Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:27:56 (2444408): wrapper (7.7.26015): starting
19:27:56 (2444408): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:27:56] Arguments: --nthreads 8
[2025-06-04 19:27:56] Threads: 8
[2025-06-04 19:27:56] Checking for CVMFS
[2025-06-04 19:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:27:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:27:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:27:57] 2.12.7.0 1328384 2867 77136 146789 2 55 3189480 4096001 0 65024 0 2765173 99.992 683163 2188 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 19:27:57] CVMFS is ok
[2025-06-04 19:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:27:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 19:27:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 19:27:57] Further information can be found at the LHC@home message board.
[2025-06-04 19:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:27:57] Checking for apptainer binary...
[2025-06-04 19:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:27:57] Running /usr/bin/apptainer --version
[2025-06-04 19:27:57] apptainer version 1.3.6-1.el8
[2025-06-04 19:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:27:57] localhost.localdomain
[2025-06-04 19:27:57] apptainer works
[2025-06-04 19:27:57] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:27:57] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:27:57] Starting ATLAS job with PandaID=6678247065
[2025-06-04 19:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:35:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:35:41]  mtime=0
[2025-06-04 20:35:41]  protocol_id=None
[2025-06-04 20:35:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 20:35:41]  replicas=None
[2025-06-04 20:35:41]  scope=mc23_13p6TeV
[2025-06-04 20:35:41]  status=None
[2025-06-04 20:35:41]  status_code=0
[2025-06-04 20:35:41]  storage_token=
[2025-06-04 20:35:41]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678247065/log.45006595._050393.job.log.tgz.1
[2025-06-04 20:35:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/2f/log.45006595._050393.job.log.tgz.1
[2025-06-04 20:35:41]  workdir=None
[2025-06-04 20:35:41] ]
[2025-06-04 20:35:41] 2025-06-04 18:35:12,985 | INFO     | transferring file log.45006595._050393.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678247065/log.45006595._050393.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 20:35:41] 2025-06-04 18:35:12,985 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678247065/log.45006595._050393.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._050393.job
[2025-06-04 20:35:41] 2025-06-04 18:35:12,996 | INFO     | adding to output.list: log.45006595._050393.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/2f/log.45006595._050393.job.log.tg
[2025-06-04 20:35:41] 2025-06-04 18:35:12,997 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 20:35:41] 2025-06-04 18:35:12,997 | INFO     | summary of transferred files:
[2025-06-04 20:35:41] 2025-06-04 18:35:12,997 | INFO     |  -- lfn=log.45006595._050393.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 20:35:41] 2025-06-04 18:35:12,997 | INFO     | stage-out finished correctly
[2025-06-04 20:35:41] 2025-06-04 18:35:14,756 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 20:35:41] 2025-06-04 18:35:15,444 | INFO     | job 6678247065 has state=finished
[2025-06-04 20:35:41] 2025-06-04 18:35:15,444 | INFO     | preparing for final server update for job 6678247065 in state='finished'
[2025-06-04 20:35:41] 2025-06-04 18:35:15,445 | INFO     | this job has now completed (state=finished)
[2025-06-04 20:35:41] 2025-06-04 18:35:15,445 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 20:35:41] 2025-06-04 18:35:15,445 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:35:41] 2025-06-04 18:35:15,445 | INFO     | job 6678247065 has finished - writing final server update
[2025-06-04 20:35:41] 2025-06-04 18:35:15,445 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:35:41] 2025-06-04 18:35:15,446 | INFO     | executing command: lscpu
[2025-06-04 20:35:41] 2025-06-04 18:35:15,459 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:35:41] 2025-06-04 18:35:16,137 | WARNING  | process 2454474 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 20:35:41] 2025-06-04 18:35:16,137 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678247065/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:35:41] 2025-06-04 18:35:16,213 | INFO     | number of running child processes to parent process 2454474: 1
[2025-06-04 20:35:41] 2025-06-04 18:35:16,213 | INFO     | maximum number of monitored processes: 6
[2025-06-04 20:35:41] 2025-06-04 18:35:16,569 | INFO     | PID=2448040 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 20:35:41] 2025-06-04 18:35:18,715 | INFO     | monitor loop #303: job 0:6678247065 is in state 'finished'
[2025-06-04 20:35:41] 2025-06-04 18:35:18,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,218 | INFO     | monitor loop #304: job 0:6678247065 is in state 'finished'
[2025-06-04 20:35:41] 2025-06-04 18:35:21,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,308 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:35:41] 2025-06-04 18:35:21,308 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678247065/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,308 | INFO     | extracted standard info from prmon json
[2025-06-04 20:35:41] 2025-06-04 18:35:21,308 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:35:41] 2025-06-04 18:35:21,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:35:41] 2025-06-04 18:35:21,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:35:41] 2025-06-04 18:35:21,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:35:41] 2025-06-04 18:35:21,310 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:35:41] 2025-06-04 18:35:21,310 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | sum of deviations: -10729805693.999996
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | mean x: 1749060185.0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | mean y: 2773556.0169491526
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | -- intersect: 294775251058.8232
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | intersect: 294775251058.8232
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | chi2: 0.09389960976375483
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | -- intersect: 294775251058.8232
[2025-06-04 20:35:41] 2025-06-04 18:35:21,311 | INFO     | current memory leak: -168.53 B/s (using 59 data points, chi2=0.09)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | ..............................
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . Timing measurements:
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . get job = 0 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . initial setup = 1 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . payload setup = 7 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . stage-in = 0 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . payload execution = 4001 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . stage-out = 0 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | . log creation = 0 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,312 | INFO     | ..............................
[2025-06-04 20:35:41] 2025-06-04 18:35:21,530 | INFO     | 
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | job summary report
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | --------------------------------------------------
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | PanDA job id: 6678247065
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | task id: 45006595
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | errors: (none)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | pilot state: finished 
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | transexitcode: 0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | exeerrorcode: 0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | exeerrordiag: 
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | exitcode: 0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | exitmsg: OK
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | cpuconsumptiontime: 28468 s
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | nevents: 400
[2025-06-04 20:35:41] 2025-06-04 18:35:21,531 | INFO     | neventsw: 0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | pid: 2454474
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | pgrp: 2454474
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | corecount: 8
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | event service: False
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 4012: 2423421, 4013: 2432362, 4015: 2432418, 4021: 2432716}
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | --------------------------------------------------
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | 
[2025-06-04 20:35:41] 2025-06-04 18:35:21,532 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 20:35:41] 2025-06-04 18:35:21,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,547 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:35:41] 2025-06-04 18:35:21,547 | INFO     | job 6678247065 has completed (purged errors)
[2025-06-04 20:35:41] 2025-06-04 18:35:21,547 | INFO     | overall cleanup function is called
[2025-06-04 20:35:41] 2025-06-04 18:35:22,554 | INFO     | --- collectZombieJob: --- 10, [2454474]
[2025-06-04 20:35:41] 2025-06-04 18:35:22,554 | INFO     | zombie collector waiting for pid 2454474
[2025-06-04 20:35:41] 2025-06-04 18:35:22,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:35:41] 2025-06-04 18:35:22,555 | INFO     | collected zombie processes
[2025-06-04 20:35:41] 2025-06-04 18:35:22,555 | INFO     | will attempt to kill all subprocesses of pid=2454474
[2025-06-04 20:35:41] 2025-06-04 18:35:22,627 | INFO     | process IDs to be killed: [2454474] (in reverse order)
[2025-06-04 20:35:41] 2025-06-04 18:35:22,655 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:35:41] 2025-06-04 18:35:22,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:35:41] 2025-06-04 18:35:22,657 | INFO     | did not find any defunct processes belonging to 2454474
[2025-06-04 20:35:41] 2025-06-04 18:35:22,658 | INFO     | did not find any defunct processes belonging to 2454474
[2025-06-04 20:35:41] 2025-06-04 18:35:22,659 | INFO     | ready for new job
[2025-06-04 20:35:41] 2025-06-04 18:35:22,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | **************************************
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | **************************************
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | 
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | pilot is running in a VM
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | architecture information:
[2025-06-04 20:35:41] 2025-06-04 18:35:22,660 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:35:41] 2025-06-04 18:35:22,669 | INFO     | cat /etc/os-release:
[2025-06-04 20:35:41] NAME="CentOS Linux"
[2025-06-04 20:35:41] VERSION="7 (Core)"
[2025-06-04 20:35:41] ID="centos"
[2025-06-04 20:35:41] ID_LIKE="rhel fedora"
[2025-06-04 20:35:41] VERSION_ID="7"
[2025-06-04 20:35:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:35:41] ANSI_COLOR="0;31"
[2025-06-04 20:35:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:35:41] HOME_URL="https://www.centos.org/"
[2025-06-04 20:35:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:35:41] 
[2025-06-04 20:35:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:35:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:35:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:35:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:35:41] 
[2025-06-04 20:35:41] 2025-06-04 18:35:22,669 | INFO     | **************************************
[2025-06-04 20:35:41] 2025-06-04 18:35:23,172 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 20:35:41] 2025-06-04 18:35:23,183 | INFO     | sufficient remaining disk space (41917874176 B)
[2025-06-04 20:35:41] 2025-06-04 18:35:23,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:35:41] 2025-06-04 18:35:23,183 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:35:41] 2025-06-04 18:35:23,183 | INFO     | update_server=False
[2025-06-04 20:35:41] 2025-06-04 18:35:23,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:35:41] 2025-06-04 18:35:23,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:35:41] 2025-06-04 18:35:23,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:35:41] 2025-06-04 18:35:23,184 | INFO     | aborting loop
[2025-06-04 20:35:41] 2025-06-04 18:35:23,184 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:35:41] 2025-06-04 18:35:23,184 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:35:41] 2025-06-04 18:35:23,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:35:41] 2025-06-04 18:35:23,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:35:41] 2025-06-04 18:35:23,444 | INFO     | all payload control threads have been joined
[2025-06-04 20:35:41] 2025-06-04 18:35:23,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:35:41] 2025-06-04 18:35:23,745 | INFO     | all data control threads have been joined
[2025-06-04 20:35:41] 2025-06-04 18:35:24,189 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,189 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,189 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,198 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,313 | INFO     | [job] validate thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,317 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,331 | INFO     | all job control threads have been joined
[2025-06-04 20:35:41] 2025-06-04 18:35:24,445 | INFO     | [payload] control thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,707 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:24,750 | INFO     | [data] control thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:25,033 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:25,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:35:41] 2025-06-04 18:35:25,337 | INFO     | [job] control thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:25,337 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:25,461 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:25,572 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:29,322 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:33,672 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:35:41] 2025-06-04 18:35:34,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:35:41] 2025-06-04 18:35:35,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053334374208)>', '<ExcThread(monitor, started 140052726257408)>']
[2025-06-04 20:35:41] 2025-06-04 18:35:36,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:35:41] 2025-06-04 18:35:36,250 | INFO     | [monitor] control thread has ended
[2025-06-04 20:35:41] 2025-06-04 18:35:40,783 | INFO     | all workflow threads have been joined
[2025-06-04 20:35:41] 2025-06-04 18:35:40,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:35:41] 2025-06-04 18:35:40,783 | INFO     | traces error code: 0
[2025-06-04 20:35:41] 2025-06-04 18:35:40,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:35:41] 2025-06-04 18:35:40,868 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:35:41] 2025-06-04 18:35:40,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:35:41] 2025-06-04 18:35:40,873 [wrapper] pilotpid: 2448040
[2025-06-04 20:35:41] 2025-06-04 18:35:40,875 [wrapper] Pilot exit status: 0
[2025-06-04 20:35:41] 2025-06-04 18:35:40,883 [wrapper] pandaids: 6678247065
[2025-06-04 20:35:41] 2025-06-04 18:35:40,908 [wrapper] cleanup supervisor_pilot 2466092 2448041
[2025-06-04 20:35:41] 2025-06-04 18:35:40,910 [wrapper] Test setup, not cleaning
[2025-06-04 20:35:41] 2025-06-04 18:35:40,912 [wrapper] apfmon messages muted
[2025-06-04 20:35:41] 2025-06-04 18:35:40,914 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:35:41] 2025-06-04 18:35:40,917 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:35:41]  *** Error codes and diagnostics ***
[2025-06-04 20:35:41]     "exeErrorCode": 0,
[2025-06-04 20:35:41]     "exeErrorDiag": "",
[2025-06-04 20:35:41]     "pilotErrorCode": 0,
[2025-06-04 20:35:41]     "pilotErrorDiag": "",
[2025-06-04 20:35:41]  *** Listing of results directory ***
[2025-06-04 20:35:41] total 389660
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-04 20:35:41] -rwx------. 1 boinc boinc     37140 Jun  4 04:13 runpilot2-wrapper.sh
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:13 queuedata.json
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc       100 Jun  4 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:35:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 19:27 run_atlas
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc       105 Jun  4 19:27 job.xml
[2025-06-04 20:35:41] drwxrwx--x. 2 boinc boinc        68 Jun  4 19:27 shared
[2025-06-04 20:35:41] -rw-r--r--. 2 boinc boinc    508878 Jun  4 19:27 input.tar.gz
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc      6076 Jun  4 19:27 init_data.xml
[2025-06-04 20:35:41] -rw-r--r--. 2 boinc boinc 217502106 Jun  4 19:27 EVNT.45006593._002020.pool.root.1
[2025-06-04 20:35:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:27 start_atlas.sh
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc         0 Jun  4 19:27 boinc_lockfile
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc      2525 Jun  4 19:27 pandaJob.out
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc    990984 Jun  4 19:28 agis_schedconf.cvmfs.json
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc   1598969 Jun  4 19:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:35:41] drwx------. 4 boinc boinc      4096 Jun  4 19:28 pilot3
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc 176288768 Jun  4 20:34 HITS.45006595._050393.pool.root.1
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc        95 Jun  4 20:34 pilot_heartbeat.json
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc       530 Jun  4 20:34 boinc_task_state.xml
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc      1034 Jun  4 20:35 memory_monitor_summary.json
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc    306639 Jun  4 20:35 log.45006595._050393.job.log.tgz.1
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc      7734 Jun  4 20:35 heartbeat.json
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc        27 Jun  4 20:35 wrapper_checkpoint.txt
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:35 boinc_mmap_file
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc      4610 Jun  4 20:35 pilotlog.txt
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc    395125 Jun  4 20:35 log.45006595._050393.job.log.1
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc       357 Jun  4 20:35 output.list
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:35 runtime_log
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc    716800 Jun  4 20:35 result.tar.gz
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc      8662 Jun  4 20:35 runtime_log.err
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc       663 Jun  4 20:35 qQnNDmWosg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRqmKDmrx5ERo.diag
[2025-06-04 20:35:41] -rw-r--r--. 1 boinc boinc     21894 Jun  4 20:35 stderr.txt
[2025-06-04 20:35:41] HITS file was successfully produced:
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc 176288768 Jun  4 20:34 shared/HITS.pool.root.1
[2025-06-04 20:35:41]  *** Contents of shared directory: ***
[2025-06-04 20:35:41] total 385784
[2025-06-04 20:35:41] -rw-r--r--. 2 boinc boinc    508878 Jun  4 19:27 input.tar.gz
[2025-06-04 20:35:41] -rw-r--r--. 2 boinc boinc 217502106 Jun  4 19:27 ATLAS.root_0
[2025-06-04 20:35:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:27 start_atlas.sh
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc 176288768 Jun  4 20:34 HITS.pool.root.1
[2025-06-04 20:35:41] -rw-------. 1 boinc boinc    716800 Jun  4 20:35 result.tar.gz
20:35:42 (2444408): run_atlas exited; CPU time 28492.810404
20:35:42 (2444408): called boinc_finish(0)

</stderr_txt>
]]>

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