Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:04:43 (713272): wrapper (7.7.26015): starting
02:04:43 (713272): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 02:04:43] Arguments: --nthreads 12
[2025-06-06 02:04:43] Threads: 12
[2025-06-06 02:04:43] Checking for CVMFS
[2025-06-06 02:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:04:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:04:44] 2.12.7.0 4529 1725 47704 146838 1 56 2393450 4096001 394 130560 0 1986486 99.993 399112 137 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 02:04:44] CVMFS is ok
[2025-06-06 02:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:04:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 02:04:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 02:04:44] Further information can be found at the LHC@home message board.
[2025-06-06 02:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:04:44] Checking for apptainer binary...
[2025-06-06 02:04:44] apptainer is not installed, using version from CVMFS
[2025-06-06 02:04:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:04:46] martinpcalt
[2025-06-06 02:04:46] apptainer works
[2025-06-06 02:04:46] Set ATHENA_PROC_NUMBER=12
[2025-06-06 02:04:46] Set ATHENA_CORE_NUMBER=12
[2025-06-06 02:04:46] Starting ATLAS job with PandaID=6678075845
[2025-06-06 02:04:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:20:31]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:20:31] 2025-06-06 04:20:11,444 | INFO     | executing command: lscpu
[2025-06-06 04:20:31] 2025-06-06 04:20:11,451 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 04:20:31] 2025-06-06 04:20:12,658 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 04:20:31] 2025-06-06 04:20:12,658 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6678075845/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,659 | INFO     | extracted standard info from prmon json
[2025-06-06 04:20:31] 2025-06-06 04:20:12,659 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:20:31] 2025-06-06 04:20:12,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:20:31] 2025-06-06 04:20:12,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:20:31] 2025-06-06 04:20:12,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:20:31] 2025-06-06 04:20:12,661 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:20:31] 2025-06-06 04:20:12,661 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | sum of deviations: 25387237968.999996
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | mean x: 1749179540.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | mean y: 2623863.8195488723
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | -- intersect: -60872666847.34409
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | intersect: -60872666847.34409
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | chi2: 1.4899622639002796
[2025-06-06 04:20:31] 2025-06-06 04:20:12,662 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | sum of deviations: 23985165169.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | mean x: 1749179387.5
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | mean y: 2621172.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | -- intersect: -64517509687.31705
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | intersect: -64517509687.31705
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | chi2: 1.4915915894180078
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | current chi2=1.4915915894180078 (change=-0.10935347540031767 %)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | right removable region: 127
[2025-06-06 04:20:31] 2025-06-06 04:20:12,663 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | sum of deviations: 2315908157.5
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | mean x: 1749179692.5
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | mean y: 2667656.1171875
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | -- intersect: -6227129903.402753
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | intersect: -6227129903.402753
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | chi2: 0.002865405182687536
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | current chi2=0.002865405182687536 (change=99.80768605674704 %)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,664 | INFO     | sum of square deviations: 576985702.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | sum of deviations: 2079601995.9999998
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | mean x: 1749179845.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | mean y: 2668126.975609756
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | -- intersect: -6301817208.477243
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | intersect: -6301817208.477243
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | chi2: 0.0024640879314780854
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | current chi2=0.0024640879314780854 (change=14.005602196651463 %)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,665 | INFO     | left removable region: 20
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | sum of square deviations: 379832238.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | sum of deviations: 1363771632.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | mean x: 1749179967.0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | mean y: 2667609.803738318
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | -- intersect: -6277689294.123137
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | intersect: -6277689294.123137
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | chi2: 0.00062915389903856
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | -- intersect: -6277689294.123137
[2025-06-06 04:20:31] 2025-06-06 04:20:12,666 | INFO     | current memory leak: 3.59 B/s (using 107 data points, chi2=0.00)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | ..............................
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . Timing measurements:
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . get job = 0 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . initial setup = 1 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . payload setup = 8 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . stage-in = 0 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . payload execution = 8096 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . stage-out = 0 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | . log creation = 0 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,667 | INFO     | ..............................
[2025-06-06 04:20:31] 2025-06-06 04:20:12,719 | INFO     | 
[2025-06-06 04:20:31] 2025-06-06 04:20:12,719 | INFO     | job summary report
[2025-06-06 04:20:31] 2025-06-06 04:20:12,719 | INFO     | --------------------------------------------------
[2025-06-06 04:20:31] 2025-06-06 04:20:12,719 | INFO     | PanDA job id: 6678075845
[2025-06-06 04:20:31] 2025-06-06 04:20:12,719 | INFO     | task id: 45006595
[2025-06-06 04:20:31] 2025-06-06 04:20:12,719 | INFO     | errors: (none)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | pilot state: finished 
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | transexitcode: 0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | exeerrorcode: 0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | exeerrordiag: 
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | exitcode: 0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | exitmsg: OK
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | cpuconsumptiontime: 28031 s
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | nevents: 400
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | neventsw: 0
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | pid: 725453
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | pgrp: 725453
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | corecount: 12
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | event service: False
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | sizes: {0: 2397365, 2: 2397571, 11: 2397599, 8106: 2434082, 8110: 2434196}
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | --------------------------------------------------
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | 
[2025-06-06 04:20:31] 2025-06-06 04:20:12,720 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 04:20:31] 2025-06-06 04:20:12,726 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | job 6678075845 has completed (purged errors)
[2025-06-06 04:20:31] 2025-06-06 04:20:12,727 | INFO     | overall cleanup function is called
[2025-06-06 04:20:31] 2025-06-06 04:20:13,420 | WARNING  | process 725453 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 04:20:31] 2025-06-06 04:20:13,442 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:20:31] 2025-06-06 04:20:13,470 | INFO     | number of running child processes to parent process 725453: 1
[2025-06-06 04:20:31] 2025-06-06 04:20:13,470 | INFO     | maximum number of monitored processes: 6
[2025-06-06 04:20:31] 2025-06-06 04:20:13,470 | INFO     | aborting job monitoring since job object (job id=6678075845) has expired
[2025-06-06 04:20:31] 2025-06-06 04:20:13,732 | INFO     | --- collectZombieJob: --- 10, [725453]
[2025-06-06 04:20:31] 2025-06-06 04:20:13,732 | INFO     | zombie collector waiting for pid 725453
[2025-06-06 04:20:31] 2025-06-06 04:20:13,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:20:31] 2025-06-06 04:20:13,732 | INFO     | collected zombie processes
[2025-06-06 04:20:31] 2025-06-06 04:20:13,732 | INFO     | will attempt to kill all subprocesses of pid=725453
[2025-06-06 04:20:31] 2025-06-06 04:20:13,760 | INFO     | process IDs to be killed: [725453] (in reverse order)
[2025-06-06 04:20:31] 2025-06-06 04:20:13,775 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:20:31] 2025-06-06 04:20:13,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:20:31] 2025-06-06 04:20:13,776 | INFO     | did not find any defunct processes belonging to 725453
[2025-06-06 04:20:31] 2025-06-06 04:20:13,776 | INFO     | did not find any defunct processes belonging to 725453
[2025-06-06 04:20:31] 2025-06-06 04:20:13,776 | INFO     | ready for new job
[2025-06-06 04:20:31] 2025-06-06 04:20:13,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:20:31] 2025-06-06 04:20:13,777 | INFO     | **************************************
[2025-06-06 04:20:31] 2025-06-06 04:20:13,777 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:20:31] 2025-06-06 04:20:13,777 | INFO     | **************************************
[2025-06-06 04:20:31] 2025-06-06 04:20:13,777 | INFO     | 
[2025-06-06 04:20:31] 2025-06-06 04:20:13,796 | INFO     | architecture information:
[2025-06-06 04:20:31] 2025-06-06 04:20:13,796 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:20:31] 2025-06-06 04:20:13,802 | INFO     | cat /etc/os-release:
[2025-06-06 04:20:31] NAME="CentOS Linux"
[2025-06-06 04:20:31] VERSION="7 (Core)"
[2025-06-06 04:20:31] ID="centos"
[2025-06-06 04:20:31] ID_LIKE="rhel fedora"
[2025-06-06 04:20:31] VERSION_ID="7"
[2025-06-06 04:20:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:20:31] ANSI_COLOR="0;31"
[2025-06-06 04:20:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:20:31] HOME_URL="https://www.centos.org/"
[2025-06-06 04:20:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:20:31] 
[2025-06-06 04:20:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:20:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:20:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:20:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:20:31] 
[2025-06-06 04:20:31] 2025-06-06 04:20:13,802 | INFO     | **************************************
[2025-06-06 04:20:31] 2025-06-06 04:20:14,305 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 04:20:31] 2025-06-06 04:20:14,311 | INFO     | sufficient remaining disk space (277325283328 B)
[2025-06-06 04:20:31] 2025-06-06 04:20:14,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:20:31] 2025-06-06 04:20:14,311 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:20:31] 2025-06-06 04:20:14,311 | INFO     | update_server=False
[2025-06-06 04:20:31] 2025-06-06 04:20:14,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:20:31] 2025-06-06 04:20:14,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:20:31] 2025-06-06 04:20:14,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:20:31] 2025-06-06 04:20:14,312 | INFO     | will abort loop
[2025-06-06 04:20:31] 2025-06-06 04:20:14,556 | INFO     | all payload control threads have been joined
[2025-06-06 04:20:31] 2025-06-06 04:20:14,572 | INFO     | all data control threads have been joined
[2025-06-06 04:20:31] 2025-06-06 04:20:14,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:20:31] 2025-06-06 04:20:15,230 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:20:31] 2025-06-06 04:20:15,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:20:31] 2025-06-06 04:20:15,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:20:31] 2025-06-06 04:20:15,316 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,317 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,317 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:20:31] 2025-06-06 04:20:15,386 | INFO     | all job control threads have been joined
[2025-06-06 04:20:31] 2025-06-06 04:20:15,436 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,560 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,561 | INFO     | [payload] control thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,576 | INFO     | [data] control thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,635 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:15,904 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:16,096 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:16,325 | INFO     | [job] validate thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:16,391 | INFO     | [job] control thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:16,666 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:16,805 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:19,336 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:24,420 | INFO     | job.realtimelogging is not enabled
[2025-06-06 04:20:31] 2025-06-06 04:20:25,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:20:31] 2025-06-06 04:20:25,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869736437568)>', '<ExcThread(monitor, started 139869149976320)>']
[2025-06-06 04:20:31] 2025-06-06 04:20:26,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:20:31] 2025-06-06 04:20:26,280 | INFO     | [monitor] control thread has ended
[2025-06-06 04:20:31] 2025-06-06 04:20:30,833 | INFO     | all workflow threads have been joined
[2025-06-06 04:20:31] 2025-06-06 04:20:30,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:20:31] 2025-06-06 04:20:30,833 | INFO     | traces error code: 0
[2025-06-06 04:20:31] 2025-06-06 04:20:30,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:20:31] 2025-06-06 04:20:30,887 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:20:31] 2025-06-06 04:20:30,888 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:20:31] 2025-06-06 04:20:30,889 [wrapper] pilotpid: 716944
[2025-06-06 04:20:31] 2025-06-06 04:20:30,889 [wrapper] Pilot exit status: 0
[2025-06-06 04:20:31] 2025-06-06 04:20:30,909 [wrapper] pandaids: 6678075845
[2025-06-06 04:20:31] 2025-06-06 04:20:30,916 [wrapper] cleanup supervisor_pilot  778159 716945
[2025-06-06 04:20:31] 2025-06-06 04:20:30,917 [wrapper] Test setup, not cleaning
[2025-06-06 04:20:31] 2025-06-06 04:20:30,918 [wrapper] apfmon messages muted
[2025-06-06 04:20:31] 2025-06-06 04:20:30,919 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:20:31] 2025-06-06 04:20:30,920 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:20:31]  *** Error codes and diagnostics ***
[2025-06-06 04:20:31]     "exeErrorCode": 0,
[2025-06-06 04:20:31]     "exeErrorDiag": "",
[2025-06-06 04:20:31]     "pilotErrorCode": 0,
[2025-06-06 04:20:31]     "pilotErrorDiag": "",
[2025-06-06 04:20:31]  *** Listing of results directory ***
[2025-06-06 04:20:31] total 384844
[2025-06-06 04:20:31] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-06 04:20:31] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:49 queuedata.json
[2025-06-06 04:20:31] -rwx------ 1 boinc boinc     37140 Jun  3 21:49 runpilot2-wrapper.sh
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc       100 Jun  6 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:20:31] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 02:04 run_atlas
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc       105 Jun  6 02:04 job.xml
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc      9334 Jun  6 02:04 init_data.xml
[2025-06-06 04:20:31] -rw-r--r-- 2 boinc boinc 212890470 Jun  6 02:04 EVNT.45006593._001863.pool.root.1
[2025-06-06 04:20:31] drwxrwx--x 2 boinc boinc      4096 Jun  6 02:04 shared
[2025-06-06 04:20:31] -rw-r--r-- 2 boinc boinc    508881 Jun  6 02:04 input.tar.gz
[2025-06-06 04:20:31] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:04 start_atlas.sh
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc         0 Jun  6 02:04 boinc_lockfile
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 02:04 pandaJob.out
[2025-06-06 04:20:31] -rw------- 1 boinc boinc    987721 Jun  6 02:04 agis_schedconf.cvmfs.json
[2025-06-06 04:20:31] -rw------- 1 boinc boinc   1598969 Jun  6 02:04 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:20:31] drwx------ 4 boinc boinc      4096 Jun  6 02:04 pilot3
[2025-06-06 04:20:31] -rw------- 1 boinc boinc 174981390 Jun  6 04:19 HITS.45006595._046452.pool.root.1
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc       529 Jun  6 04:19 boinc_task_state.xml
[2025-06-06 04:20:31] -rw------- 1 boinc boinc      1031 Jun  6 04:20 memory_monitor_summary.json
[2025-06-06 04:20:31] -rw------- 1 boinc boinc    399679 Jun  6 04:20 log.45006595._046452.job.log.tgz.1
[2025-06-06 04:20:31] -rw------- 1 boinc boinc      7691 Jun  6 04:20 heartbeat.json
[2025-06-06 04:20:31] -rw------- 1 boinc boinc        95 Jun  6 04:20 pilot_heartbeat.json
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 04:20 boinc_mmap_file
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc        27 Jun  6 04:20 wrapper_checkpoint.txt
[2025-06-06 04:20:31] -rw------- 1 boinc boinc      4451 Jun  6 04:20 pilotlog.txt
[2025-06-06 04:20:31] -rw------- 1 boinc boinc    782999 Jun  6 04:20 log.45006595._046452.job.log.1
[2025-06-06 04:20:31] -rw------- 1 boinc boinc       357 Jun  6 04:20 output.list
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc       620 Jun  6 04:20 runtime_log
[2025-06-06 04:20:31] -rw------- 1 boinc boinc   1198080 Jun  6 04:20 result.tar.gz
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc      8978 Jun  6 04:20 runtime_log.err
[2025-06-06 04:20:31] -rw------- 1 boinc boinc       658 Jun  6 04:20 OSxNDm4gog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUImKDm1gZGJn.diag
[2025-06-06 04:20:31] -rw-rw-r-- 1 boinc boinc     21226 Jun  6 04:20 stderr.txt
[2025-06-06 04:20:31] HITS file was successfully produced:
[2025-06-06 04:20:31] -rw------- 1 boinc boinc 174981390 Jun  6 04:19 shared/HITS.pool.root.1
[2025-06-06 04:20:31]  *** Contents of shared directory: ***
[2025-06-06 04:20:31] total 380484
[2025-06-06 04:20:31] -rw-r--r-- 2 boinc boinc 212890470 Jun  6 02:04 ATLAS.root_0
[2025-06-06 04:20:31] -rw-r--r-- 2 boinc boinc    508881 Jun  6 02:04 input.tar.gz
[2025-06-06 04:20:31] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:04 start_atlas.sh
[2025-06-06 04:20:31] -rw------- 1 boinc boinc 174981390 Jun  6 04:19 HITS.pool.root.1
[2025-06-06 04:20:31] -rw------- 1 boinc boinc   1198080 Jun  6 04:20 result.tar.gz
04:20:32 (713272): run_atlas exited; CPU time 28063.192887
04:20:32 (713272): called boinc_finish(0)

</stderr_txt>
]]>

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