Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:42:49 (29652): wrapper (7.7.26015): starting
21:42:49 (29652): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:42:49] Arguments: --nthreads 8
[2025-06-04 21:42:49] Threads: 8
[2025-06-04 21:42:49] Checking for CVMFS
[2025-06-04 21:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:42:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:42:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:42:51] 2.11.2.0 8450 33655 94900 146792 0 16 16890807 25165824 3908 130560 0 17871522 99.774 20438577 2020 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:42:51] CVMFS is ok
[2025-06-04 21:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:42:51] Checking for apptainer binary...
[2025-06-04 21:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:42:51] Running /usr/bin/apptainer --version
[2025-06-04 21:42:51] apptainer version 1.3.2-1.el7
[2025-06-04 21:42:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:42:56] cg-vwn262.simple-grid.lan
[2025-06-04 21:42:56] apptainer works
[2025-06-04 21:42:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:42:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:42:56] Starting ATLAS job with PandaID=6678247890
[2025-06-04 21:42:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:44:16]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:44:16] 2025-06-04 23:41:46,170 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:44:16] 2025-06-04 23:41:46,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:44:16] 2025-06-04 23:41:46,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:44:16] 2025-06-04 23:41:46,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:44:16] 2025-06-04 23:41:46,176 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:44:16] 2025-06-04 23:41:46,176 | INFO     | sum of square deviations: 3392567795.5
[2025-06-05 01:44:16] 2025-06-04 23:41:46,178 | INFO     | sum of deviations: 102603427522.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,179 | INFO     | mean x: 1749073626.5
[2025-06-05 01:44:16] 2025-06-04 23:41:46,179 | INFO     | mean y: 2412004.720720721
[2025-06-05 01:44:16] 2025-06-04 23:41:46,179 | INFO     | -- intersect: -52895852638.73804
[2025-06-05 01:44:16] 2025-06-04 23:41:46,179 | INFO     | intersect: -52895852638.73804
[2025-06-05 01:44:16] 2025-06-04 23:41:46,179 | INFO     | chi2: 7.711471401835769
[2025-06-05 01:44:16] 2025-06-04 23:41:46,180 | INFO     | sum of square deviations: 3168461268.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,182 | INFO     | sum of deviations: 114700398095.00002
[2025-06-05 01:44:16] 2025-06-04 23:41:46,182 | INFO     | mean x: 1749073474.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,182 | INFO     | mean y: 2420054.059907834
[2025-06-05 01:44:16] 2025-06-04 23:41:46,182 | INFO     | -- intersect: -63315199066.41616
[2025-06-05 01:44:16] 2025-06-04 23:41:46,182 | INFO     | intersect: -63315199066.41616
[2025-06-05 01:44:16] 2025-06-04 23:41:46,183 | INFO     | chi2: 7.012901513855767
[2025-06-05 01:44:16] 2025-06-04 23:41:46,183 | INFO     | current chi2=7.012901513855767 (change=9.058840415510096 %)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,183 | INFO     | right removable region: 216
[2025-06-05 01:44:16] 2025-06-04 23:41:46,184 | INFO     | sum of square deviations: 3168461268.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,185 | INFO     | sum of deviations: 25640126340.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,185 | INFO     | mean x: 1749073779.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,186 | INFO     | mean y: 2464343.4423963134
[2025-06-05 01:44:16] 2025-06-04 23:41:46,186 | INFO     | -- intersect: -14151558343.995815
[2025-06-05 01:44:16] 2025-06-04 23:41:46,186 | INFO     | intersect: -14151558343.995815
[2025-06-05 01:44:16] 2025-06-04 23:41:46,186 | INFO     | chi2: 2.6843886822120426
[2025-06-05 01:44:16] 2025-06-04 23:41:46,186 | INFO     | current chi2=2.6843886822120426 (change=65.18966948936612 %)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,187 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,204 | INFO     | sum of deviations: -19378761850.5
[2025-06-05 01:44:16] 2025-06-04 23:41:46,204 | INFO     | mean x: 1749073931.5
[2025-06-05 01:44:16] 2025-06-04 23:41:46,204 | INFO     | mean y: 2496282.797169811
[2025-06-05 01:44:16] 2025-06-04 23:41:46,204 | INFO     | -- intersect: 11474990541.170809
[2025-06-05 01:44:16] 2025-06-04 23:41:46,205 | INFO     | intersect: 11474990541.170809
[2025-06-05 01:44:16] 2025-06-04 23:41:46,205 | INFO     | chi2: 0.9066686912236838
[2025-06-05 01:44:16] 2025-06-04 23:41:46,205 | INFO     | current chi2=0.9066686912236838 (change=66.22438854582889 %)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,206 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,207 | INFO     | sum of deviations: -20195786609.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,207 | INFO     | mean x: 1749074084.0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,208 | INFO     | mean y: 2496828.164251208
[2025-06-05 01:44:16] 2025-06-04 23:41:46,208 | INFO     | -- intersect: 12846182056.408783
[2025-06-05 01:44:16] 2025-06-04 23:41:46,208 | INFO     | intersect: 12846182056.408783
[2025-06-05 01:44:16] 2025-06-04 23:41:46,208 | INFO     | chi2: 0.8714440349171381
[2025-06-05 01:44:16] 2025-06-04 23:41:46,208 | INFO     | current chi2=0.8714440349171381 (change=3.885063711531144 %)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,208 | INFO     | left removable region: 30
[2025-06-05 01:44:16] 2025-06-04 23:41:46,209 | INFO     | sum of square deviations: 1995283922.5
[2025-06-05 01:44:16] 2025-06-04 23:41:46,210 | INFO     | sum of deviations: 5420420350.000001
[2025-06-05 01:44:16] 2025-06-04 23:41:46,210 | INFO     | mean x: 1749074358.5
[2025-06-05 01:44:16] 2025-06-04 23:41:46,210 | INFO     | mean y: 2497773.419354839
[2025-06-05 01:44:16] 2025-06-04 23:41:46,211 | INFO     | -- intersect: -4749065720.661071
[2025-06-05 01:44:16] 2025-06-04 23:41:46,211 | INFO     | intersect: -4749065720.661071
[2025-06-05 01:44:16] 2025-06-04 23:41:46,211 | INFO     | chi2: 0.0007369474388178961
[2025-06-05 01:44:16] 2025-06-04 23:41:46,211 | INFO     | -- intersect: -4749065720.661071
[2025-06-05 01:44:16] 2025-06-04 23:41:46,211 | INFO     | current memory leak: 2.72 B/s (using 186 data points, chi2=0.00)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,212 | INFO     | ..............................
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . Timing measurements:
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . get job = 0 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . initial setup = 13 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . payload setup = 171 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . stage-in = 0 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . payload execution = 13688 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . stage-out = 3 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | . log creation = 1 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,213 | INFO     | ..............................
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | 
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | job summary report
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | --------------------------------------------------
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | PanDA job id: 6678247890
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | task id: 45006595
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | errors: (none)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:44:16] 2025-06-04 23:41:46,357 | INFO     | pilot state: finished 
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | transexitcode: 0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | exeerrorcode: 0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | exeerrordiag: 
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | exitcode: 0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | exitmsg: OK
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | cpuconsumptiontime: 50751 s
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | nevents: 400
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | neventsw: 0
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | pid: 9924
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | pgrp: 9924
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | corecount: 8
[2025-06-05 01:44:16] 2025-06-04 23:41:46,358 | INFO     | event service: False
[2025-06-05 01:44:16] 2025-06-04 23:41:46,359 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397371, 23: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 65: 2397667, 76: 2397695, 87: 2397751, 90: 2397985, 98: 2398293, 1
[2025-06-05 01:44:16] 2025-06-04 23:41:46,359 | INFO     | --------------------------------------------------
[2025-06-05 01:44:16] 2025-06-04 23:41:46,359 | INFO     | 
[2025-06-05 01:44:16] 2025-06-04 23:41:46,359 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 01:44:16] 2025-06-04 23:41:46,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:44:16] 2025-06-04 23:41:46,927 | INFO     | job 6678247890 has completed (purged errors)
[2025-06-05 01:44:16] 2025-06-04 23:41:46,927 | INFO     | overall cleanup function is called
[2025-06-05 01:44:16] 2025-06-04 23:41:47,731 | INFO     | PID=3285 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 01:44:16] 2025-06-04 23:41:47,732 | INFO     | .. there are 9 such processes running
[2025-06-05 01:44:16] 2025-06-04 23:41:47,937 | INFO     | --- collectZombieJob: --- 10, [9924]
[2025-06-05 01:44:16] 2025-06-04 23:41:47,937 | INFO     | zombie collector waiting for pid 9924
[2025-06-05 01:44:16] 2025-06-04 23:41:47,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:44:16] 2025-06-04 23:41:47,937 | INFO     | collected zombie processes
[2025-06-05 01:44:16] 2025-06-04 23:41:47,937 | INFO     | will attempt to kill all subprocesses of pid=9924
[2025-06-05 01:44:16] 2025-06-04 23:41:48,065 | INFO     | process IDs to be killed: [9924] (in reverse order)
[2025-06-05 01:44:16] 2025-06-04 23:41:48,551 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:44:16] 2025-06-04 23:41:48,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:44:16] 2025-06-04 23:41:48,556 | INFO     | did not find any defunct processes belonging to 9924
[2025-06-05 01:44:16] 2025-06-04 23:41:48,559 | INFO     | did not find any defunct processes belonging to 9924
[2025-06-05 01:44:16] 2025-06-04 23:41:48,560 | INFO     | ready for new job
[2025-06-05 01:44:16] 2025-06-04 23:41:48,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:44:16] 2025-06-04 23:41:48,562 | INFO     | **************************************
[2025-06-05 01:44:16] 2025-06-04 23:41:48,562 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:44:16] 2025-06-04 23:41:48,562 | INFO     | **************************************
[2025-06-05 01:44:16] 2025-06-04 23:41:48,562 | INFO     | 
[2025-06-05 01:44:16] 2025-06-04 23:41:48,563 | INFO     | pilot is running in a VM
[2025-06-05 01:44:16] 2025-06-04 23:41:48,563 | INFO     | architecture information:
[2025-06-05 01:44:16] 2025-06-04 23:41:48,566 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:44:16] 2025-06-04 23:41:48,650 | INFO     | cat /etc/os-release:
[2025-06-05 01:44:16] NAME="CentOS Linux"
[2025-06-05 01:44:16] VERSION="7 (Core)"
[2025-06-05 01:44:16] ID="centos"
[2025-06-05 01:44:16] ID_LIKE="rhel fedora"
[2025-06-05 01:44:16] VERSION_ID="7"
[2025-06-05 01:44:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:44:16] ANSI_COLOR="0;31"
[2025-06-05 01:44:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:44:16] HOME_URL="https://www.centos.org/"
[2025-06-05 01:44:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:44:16] 
[2025-06-05 01:44:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:44:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:44:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:44:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:44:16] 
[2025-06-05 01:44:16] 2025-06-04 23:41:48,651 | INFO     | **************************************
[2025-06-05 01:44:16] 2025-06-04 23:41:49,155 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 01:44:16] 2025-06-04 23:41:49,344 | INFO     | sufficient remaining disk space (496732471296 B)
[2025-06-05 01:44:16] 2025-06-04 23:41:49,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:44:16] 2025-06-04 23:41:49,345 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:44:16] 2025-06-04 23:41:49,345 | INFO     | update_server=False
[2025-06-05 01:44:16] 2025-06-04 23:41:49,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:44:16] 2025-06-04 23:41:49,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:44:16] 2025-06-04 23:41:49,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:44:16] 2025-06-04 23:41:49,346 | INFO     | aborting loop
[2025-06-05 01:44:16] 2025-06-04 23:41:49,372 | INFO     | all job control threads have been joined
[2025-06-05 01:44:16] 2025-06-04 23:41:49,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:44:16] 2025-06-04 23:41:49,539 | INFO     | all data control threads have been joined
[2025-06-05 01:44:16] 2025-06-04 23:41:49,738 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:44:16] 2025-06-04 23:41:49,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:44:16] 2025-06-04 23:41:49,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:44:16] 2025-06-04 23:41:50,350 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:50,353 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:50,378 | INFO     | [job] control thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:50,517 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:50,526 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:50,545 | INFO     | [data] control thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:50,585 | INFO     | all payload control threads have been joined
[2025-06-05 01:44:16] 2025-06-04 23:41:51,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,101 | INFO     | [job] validate thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,187 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:44:16] 2025-06-04 23:41:51,472 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,591 | INFO     | [payload] control thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,730 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,816 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:51,817 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:52,381 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:53,355 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:44:16] 2025-06-04 23:41:55,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282952496960)>', '<ExcThread(monitor, started 140282087601920)>']
[2025-06-05 01:44:16] 2025-06-04 23:41:55,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:44:16] 2025-06-04 23:41:55,775 | INFO     | [monitor] control thread has ended
[2025-06-05 01:44:16] 2025-06-04 23:42:00,033 | INFO     | all workflow threads have been joined
[2025-06-05 01:44:16] 2025-06-04 23:42:00,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:44:16] 2025-06-04 23:42:00,033 | INFO     | traces error code: 0
[2025-06-05 01:44:16] 2025-06-04 23:42:00,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:44:16] 2025-06-04 23:42:00,337 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:44:16] 2025-06-04 23:42:00,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:44:16] 2025-06-04 23:42:00,404 [wrapper] pilotpid: 3285
[2025-06-05 01:44:16] 2025-06-04 23:42:00,438 [wrapper] Pilot exit status: 0
[2025-06-05 01:44:16] 2025-06-04 23:42:00,705 [wrapper] pandaids: 6678247890
[2025-06-05 01:44:16] 2025-06-04 23:42:01,325 [wrapper] cleanup supervisor_pilot 19257 3286
[2025-06-05 01:44:16] 2025-06-04 23:42:01,415 [wrapper] Test setup, not cleaning
[2025-06-05 01:44:16] 2025-06-04 23:42:01,522 [wrapper] apfmon messages muted
[2025-06-05 01:44:16] 2025-06-04 23:42:01,642 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:44:16] 2025-06-04 23:42:01,740 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:44:16]  *** Error codes and diagnostics ***
[2025-06-05 01:44:16]     "exeErrorCode": 0,
[2025-06-05 01:44:16]     "exeErrorDiag": "",
[2025-06-05 01:44:16]     "pilotErrorCode": 0,
[2025-06-05 01:44:16]     "pilotErrorDiag": "",
[2025-06-05 01:44:16]  *** Listing of results directory ***
[2025-06-05 01:44:16] total 388992
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:17 queuedata.json
[2025-06-05 01:44:16] -rwx------. 1 boinc boinc     37140 Jun  4 04:20 runpilot2-wrapper.sh
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:44:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:42 run_atlas
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:42 job.xml
[2025-06-05 01:44:16] -rw-r--r--. 2 boinc boinc 212698225 Jun  4 21:42 EVNT.45006593._002027.pool.root.1
[2025-06-05 01:44:16] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:42 start_atlas.sh
[2025-06-05 01:44:16] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:42 shared
[2025-06-05 01:44:16] -rw-r--r--. 2 boinc boinc    508880 Jun  4 21:42 input.tar.gz
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc      6392 Jun  4 21:42 init_data.xml
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:42 boinc_lockfile
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc      2525 Jun  4 21:42 pandaJob.out
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc    991007 Jun  4 21:45 agis_schedconf.cvmfs.json
[2025-06-05 01:44:16] drwx------. 4 boinc boinc      4096 Jun  4 21:46 pilot3
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc 178608286 Jun  5 01:38 HITS.45006595._050567.pool.root.1
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:39 boinc_task_state.xml
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc      1015 Jun  5 01:40 memory_monitor_summary.json
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc   1598969 Jun  5 01:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc    394461 Jun  5 01:40 log.45006595._050567.job.log.tgz.1
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc        95 Jun  5 01:41 pilot_heartbeat.json
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc      7689 Jun  5 01:41 heartbeat.json
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc      4417 Jun  5 01:42 pilotlog.txt
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc   1204701 Jun  5 01:42 log.45006595._050567.job.log.1
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc       357 Jun  5 01:42 output.list
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:42 runtime_log
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc   1617920 Jun  5 01:42 result.tar.gz
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc       657 Jun  5 01:42 yqHMDmdusg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCtmKDmc0Cp1m.diag
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc      8673 Jun  5 01:42 runtime_log.err
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc      8192 Jun  5 01:44 boinc_mmap_file
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc        28 Jun  5 01:44 wrapper_checkpoint.txt
[2025-06-05 01:44:16] -rw-r--r--. 1 boinc boinc     20575 Jun  5 01:44 stderr.txt
[2025-06-05 01:44:16] HITS file was successfully produced:
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc 178608286 Jun  5 01:38 shared/HITS.pool.root.1
[2025-06-05 01:44:16]  *** Contents of shared directory: ***
[2025-06-05 01:44:16] total 384236
[2025-06-05 01:44:16] -rw-r--r--. 2 boinc boinc 212698225 Jun  4 21:42 ATLAS.root_0
[2025-06-05 01:44:16] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:42 start_atlas.sh
[2025-06-05 01:44:16] -rw-r--r--. 2 boinc boinc    508880 Jun  4 21:42 input.tar.gz
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc 178608286 Jun  5 01:38 HITS.pool.root.1
[2025-06-05 01:44:16] -rw-------. 1 boinc boinc   1617920 Jun  5 01:42 result.tar.gz
01:44:18 (29652): run_atlas exited; CPU time 50947.962038
01:44:18 (29652): called boinc_finish(0)

</stderr_txt>
]]>

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