Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:55:01 (7547): wrapper (7.7.26015): starting
16:55:01 (7547): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:55:01] Arguments: --nthreads 8
[2025-06-04 16:55:01] Threads: 8
[2025-06-04 16:55:01] Checking for CVMFS
[2025-06-04 16:55:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:55:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:55:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:55:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:55:02] 2.11.2.0 3559 33481 88180 146783 0 220 17959756 25165825 3719 130560 0 17883072 99.749 21742885 2651 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 16:55:02] CVMFS is ok
[2025-06-04 16:55:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:55:02] Checking for apptainer binary...
[2025-06-04 16:55:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:55:02] Running /usr/bin/apptainer --version
[2025-06-04 16:55:03] apptainer version 1.3.2-1.el7
[2025-06-04 16:55:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:55:04] cg-vwn492.simple-grid.lan
[2025-06-04 16:55:04] apptainer works
[2025-06-04 16:55:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:55:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:55:04] Starting ATLAS job with PandaID=6666851708
[2025-06-04 16:55:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:54:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:54:18] 2025-06-04 19:43:41,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:54:18] 2025-06-04 19:43:41,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:54:18] 2025-06-04 19:43:41,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:54:18] 2025-06-04 19:43:41,432 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:54:18] 2025-06-04 19:43:41,432 | INFO     | sum of square deviations: 6448679050.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,446 | INFO     | sum of deviations: 80336338028.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,446 | INFO     | mean x: 1749057761.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,447 | INFO     | mean y: 2449191.050909091
[2025-06-04 21:54:18] 2025-06-04 19:43:41,447 | INFO     | -- intersect: -21786958287.398933
[2025-06-04 21:54:18] 2025-06-04 19:43:41,447 | INFO     | intersect: -21786958287.398933
[2025-06-04 21:54:18] 2025-06-04 19:43:41,447 | INFO     | chi2: 5.134085089867022
[2025-06-04 21:54:18] 2025-06-04 19:43:41,448 | INFO     | sum of square deviations: 6103286527.5
[2025-06-04 21:54:18] 2025-06-04 19:43:41,450 | INFO     | sum of deviations: 96687298541.00002
[2025-06-04 21:54:18] 2025-06-04 19:43:41,450 | INFO     | mean x: 1749057608.5
[2025-06-04 21:54:18] 2025-06-04 19:43:41,450 | INFO     | mean y: 2456291.8666666667
[2025-06-04 21:54:18] 2025-06-04 19:43:41,451 | INFO     | -- intersect: -27705837329.360023
[2025-06-04 21:54:18] 2025-06-04 19:43:41,451 | INFO     | intersect: -27705837329.360023
[2025-06-04 21:54:18] 2025-06-04 19:43:41,451 | INFO     | chi2: 4.393711905837147
[2025-06-04 21:54:18] 2025-06-04 19:43:41,451 | INFO     | current chi2=4.393711905837147 (change=14.420742373185934 %)
[2025-06-04 21:54:18] 2025-06-04 19:43:41,451 | INFO     | right removable region: 269
[2025-06-04 21:54:18] 2025-06-04 19:43:41,452 | INFO     | sum of square deviations: 6103286527.5
[2025-06-04 21:54:18] 2025-06-04 19:43:41,454 | INFO     | sum of deviations: -6256553785.500002
[2025-06-04 21:54:18] 2025-06-04 19:43:41,455 | INFO     | mean x: 1749057913.5
[2025-06-04 21:54:18] 2025-06-04 19:43:41,455 | INFO     | mean y: 2487363.033333333
[2025-06-04 21:54:18] 2025-06-04 19:43:41,455 | INFO     | -- intersect: 1795468056.3794825
[2025-06-04 21:54:18] 2025-06-04 19:43:41,455 | INFO     | intersect: 1795468056.3794825
[2025-06-04 21:54:18] 2025-06-04 19:43:41,455 | INFO     | chi2: 1.271382086671046
[2025-06-04 21:54:18] 2025-06-04 19:43:41,456 | INFO     | current chi2=1.271382086671046 (change=75.23644301921813 %)
[2025-06-04 21:54:18] 2025-06-04 19:43:41,456 | INFO     | sum of square deviations: 5770452380.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,458 | INFO     | sum of deviations: -27431355838.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,459 | INFO     | mean x: 1749058066.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,459 | INFO     | mean y: 2496981.132075472
[2025-06-04 21:54:18] 2025-06-04 19:43:41,459 | INFO     | -- intersect: 8317102324.044565
[2025-06-04 21:54:18] 2025-06-04 19:43:41,459 | INFO     | intersect: 8317102324.044565
[2025-06-04 21:54:18] 2025-06-04 19:43:41,459 | INFO     | chi2: 0.8643122398877038
[2025-06-04 21:54:18] 2025-06-04 19:43:41,460 | INFO     | current chi2=0.8643122398877038 (change=32.017900130180635 %)
[2025-06-04 21:54:18] 2025-06-04 19:43:41,460 | INFO     | sum of square deviations: 5449944045.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,462 | INFO     | sum of deviations: -19326823217.5
[2025-06-04 21:54:18] 2025-06-04 19:43:41,463 | INFO     | mean x: 1749058218.5
[2025-06-04 21:54:18] 2025-06-04 19:43:41,463 | INFO     | mean y: 2493118.9961538464
[2025-06-04 21:54:18] 2025-06-04 19:43:41,463 | INFO     | -- intersect: 6205077715.635804
[2025-06-04 21:54:18] 2025-06-04 19:43:41,463 | INFO     | intersect: 6205077715.635804
[2025-06-04 21:54:18] 2025-06-04 19:43:41,464 | INFO     | chi2: 0.8377068421892578
[2025-06-04 21:54:18] 2025-06-04 19:43:41,464 | INFO     | current chi2=0.8377068421892578 (change=3.078216004658532 %)
[2025-06-04 21:54:18] 2025-06-04 19:43:41,464 | INFO     | left removable region: 30
[2025-06-04 21:54:18] 2025-06-04 19:43:41,464 | INFO     | sum of square deviations: 4233158440.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,466 | INFO     | sum of deviations: 4667338384.000001
[2025-06-04 21:54:18] 2025-06-04 19:43:41,466 | INFO     | mean x: 1749058493.0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,467 | INFO     | mean y: 2497998.2970711295
[2025-06-04 21:54:18] 2025-06-04 19:43:41,467 | INFO     | -- intersect: -1925955178.201585
[2025-06-04 21:54:18] 2025-06-04 19:43:41,467 | INFO     | intersect: -1925955178.201585
[2025-06-04 21:54:18] 2025-06-04 19:43:41,467 | INFO     | chi2: 0.0007003436096041425
[2025-06-04 21:54:18] 2025-06-04 19:43:41,467 | INFO     | -- intersect: -1925955178.201585
[2025-06-04 21:54:18] 2025-06-04 19:43:41,467 | INFO     | current memory leak: 1.10 B/s (using 239 data points, chi2=0.00)
[2025-06-04 21:54:18] 2025-06-04 19:43:41,468 | INFO     | ..............................
[2025-06-04 21:54:18] 2025-06-04 19:43:41,468 | INFO     | . Timing measurements:
[2025-06-04 21:54:18] 2025-06-04 19:43:41,468 | INFO     | . get job = 0 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | . initial setup = 5 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | . payload setup = 167 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | . stage-in = 0 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | . payload execution = 16863 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | . stage-out = 2 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | . log creation = 1 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,469 | INFO     | ..............................
[2025-06-04 21:54:18] 2025-06-04 19:43:41,590 | INFO     | 
[2025-06-04 21:54:18] 2025-06-04 19:43:41,590 | INFO     | job summary report
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | --------------------------------------------------
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | PanDA job id: 6666851708
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | task id: 44871837
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | errors: (none)
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | pilot state: finished 
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | transexitcode: 0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | exeerrorcode: 0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | exeerrordiag: 
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | exitcode: 0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | exitmsg: OK
[2025-06-04 21:54:18] 2025-06-04 19:43:41,591 | INFO     | cpuconsumptiontime: 63404 s
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | nevents: 400
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | neventsw: 0
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | pid: 21433
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | pgrp: 21433
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | corecount: 8
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | event service: False
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | sizes: {0: 2397222, 1: 2397421, 12: 2397421, 23: 2397449, 33: 2397477, 44: 2397533, 55: 2397689, 66: 2397717, 67: 2397951, 76: 2397979, 17035: 2428852, 17036: 2429
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | --------------------------------------------------
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | 
[2025-06-04 21:54:18] 2025-06-04 19:43:41,592 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-04 21:54:18] 2025-06-04 19:43:42,229 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:54:18] 2025-06-04 19:43:42,231 | INFO     | job 6666851708 has completed (purged errors)
[2025-06-04 21:54:18] 2025-06-04 19:43:42,232 | INFO     | overall cleanup function is called
[2025-06-04 21:54:18] 2025-06-04 19:43:43,240 | INFO     | --- collectZombieJob: --- 10, [21433]
[2025-06-04 21:54:18] 2025-06-04 19:43:43,240 | INFO     | zombie collector waiting for pid 21433
[2025-06-04 21:54:18] 2025-06-04 19:43:43,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:54:18] 2025-06-04 19:43:43,241 | INFO     | collected zombie processes
[2025-06-04 21:54:18] 2025-06-04 19:43:43,241 | INFO     | will attempt to kill all subprocesses of pid=21433
[2025-06-04 21:54:18] 2025-06-04 19:43:43,396 | INFO     | process IDs to be killed: [21433] (in reverse order)
[2025-06-04 21:54:18] 2025-06-04 19:43:44,016 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:54:18] 2025-06-04 19:43:44,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:54:18] 2025-06-04 19:43:44,020 | INFO     | did not find any defunct processes belonging to 21433
[2025-06-04 21:54:18] 2025-06-04 19:43:44,023 | INFO     | did not find any defunct processes belonging to 21433
[2025-06-04 21:54:18] 2025-06-04 19:43:44,023 | INFO     | ready for new job
[2025-06-04 21:54:18] 2025-06-04 19:43:44,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:54:18] 2025-06-04 19:43:44,026 | INFO     | **************************************
[2025-06-04 21:54:18] 2025-06-04 19:43:44,026 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:54:18] 2025-06-04 19:43:44,026 | INFO     | **************************************
[2025-06-04 21:54:18] 2025-06-04 19:43:44,026 | INFO     | 
[2025-06-04 21:54:18] 2025-06-04 19:43:44,027 | INFO     | pilot is running in a VM
[2025-06-04 21:54:18] 2025-06-04 19:43:44,027 | INFO     | architecture information:
[2025-06-04 21:54:18] 2025-06-04 19:43:44,027 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:54:18] 2025-06-04 19:43:44,102 | INFO     | cat /etc/os-release:
[2025-06-04 21:54:18] NAME="CentOS Linux"
[2025-06-04 21:54:18] VERSION="7 (Core)"
[2025-06-04 21:54:18] ID="centos"
[2025-06-04 21:54:18] ID_LIKE="rhel fedora"
[2025-06-04 21:54:18] VERSION_ID="7"
[2025-06-04 21:54:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:54:18] ANSI_COLOR="0;31"
[2025-06-04 21:54:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:54:18] HOME_URL="https://www.centos.org/"
[2025-06-04 21:54:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:54:18] 
[2025-06-04 21:54:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:54:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:54:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:54:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:54:18] 
[2025-06-04 21:54:18] 2025-06-04 19:43:44,102 | INFO     | **************************************
[2025-06-04 21:54:18] 2025-06-04 19:43:44,604 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-04 21:54:18] 2025-06-04 19:43:44,693 | INFO     | sufficient remaining disk space (496797483008 B)
[2025-06-04 21:54:18] 2025-06-04 19:43:44,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:54:18] 2025-06-04 19:43:44,693 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:54:18] 2025-06-04 19:43:44,694 | INFO     | update_server=False
[2025-06-04 21:54:18] 2025-06-04 19:43:44,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:54:18] 2025-06-04 19:43:44,724 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:54:18] 2025-06-04 19:43:44,724 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:54:18] 2025-06-04 19:43:44,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:54:18] 2025-06-04 19:43:44,725 | INFO     | will abort loop
[2025-06-04 21:54:18] 2025-06-04 19:43:44,778 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:54:18] 2025-06-04 19:43:44,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:54:18] 2025-06-04 19:43:44,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:54:18] 2025-06-04 19:43:44,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:54:18] 2025-06-04 19:43:45,344 | INFO     | all data control threads have been joined
[2025-06-04 21:54:18] 2025-06-04 19:43:45,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:54:18] 2025-06-04 19:43:45,699 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:45,730 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:45,927 | INFO     | all job control threads have been joined
[2025-06-04 21:54:18] 2025-06-04 19:43:45,983 | INFO     | all payload control threads have been joined
[2025-06-04 21:54:18] 2025-06-04 19:43:46,156 | INFO     | [job] validate thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,225 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,234 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,295 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,350 | INFO     | [data] control thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:54:18] 2025-06-04 19:43:46,647 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,726 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,932 | INFO     | [job] control thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:46,989 | INFO     | [payload] control thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:47,121 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:47,386 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:47,610 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:48,810 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:55,149 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:54:18] 2025-06-04 19:43:56,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:54:18] 2025-06-04 19:43:57,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574870312768)>', '<ExcThread(monitor, started 140574564783872)>']
[2025-06-04 21:54:18] 2025-06-04 19:43:57,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:54:18] 2025-06-04 19:43:57,856 | INFO     | [monitor] control thread has ended
[2025-06-04 21:54:18] 2025-06-04 19:44:02,718 | INFO     | all workflow threads have been joined
[2025-06-04 21:54:18] 2025-06-04 19:44:02,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:54:18] 2025-06-04 19:44:02,719 | INFO     | traces error code: 0
[2025-06-04 21:54:18] 2025-06-04 19:44:02,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:54:18] 2025-06-04 19:44:03,104 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:54:18] 2025-06-04 19:44:03,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:54:18] 2025-06-04 19:44:03,289 [wrapper] pilotpid: 14661
[2025-06-04 21:54:18] 2025-06-04 19:44:03,317 [wrapper] Pilot exit status: 0
[2025-06-04 21:54:18] 2025-06-04 19:44:03,859 [wrapper] pandaids: 6666851708
[2025-06-04 21:54:18] 2025-06-04 19:44:04,695 [wrapper] cleanup supervisor_pilot 23292 14662
[2025-06-04 21:54:18] 2025-06-04 19:44:04,787 [wrapper] Test setup, not cleaning
[2025-06-04 21:54:18] 2025-06-04 19:44:04,896 [wrapper] apfmon messages muted
[2025-06-04 21:54:18] 2025-06-04 19:44:04,987 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:54:18] 2025-06-04 19:44:05,042 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:54:18]  *** Error codes and diagnostics ***
[2025-06-04 21:54:18]     "exeErrorCode": 0,
[2025-06-04 21:54:18]     "exeErrorDiag": "",
[2025-06-04 21:54:18]     "pilotErrorCode": 0,
[2025-06-04 21:54:18]     "pilotErrorDiag": "",
[2025-06-04 21:54:18]  *** Listing of results directory ***
[2025-06-04 21:54:18] total 417188
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc    495897 May 27 11:27 pilot3.tar.gz
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc      5111 May 27 12:03 queuedata.json
[2025-06-04 21:54:18] -rwx------. 1 boinc boinc     37140 May 27 12:07 runpilot2-wrapper.sh
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc       100 Jun  4 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:54:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 16:55 run_atlas
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc       105 Jun  4 16:55 job.xml
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc      6393 Jun  4 16:55 init_data.xml
[2025-06-04 21:54:18] -rw-r--r--. 2 boinc boinc 223087230 Jun  4 16:55 EVNT.44871834._002586.pool.root.1
[2025-06-04 21:54:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:55 start_atlas.sh
[2025-06-04 21:54:18] drwxrwx--x. 2 boinc boinc        68 Jun  4 16:55 shared
[2025-06-04 21:54:18] -rw-r--r--. 2 boinc boinc    508875 Jun  4 16:55 input.tar.gz
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc         0 Jun  4 16:55 boinc_lockfile
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc      2559 Jun  4 16:55 pandaJob.out
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc    987207 Jun  4 16:55 agis_schedconf.cvmfs.json
[2025-06-04 21:54:18] drwx------. 4 boinc boinc      4096 Jun  4 16:55 pilot3
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc 196503989 Jun  4 21:41 HITS.44871837._065609.pool.root.1
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:41 boinc_task_state.xml
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc      1016 Jun  4 21:42 memory_monitor_summary.json
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc   1598969 Jun  4 21:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc    412925 Jun  4 21:42 log.44871837._065609.job.log.tgz.1
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc        95 Jun  4 21:43 pilot_heartbeat.json
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc      7687 Jun  4 21:43 heartbeat.json
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc      4675 Jun  4 21:44 pilotlog.txt
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc   1486431 Jun  4 21:44 log.44871837._065609.job.log.1
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc       357 Jun  4 21:44 output.list
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:44 runtime_log
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc   1914880 Jun  4 21:44 result.tar.gz
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc      8673 Jun  4 21:44 runtime_log.err
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc       656 Jun  4 21:44 kC6LDmfO6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG5YKDmfl83To.diag
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:54 boinc_mmap_file
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:54 wrapper_checkpoint.txt
[2025-06-04 21:54:18] -rw-r--r--. 1 boinc boinc     20422 Jun  4 21:54 stderr.txt
[2025-06-04 21:54:18] HITS file was successfully produced:
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc 196503989 Jun  4 21:41 shared/HITS.pool.root.1
[2025-06-04 21:54:18]  *** Contents of shared directory: ***
[2025-06-04 21:54:18] total 412148
[2025-06-04 21:54:18] -rw-r--r--. 2 boinc boinc 223087230 Jun  4 16:55 ATLAS.root_0
[2025-06-04 21:54:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:55 start_atlas.sh
[2025-06-04 21:54:18] -rw-r--r--. 2 boinc boinc    508875 Jun  4 16:55 input.tar.gz
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc 196503989 Jun  4 21:41 HITS.pool.root.1
[2025-06-04 21:54:18] -rw-------. 1 boinc boinc   1914880 Jun  4 21:44 result.tar.gz
21:54:20 (7547): run_atlas exited; CPU time 63628.650833
21:54:20 (7547): called boinc_finish(0)

</stderr_txt>
]]>

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