.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | mean y: 2721838.3168316833
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | -- intersect: 33620330731.27982
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | intersect: 33620330731.27982
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | chi2: 0.04426441582824521
[2025-06-04 13:06:12] 2025-06-04 13:05:51,485 | INFO     | current chi2=0.04426441582824521 (change=97.38387719291902 %)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,486 | INFO     | sum of square deviations: 274312120.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,486 | INFO     | sum of deviations: -7377326610.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,486 | INFO     | mean x: 1749039371.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,486 | INFO     | mean y: 2725837.3645833335
[2025-06-04 13:06:12] 2025-06-04 13:05:51,487 | INFO     | -- intersect: 47041240570.79724
[2025-06-04 13:06:12] 2025-06-04 13:05:51,487 | INFO     | intersect: 47041240570.79724
[2025-06-04 13:06:12] 2025-06-04 13:05:51,487 | INFO     | chi2: 0.012533665559720969
[2025-06-04 13:06:12] 2025-06-04 13:05:51,487 | INFO     | current chi2=0.012533665559720969 (change=71.68455671401132 %)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,487 | INFO     | sum of square deviations: 233641590.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,488 | INFO     | sum of deviations: -6912163271.999999
[2025-06-04 13:06:12] 2025-06-04 13:05:51,488 | INFO     | mean x: 1749039524.0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,488 | INFO     | mean y: 2724081.7802197803
[2025-06-04 13:06:12] 2025-06-04 13:05:51,488 | INFO     | -- intersect: 51747136363.297226
[2025-06-04 13:06:12] 2025-06-04 13:05:51,488 | INFO     | intersect: 51747136363.297226
[2025-06-04 13:06:12] 2025-06-04 13:05:51,489 | INFO     | chi2: 0.011012060406339673
[2025-06-04 13:06:12] 2025-06-04 13:05:51,489 | INFO     | current chi2=0.011012060406339673 (change=12.140144845345393 %)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,489 | INFO     | left removable region: 30
[2025-06-04 13:06:12] 2025-06-04 13:05:51,489 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,489 | INFO     | sum of deviations: -4042027445.0000005
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | mean x: 1749039798.5
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | mean y: 2717837.657142857
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | -- intersect: 66486397198.41579
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | intersect: 66486397198.41579
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | chi2: 0.009072866543252619
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | -- intersect: 66486397198.41579
[2025-06-04 13:06:12] 2025-06-04 13:05:51,490 | INFO     | current memory leak: -38.01 B/s (using 70 data points, chi2=0.01)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | ..............................
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | . Timing measurements:
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | . get job = 0 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | . initial setup = 3 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | . payload setup = 16 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | . stage-in = 0 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,491 | INFO     | . payload execution = 6473 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,492 | INFO     | . stage-out = 0 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,492 | INFO     | . log creation = 0 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,492 | INFO     | ..............................
[2025-06-04 13:06:12] 2025-06-04 13:05:51,837 | INFO     | 
[2025-06-04 13:06:12] 2025-06-04 13:05:51,837 | INFO     | job summary report
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | --------------------------------------------------
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | PanDA job id: 6678247943
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | task id: 45006595
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | errors: (none)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | pilot state: finished 
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | transexitcode: 0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | exeerrorcode: 0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,838 | INFO     | exeerrordiag: 
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | exitcode: 0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | exitmsg: OK
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | cpuconsumptiontime: 47365 s
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | nevents: 400
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | neventsw: 0
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | pid: 1785591
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | pgrp: 1785591
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | corecount: 12
[2025-06-04 13:06:12] 2025-06-04 13:05:51,839 | INFO     | event service: False
[2025-06-04 13:06:12] 2025-06-04 13:05:51,840 | INFO     | sizes: {0: 2405036, 1: 2405235, 11: 2405441, 12: 2405469, 6493: 2432276, 6495: 2441263, 6497: 2441447, 6513: 2441617}
[2025-06-04 13:06:12] 2025-06-04 13:05:51,840 | INFO     | --------------------------------------------------
[2025-06-04 13:06:12] 2025-06-04 13:05:51,840 | INFO     | 
[2025-06-04 13:06:12] 2025-06-04 13:05:51,840 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-04 13:06:12] 2025-06-04 13:05:51,858 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | job 6678247943 has completed (purged errors)
[2025-06-04 13:06:12] 2025-06-04 13:05:51,860 | INFO     | overall cleanup function is called
[2025-06-04 13:06:12] 2025-06-04 13:05:52,869 | INFO     | --- collectZombieJob: --- 10, [1785591]
[2025-06-04 13:06:12] 2025-06-04 13:05:52,869 | INFO     | zombie collector waiting for pid 1785591
[2025-06-04 13:06:12] 2025-06-04 13:05:52,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:06:12] 2025-06-04 13:05:52,870 | INFO     | collected zombie processes
[2025-06-04 13:06:12] 2025-06-04 13:05:52,870 | INFO     | will attempt to kill all subprocesses of pid=1785591
[2025-06-04 13:06:12] 2025-06-04 13:05:53,055 | INFO     | process IDs to be killed: [1785591] (in reverse order)
[2025-06-04 13:06:12] 2025-06-04 13:05:53,108 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:06:12] 2025-06-04 13:05:53,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:06:12] 2025-06-04 13:05:53,113 | INFO     | did not find any defunct processes belonging to 1785591
[2025-06-04 13:06:12] 2025-06-04 13:05:53,117 | INFO     | did not find any defunct processes belonging to 1785591
[2025-06-04 13:06:12] 2025-06-04 13:05:53,118 | INFO     | ready for new job
[2025-06-04 13:06:12] 2025-06-04 13:05:53,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:06:12] 2025-06-04 13:05:53,119 | INFO     | **************************************
[2025-06-04 13:06:12] 2025-06-04 13:05:53,120 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:06:12] 2025-06-04 13:05:53,120 | INFO     | **************************************
[2025-06-04 13:06:12] 2025-06-04 13:05:53,120 | INFO     | 
[2025-06-04 13:06:12] 2025-06-04 13:05:53,122 | INFO     | architecture information:
[2025-06-04 13:06:12] 2025-06-04 13:05:53,122 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:06:12] 2025-06-04 13:05:53,135 | INFO     | cat /etc/os-release:
[2025-06-04 13:06:12] NAME="CentOS Linux"
[2025-06-04 13:06:12] VERSION="7 (Core)"
[2025-06-04 13:06:12] ID="centos"
[2025-06-04 13:06:12] ID_LIKE="rhel fedora"
[2025-06-04 13:06:12] VERSION_ID="7"
[2025-06-04 13:06:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:06:12] ANSI_COLOR="0;31"
[2025-06-04 13:06:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:06:12] HOME_URL="https://www.centos.org/"
[2025-06-04 13:06:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:06:12] 
[2025-06-04 13:06:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:06:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:06:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:06:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:06:12] 
[2025-06-04 13:06:12] 2025-06-04 13:05:53,136 | INFO     | **************************************
[2025-06-04 13:06:12] 2025-06-04 13:05:53,639 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-04 13:06:12] 2025-06-04 13:05:53,656 | INFO     | sufficient remaining disk space (9835642880 B)
[2025-06-04 13:06:12] 2025-06-04 13:05:53,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:06:12] 2025-06-04 13:05:53,656 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:06:12] 2025-06-04 13:05:53,656 | INFO     | update_server=False
[2025-06-04 13:06:12] 2025-06-04 13:05:53,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:06:12] 2025-06-04 13:05:53,712 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:06:12] 2025-06-04 13:05:53,712 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:06:12] 2025-06-04 13:05:53,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:06:12] 2025-06-04 13:05:53,713 | INFO     | will abort loop
[2025-06-04 13:06:12] 2025-06-04 13:05:53,799 | INFO     | all payload control threads have been joined
[2025-06-04 13:06:12] 2025-06-04 13:05:54,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:06:12] 2025-06-04 13:05:54,267 | INFO     | all job control threads have been joined
[2025-06-04 13:06:12] 2025-06-04 13:05:54,330 | INFO     | all data control threads have been joined
[2025-06-04 13:06:12] 2025-06-04 13:05:54,359 | INFO     | PID=1778885 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:06:12] 2025-06-04 13:05:54,360 | INFO     | .. there are 4 such processes running
[2025-06-04 13:06:12] 2025-06-04 13:05:54,360 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:06:12] 2025-06-04 13:05:54,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:06:12] 2025-06-04 13:05:54,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:06:12] 2025-06-04 13:05:54,661 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:54,717 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:54,805 | INFO     | [payload] control thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,166 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,186 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,272 | INFO     | [job] control thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,338 | INFO     | [data] control thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,343 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,498 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:06:12] 2025-06-04 13:05:55,734 | INFO     | [job] validate thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:55,746 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:56,090 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:56,102 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:56,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:06:12] 2025-06-04 13:05:57,618 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:05:59,712 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:06:03,941 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:06:12] 2025-06-04 13:06:04,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:06:12] 2025-06-04 13:06:06,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127793913706304)>', '<ExcThread(monitor, started 127793555810048)>']
[2025-06-04 13:06:12] 2025-06-04 13:06:07,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:06:12] 2025-06-04 13:06:07,428 | INFO     | [monitor] control thread has ended
[2025-06-04 13:06:12] 2025-06-04 13:06:11,551 | INFO     | all workflow threads have been joined
[2025-06-04 13:06:12] 2025-06-04 13:06:11,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:06:12] 2025-06-04 13:06:11,552 | INFO     | traces error code: 0
[2025-06-04 13:06:12] 2025-06-04 13:06:11,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:06:12] 2025-06-04 13:06:11,779 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:06:12] 2025-06-04 13:06:11,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:06:12] 2025-06-04 13:06:11,794 [wrapper] pilotpid: 1778885
[2025-06-04 13:06:12] 2025-06-04 13:06:11,799 [wrapper] Pilot exit status: 0
[2025-06-04 13:06:12] 2025-06-04 13:06:11,826 [wrapper] pandaids: 6678247943
[2025-06-04 13:06:12] 2025-06-04 13:06:11,899 [wrapper] cleanup supervisor_pilot 1899827 1778886
[2025-06-04 13:06:12] 2025-06-04 13:06:11,908 [wrapper] Test setup, not cleaning
[2025-06-04 13:06:12] 2025-06-04 13:06:11,914 [wrapper] apfmon messages muted
[2025-06-04 13:06:12] 2025-06-04 13:06:11,919 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:06:12] 2025-06-04 13:06:11,925 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:06:12]  *** Error codes and diagnostics ***
[2025-06-04 13:06:12]     "exeErrorCode": 0,
[2025-06-04 13:06:12]     "exeErrorDiag": "",
[2025-06-04 13:06:12]     "pilotErrorCode": 0,
[2025-06-04 13:06:12]     "pilotErrorDiag": "",
[2025-06-04 13:06:12]  *** Listing of results directory ***
[2025-06-04 13:06:12] total 391624
[2025-06-04 13:06:12] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 13:06:12] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:17 queuedata.json
[2025-06-04 13:06:12] -rwx------ 1 boinc boinc     37140 Jun  4 02:18 runpilot2-wrapper.sh
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc       100 Jun  4 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:06:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:16 run_atlas
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc       105 Jun  4 11:16 job.xml
[2025-06-04 13:06:12] -rw-r--r-- 2 boinc boinc 216206243 Jun  4 11:16 EVNT.45006593._002029.pool.root.1
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc      9390 Jun  4 11:16 init_data.xml
[2025-06-04 13:06:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:16 start_atlas.sh
[2025-06-04 13:06:12] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:16 shared
[2025-06-04 13:06:12] -rw-r--r-- 2 boinc boinc    508882 Jun  4 11:16 input.tar.gz
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc         0 Jun  4 11:16 boinc_lockfile
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc      2525 Jun  4 11:16 pandaJob.out
[2025-06-04 13:06:12] -rw------- 1 boinc boinc    986812 Jun  4 11:16 agis_schedconf.cvmfs.json
[2025-06-04 13:06:12] -rw------- 1 boinc boinc   1603667 Jun  4 11:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:06:12] drwx------ 4 boinc boinc      4096 Jun  4 11:16 pilot3
[2025-06-04 13:06:12] -rw------- 1 boinc boinc 178904882 Jun  4 13:04 HITS.45006595._050620.pool.root.1
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc       530 Jun  4 13:04 boinc_task_state.xml
[2025-06-04 13:06:12] -rw------- 1 boinc boinc        95 Jun  4 13:05 pilot_heartbeat.json
[2025-06-04 13:06:12] -rw------- 1 boinc boinc      1024 Jun  4 13:05 memory_monitor_summary.json
[2025-06-04 13:06:12] -rw------- 1 boinc boinc    396181 Jun  4 13:05 log.45006595._050620.job.log.tgz.1
[2025-06-04 13:06:12] -rw------- 1 boinc boinc      7673 Jun  4 13:05 heartbeat.json
[2025-06-04 13:06:12] -rw------- 1 boinc boinc      5027 Jun  4 13:06 pilotlog.txt
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 13:06 boinc_mmap_file
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc        27 Jun  4 13:06 wrapper_checkpoint.txt
[2025-06-04 13:06:12] -rw------- 1 boinc boinc    640188 Jun  4 13:06 log.45006595._050620.job.log.1
[2025-06-04 13:06:12] -rw------- 1 boinc boinc       357 Jun  4 13:06 output.list
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc       620 Jun  4 13:06 runtime_log
[2025-06-04 13:06:12] -rw------- 1 boinc boinc   1054720 Jun  4 13:06 result.tar.gz
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc      8968 Jun  4 13:06 runtime_log.err
[2025-06-04 13:06:12] -rw------- 1 boinc boinc       653 Jun  4 13:06 aKzMDmUtsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmurmKDmvq7sDm.diag
[2025-06-04 13:06:12] -rw-rw-r-- 1 boinc boinc     20771 Jun  4 13:06 stderr.txt
[2025-06-04 13:06:12] HITS file was successfully produced:
[2025-06-04 13:06:12] -rw------- 1 boinc boinc 178904882 Jun  4 13:04 shared/HITS.pool.root.1
[2025-06-04 13:06:12]  *** Contents of shared directory: ***
[2025-06-04 13:06:12] total 387408
[2025-06-04 13:06:12] -rw-r--r-- 2 boinc boinc 216206243 Jun  4 11:16 ATLAS.root_0
[2025-06-04 13:06:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:16 start_atlas.sh
[2025-06-04 13:06:12] -rw-r--r-- 2 boinc boinc    508882 Jun  4 11:16 input.tar.gz
[2025-06-04 13:06:12] -rw------- 1 boinc boinc 178904882 Jun  4 13:04 HITS.pool.root.1
[2025-06-04 13:06:12] -rw------- 1 boinc boinc   1054720 Jun  4 13:06 result.tar.gz
13:06:13 (1775134): run_atlas exited; CPU time 47446.914392
13:06:13 (1775134): called boinc_finish(0)

</stderr_txt>
]]>

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