Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:03:30 (26261): wrapper (7.7.26015): starting
03:03:30 (26261): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:03:30] Arguments: --nthreads 8
[2025-06-04 03:03:30] Threads: 8
[2025-06-04 03:03:30] Checking for CVMFS
[2025-06-04 03:03:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:03:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:03:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:03:31] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/patatrack.cern.ch: Transport endpoint is not connected
[2025-06-04 03:03:31] 
[2025-06-04 03:03:31] CVMFS is ok
[2025-06-04 03:03:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:03:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:03:31] Further information can be found at the LHC@home message board.
[2025-06-04 03:03:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:03:31] Checking for apptainer binary...
[2025-06-04 03:03:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:03:31] Running /usr/bin/apptainer --version
[2025-06-04 03:03:31] apptainer version 1.3.2-1.el7
[2025-06-04 03:03:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:03:34] c-211-13.aglt2.org
[2025-06-04 03:03:34] apptainer works
[2025-06-04 03:03:34] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:03:34] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:03:34] Starting ATLAS job with PandaID=6678212668
[2025-06-04 03:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:20:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:20:52] 2025-06-04 09:20:37,796 | INFO     | extracted standard info from prmon json
[2025-06-04 05:20:52] 2025-06-04 09:20:37,796 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:20:52] 2025-06-04 09:20:37,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:20:52] 2025-06-04 09:20:37,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:20:52] 2025-06-04 09:20:37,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:20:52] 2025-06-04 09:20:37,800 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:20:52] 2025-06-04 09:20:37,801 | INFO     | sum of square deviations: 729472282.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,802 | INFO     | sum of deviations: 14819303704.999998
[2025-06-04 05:20:52] 2025-06-04 09:20:37,802 | INFO     | mean x: 1749024769.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,802 | INFO     | mean y: 2422978.8195488723
[2025-06-04 05:20:52] 2025-06-04 09:20:37,802 | INFO     | -- intersect: -35529193340.19292
[2025-06-04 05:20:52] 2025-06-04 09:20:37,802 | INFO     | intersect: -35529193340.19292
[2025-06-04 05:20:52] 2025-06-04 09:20:37,802 | INFO     | chi2: 2.3239258464851327
[2025-06-04 05:20:52] 2025-06-04 09:20:37,803 | INFO     | sum of square deviations: 650252192.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,804 | INFO     | sum of deviations: 22621204467.5
[2025-06-04 05:20:52] 2025-06-04 09:20:37,804 | INFO     | mean x: 1749024616.5
[2025-06-04 05:20:52] 2025-06-04 09:20:37,804 | INFO     | mean y: 2437485.6796875
[2025-06-04 05:20:52] 2025-06-04 09:20:37,804 | INFO     | -- intersect: -60843252779.27104
[2025-06-04 05:20:52] 2025-06-04 09:20:37,804 | INFO     | intersect: -60843252779.27104
[2025-06-04 05:20:52] 2025-06-04 09:20:37,805 | INFO     | chi2: 1.552292682199102
[2025-06-04 05:20:52] 2025-06-04 09:20:37,805 | INFO     | current chi2=1.552292682199102 (change=33.203863430199476 %)
[2025-06-04 05:20:52] 2025-06-04 09:20:37,805 | INFO     | sum of square deviations: 576985702.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,806 | INFO     | sum of deviations: 21527088306.999996
[2025-06-04 05:20:52] 2025-06-04 09:20:37,806 | INFO     | mean x: 1749024464.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,806 | INFO     | mean y: 2435207.138211382
[2025-06-04 05:20:52] 2025-06-04 09:20:37,806 | INFO     | -- intersect: -65252915067.78304
[2025-06-04 05:20:52] 2025-06-04 09:20:37,806 | INFO     | intersect: -65252915067.78304
[2025-06-04 05:20:52] 2025-06-04 09:20:37,807 | INFO     | chi2: 1.5540705589715982
[2025-06-04 05:20:52] 2025-06-04 09:20:37,807 | INFO     | current chi2=1.5540705589715982 (change=-0.1145323168036453 %)
[2025-06-04 05:20:52] 2025-06-04 09:20:37,807 | INFO     | right removable region: 122
[2025-06-04 05:20:52] 2025-06-04 09:20:37,807 | INFO     | sum of square deviations: 650252192.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,808 | INFO     | sum of deviations: -5747701942.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,808 | INFO     | mean x: 1749024921.5
[2025-06-04 05:20:52] 2025-06-04 09:20:37,808 | INFO     | mean y: 2461934.03125
[2025-06-04 05:20:52] 2025-06-04 09:20:37,809 | INFO     | -- intersect: 15462423563.675316
[2025-06-04 05:20:52] 2025-06-04 09:20:37,809 | INFO     | intersect: 15462423563.675316
[2025-06-04 05:20:52] 2025-06-04 09:20:37,809 | INFO     | chi2: 0.8224337232175598
[2025-06-04 05:20:52] 2025-06-04 09:20:37,809 | INFO     | current chi2=0.8224337232175598 (change=64.61015636701723 %)
[2025-06-04 05:20:52] 2025-06-04 09:20:37,809 | INFO     | sum of square deviations: 576985702.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,810 | INFO     | sum of deviations: -6702847628.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,810 | INFO     | mean x: 1749025074.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,810 | INFO     | mean y: 2463856.8048780486
[2025-06-04 05:20:52] 2025-06-04 09:20:37,810 | INFO     | -- intersect: 20320902473.11122
[2025-06-04 05:20:52] 2025-06-04 09:20:37,811 | INFO     | intersect: 20320902473.11122
[2025-06-04 05:20:52] 2025-06-04 09:20:37,811 | INFO     | chi2: 0.8097800899611534
[2025-06-04 05:20:52] 2025-06-04 09:20:37,811 | INFO     | current chi2=0.8097800899611534 (change=1.5385596309089045 %)
[2025-06-04 05:20:52] 2025-06-04 09:20:37,811 | INFO     | left removable region: 20
[2025-06-04 05:20:52] 2025-06-04 09:20:37,811 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 05:20:52] 2025-06-04 09:20:37,812 | INFO     | sum of deviations: 1465818898.0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,812 | INFO     | mean x: 1749025043.5
[2025-06-04 05:20:52] 2025-06-04 09:20:37,812 | INFO     | mean y: 2479654.7843137253
[2025-06-04 05:20:52] 2025-06-04 09:20:37,812 | INFO     | -- intersect: -7789344633.114814
[2025-06-04 05:20:52] 2025-06-04 09:20:37,813 | INFO     | intersect: -7789344633.114814
[2025-06-04 05:20:52] 2025-06-04 09:20:37,813 | INFO     | chi2: 0.00011438103886298308
[2025-06-04 05:20:52] 2025-06-04 09:20:37,813 | INFO     | -- intersect: -7789344633.114814
[2025-06-04 05:20:52] 2025-06-04 09:20:37,813 | INFO     | current memory leak: 4.45 B/s (using 102 data points, chi2=0.00)
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | ..............................
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | . Timing measurements:
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | . get job = 0 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | . initial setup = 2 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | . payload setup = 32 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | . stage-in = 0 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,814 | INFO     | . payload execution = 8098 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,815 | INFO     | . stage-out = 1 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,815 | INFO     | . log creation = 0 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,815 | INFO     | ..............................
[2025-06-04 05:20:52] 2025-06-04 09:20:37,928 | INFO     | 
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | job summary report
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | --------------------------------------------------
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | PanDA job id: 6678212668
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | task id: 45006595
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | errors: (none)
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | pilot state: finished 
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | transexitcode: 0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | exeerrorcode: 0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,929 | INFO     | exeerrordiag: 
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | exitcode: 0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | exitmsg: OK
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | cpuconsumptiontime: 46017 s
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | nevents: 400
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | neventsw: 0
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | pid: 4935
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | pgrp: 4935
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | corecount: 8
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | event service: False
[2025-06-04 05:20:52] 2025-06-04 09:20:37,930 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 14: 2405446, 23: 2405474, 8134: 2433210, 8137: 2442207, 8155: 2442321}
[2025-06-04 05:20:52] 2025-06-04 09:20:37,931 | INFO     | --------------------------------------------------
[2025-06-04 05:20:52] 2025-06-04 09:20:37,931 | INFO     | 
[2025-06-04 05:20:52] 2025-06-04 09:20:37,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 05:20:52] 2025-06-04 09:20:38,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,047 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:20:52] 2025-06-04 09:20:38,050 | INFO     | job 6678212668 has completed (purged errors)
[2025-06-04 05:20:52] 2025-06-04 09:20:38,050 | INFO     | overall cleanup function is called
[2025-06-04 05:20:52] 2025-06-04 09:20:39,058 | INFO     | --- collectZombieJob: --- 10, [4935]
[2025-06-04 05:20:52] 2025-06-04 09:20:39,058 | INFO     | zombie collector waiting for pid 4935
[2025-06-04 05:20:52] 2025-06-04 09:20:39,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:20:52] 2025-06-04 09:20:39,058 | INFO     | collected zombie processes
[2025-06-04 05:20:52] 2025-06-04 09:20:39,059 | INFO     | will attempt to kill all subprocesses of pid=4935
[2025-06-04 05:20:52] 2025-06-04 09:20:39,372 | INFO     | process IDs to be killed: [4935] (in reverse order)
[2025-06-04 05:20:52] 2025-06-04 09:20:39,506 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:20:52] 2025-06-04 09:20:39,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:20:52] 2025-06-04 09:20:39,524 | INFO     | did not find any defunct processes belonging to 4935
[2025-06-04 05:20:52] 2025-06-04 09:20:39,534 | INFO     | did not find any defunct processes belonging to 4935
[2025-06-04 05:20:52] 2025-06-04 09:20:39,534 | INFO     | ready for new job
[2025-06-04 05:20:52] 2025-06-04 09:20:39,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:20:52] 2025-06-04 09:20:39,536 | INFO     | **************************************
[2025-06-04 05:20:52] 2025-06-04 09:20:39,536 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:20:52] 2025-06-04 09:20:39,536 | INFO     | **************************************
[2025-06-04 05:20:52] 2025-06-04 09:20:39,536 | INFO     | 
[2025-06-04 05:20:52] 2025-06-04 09:20:39,539 | INFO     | architecture information:
[2025-06-04 05:20:52] 2025-06-04 09:20:39,539 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:20:52] 2025-06-04 09:20:39,621 | INFO     | cat /etc/os-release:
[2025-06-04 05:20:52] NAME="CentOS Linux"
[2025-06-04 05:20:52] VERSION="7 (Core)"
[2025-06-04 05:20:52] ID="centos"
[2025-06-04 05:20:52] ID_LIKE="rhel fedora"
[2025-06-04 05:20:52] VERSION_ID="7"
[2025-06-04 05:20:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:20:52] ANSI_COLOR="0;31"
[2025-06-04 05:20:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:20:52] HOME_URL="https://www.centos.org/"
[2025-06-04 05:20:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:20:52] 
[2025-06-04 05:20:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:20:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:20:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:20:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:20:52] 
[2025-06-04 05:20:52] 2025-06-04 09:20:39,621 | INFO     | **************************************
[2025-06-04 05:20:52] 2025-06-04 09:20:40,124 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 05:20:52] 2025-06-04 09:20:40,186 | INFO     | sufficient remaining disk space (56683921408 B)
[2025-06-04 05:20:52] 2025-06-04 09:20:40,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:20:52] 2025-06-04 09:20:40,187 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:20:52] 2025-06-04 09:20:40,187 | INFO     | update_server=False
[2025-06-04 05:20:52] 2025-06-04 09:20:40,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:20:52] 2025-06-04 09:20:40,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:20:52] 2025-06-04 09:20:40,229 | INFO     | PID=40596 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 05:20:52] 2025-06-04 09:20:40,229 | INFO     | .. there are 30 such processes running
[2025-06-04 05:20:52] 2025-06-04 09:20:40,229 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:20:52] 2025-06-04 09:20:40,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:20:52] 2025-06-04 09:20:40,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:20:52] 2025-06-04 09:20:40,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:20:52] 2025-06-04 09:20:40,368 | INFO     | aborting loop
[2025-06-04 05:20:52] 2025-06-04 09:20:40,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:20:52] 2025-06-04 09:20:40,648 | INFO     | all payload control threads have been joined
[2025-06-04 05:20:52] 2025-06-04 09:20:40,832 | INFO     | all job control threads have been joined
[2025-06-04 05:20:52] 2025-06-04 09:20:40,854 | INFO     | all data control threads have been joined
[2025-06-04 05:20:52] 2025-06-04 09:20:41,193 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,373 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,456 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,568 | INFO     | [job] validate thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,654 | INFO     | [payload] control thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,838 | INFO     | [job] control thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,856 | INFO     | [data] control thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:41,914 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:42,375 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:42,455 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:42,537 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:42,558 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:42,701 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:42,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:20:52] 2025-06-04 09:20:43,951 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:44,200 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:20:52] 2025-06-04 09:20:46,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532939454272)>', '<ExcThread(monitor, started 140532630136576)>']
[2025-06-04 05:20:52] 2025-06-04 09:20:46,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:20:52] 2025-06-04 09:20:46,287 | INFO     | [monitor] control thread has ended
[2025-06-04 05:20:52] 2025-06-04 09:20:51,179 | INFO     | all workflow threads have been joined
[2025-06-04 05:20:52] 2025-06-04 09:20:51,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:20:52] 2025-06-04 09:20:51,180 | INFO     | traces error code: 0
[2025-06-04 05:20:52] 2025-06-04 09:20:51,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:20:52] 2025-06-04 09:20:51,583 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:20:52] 2025-06-04 09:20:51,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:20:52] 2025-06-04 09:20:51,629 [wrapper] pilotpid: 40596
[2025-06-04 05:20:52] 2025-06-04 09:20:51,633 [wrapper] Pilot exit status: 0
[2025-06-04 05:20:52] 2025-06-04 09:20:51,667 [wrapper] pandaids: 6678212668
[2025-06-04 05:20:52] 2025-06-04 09:20:51,773 [wrapper] cleanup supervisor_pilot 42193 40597
[2025-06-04 05:20:52] 2025-06-04 09:20:51,779 [wrapper] Test setup, not cleaning
[2025-06-04 05:20:52] 2025-06-04 09:20:51,799 [wrapper] apfmon messages muted
[2025-06-04 05:20:52] 2025-06-04 09:20:51,806 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:20:52] 2025-06-04 09:20:51,818 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:20:52]  *** Error codes and diagnostics ***
[2025-06-04 05:20:52]     "exeErrorCode": 0,
[2025-06-04 05:20:52]     "exeErrorDiag": "",
[2025-06-04 05:20:52]     "pilotErrorCode": 0,
[2025-06-04 05:20:52]     "pilotErrorDiag": "",
[2025-06-04 05:20:52]  *** Listing of results directory ***
[2025-06-04 05:20:52] total 388196
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:42 pilot3.tar.gz
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 19:46 queuedata.json
[2025-06-04 05:20:52] -rwx------ 1 boincer umatlas     37140 Jun  3 19:47 runpilot2-wrapper.sh
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:20:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:03 run_atlas
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:03 job.xml
[2025-06-04 05:20:52] -rw-r--r-- 2 boincer umatlas 215047511 Jun  4 03:03 EVNT.45006593._001946.pool.root.1
[2025-06-04 05:20:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:03 start_atlas.sh
[2025-06-04 05:20:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:03 shared
[2025-06-04 05:20:52] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 03:03 input.tar.gz
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:03 boinc_lockfile
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 03:03 pandaJob.out
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas    986745 Jun  4 03:04 agis_schedconf.cvmfs.json
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas   1603667 Jun  4 03:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:20:52] drwx------ 4 boincer umatlas      4096 Jun  4 03:04 pilot3
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas 176418916 Jun  4 05:19 HITS.45006595._048527.pool.root.1
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:19 boinc_task_state.xml
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas      1059 Jun  4 05:20 memory_monitor_summary.json
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas    354936 Jun  4 05:20 log.45006595._048527.job.log.tgz.1
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas      6047 Jun  4 05:20 init_data.xml
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas        95 Jun  4 05:20 pilot_heartbeat.json
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas      7748 Jun  4 05:20 heartbeat.json
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:20 wrapper_checkpoint.txt
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:20 boinc_mmap_file
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas      4747 Jun  4 05:20 pilotlog.txt
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas    749953 Jun  4 05:20 log.45006595._048527.job.log.1
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas       357 Jun  4 05:20 output.list
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:20 runtime_log
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas   1126400 Jun  4 05:20 result.tar.gz
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 05:20 runtime_log.err
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas       658 Jun  4 05:20 42rMDmMXqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnXmKDmr5MW9n.diag
[2025-06-04 05:20:52] -rw-r--r-- 1 boincer umatlas     20567 Jun  4 05:20 stderr.txt
[2025-06-04 05:20:52] HITS file was successfully produced:
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas 176418916 Jun  4 05:19 shared/HITS.pool.root.1
[2025-06-04 05:20:52]  *** Contents of shared directory: ***
[2025-06-04 05:20:52] total 383916
[2025-06-04 05:20:52] -rw-r--r-- 2 boincer umatlas 215047511 Jun  4 03:03 ATLAS.root_0
[2025-06-04 05:20:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:03 start_atlas.sh
[2025-06-04 05:20:52] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 03:03 input.tar.gz
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas 176418916 Jun  4 05:19 HITS.pool.root.1
[2025-06-04 05:20:52] -rw------- 1 boincer umatlas   1126400 Jun  4 05:20 result.tar.gz
05:20:54 (26261): run_atlas exited; CPU time 46316.124932
05:20:54 (26261): called boinc_finish(0)

</stderr_txt>
]]>

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