Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:58:57 (4140768): wrapper (7.7.26015): starting
02:58:57 (4140768): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 02:58:57] Arguments: --nthreads 10
[2025-06-04 02:58:57] Threads: 10
[2025-06-04 02:58:57] Checking for CVMFS
[2025-06-04 02:58:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:58:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:58:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:58:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:58:58] 2.12.6.0 9377 1007 130120 146771 1 119 25160657 32935937 10559 16776704 0 5719015 99.728 3484906 34409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 02:58:58] CVMFS is ok
[2025-06-04 02:58:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:58:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:58:58] Further information can be found at the LHC@home message board.
[2025-06-04 02:58:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:58:58] Checking for apptainer binary...
[2025-06-04 02:58:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:58:58] Running /usr/bin/apptainer --version
[2025-06-04 02:58:58] apptainer version 1.4.1-1.el9
[2025-06-04 02:58:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:58:58] c-8-15.aglt2.org
[2025-06-04 02:58:58] apptainer works
[2025-06-04 02:58:58] Set ATHENA_PROC_NUMBER=10
[2025-06-04 02:58:58] Set ATHENA_CORE_NUMBER=10
[2025-06-04 02:58:58] Starting ATLAS job with PandaID=6677420906
[2025-06-04 02:58:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:19:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:19:53]  lfn=log.45006595._014897.job.log.tgz.1
[2025-06-04 04:19:53]  mtime=0
[2025-06-04 04:19:53]  protocol_id=None
[2025-06-04 04:19:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:19:53]  replicas=None
[2025-06-04 04:19:53]  scope=mc23_13p6TeV
[2025-06-04 04:19:53]  status=None
[2025-06-04 04:19:53]  status_code=0
[2025-06-04 04:19:53]  storage_token=
[2025-06-04 04:19:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677420906/log.45006595._014897.job.log.tgz.1
[2025-06-04 04:19:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/fd/log.45006595._014897.job.log.tgz.1
[2025-06-04 04:19:53]  workdir=None
[2025-06-04 04:19:53] ]
[2025-06-04 04:19:53] 2025-06-04 08:19:29,074 | INFO     | transferring file log.45006595._014897.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677420906/log.45006595._014897.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 04:19:53] 2025-06-04 08:19:29,074 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677420906/log.45006595._014897.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._014897.job
[2025-06-04 04:19:53] 2025-06-04 08:19:29,094 | INFO     | adding to output.list: log.45006595._014897.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/fd/log.45006595._014897.job.log.tg
[2025-06-04 04:19:53] 2025-06-04 08:19:29,095 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:19:53] 2025-06-04 08:19:29,095 | INFO     | summary of transferred files:
[2025-06-04 04:19:53] 2025-06-04 08:19:29,096 | INFO     |  -- lfn=log.45006595._014897.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:19:53] 2025-06-04 08:19:29,096 | INFO     | stage-out finished correctly
[2025-06-04 04:19:53] 2025-06-04 08:19:29,631 | INFO     | PID=4144379 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 04:19:53] 2025-06-04 08:19:29,631 | INFO     | .. there are 19 such processes running
[2025-06-04 04:19:53] 2025-06-04 08:19:30,505 | WARNING  | process 4153358 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 04:19:53] 2025-06-04 08:19:30,505 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677420906/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:19:53] 2025-06-04 08:19:30,849 | INFO     | number of running child processes to parent process 4153358: 1
[2025-06-04 04:19:53] 2025-06-04 08:19:30,849 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:19:53] 2025-06-04 08:19:32,378 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:19:53] 2025-06-04 08:19:33,214 | INFO     | job 6677420906 has state=finished
[2025-06-04 04:19:53] 2025-06-04 08:19:33,215 | INFO     | preparing for final server update for job 6677420906 in state='finished'
[2025-06-04 04:19:53] 2025-06-04 08:19:33,216 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:19:53] 2025-06-04 08:19:33,216 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:19:53] 2025-06-04 08:19:33,216 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:19:53] 2025-06-04 08:19:33,217 | INFO     | job 6677420906 has finished - writing final server update
[2025-06-04 04:19:53] 2025-06-04 08:19:33,217 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:19:53] 2025-06-04 08:19:33,233 | INFO     | executing command: lscpu
[2025-06-04 04:19:53] 2025-06-04 08:19:33,302 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:19:53] 2025-06-04 08:19:33,353 | INFO     | monitor loop #356: job 0:6677420906 is in state 'finished'
[2025-06-04 04:19:53] 2025-06-04 08:19:33,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:19:53] 2025-06-04 08:19:35,855 | INFO     | monitor loop #357: job 0:6677420906 is in state 'finished'
[2025-06-04 04:19:53] 2025-06-04 08:19:35,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:19:53] 2025-06-04 08:19:37,509 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 04:19:53] 2025-06-04 08:19:37,509 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677420906/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:19:53] 2025-06-04 08:19:37,510 | INFO     | extracted standard info from prmon json
[2025-06-04 04:19:53] 2025-06-04 08:19:37,511 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:19:53] 2025-06-04 08:19:37,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:19:53] 2025-06-04 08:19:37,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:19:53] 2025-06-04 08:19:37,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:19:53] 2025-06-04 08:19:37,514 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:19:53] 2025-06-04 08:19:37,515 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 04:19:53] 2025-06-04 08:19:37,515 | INFO     | sum of deviations: 6606995399.999999
[2025-06-04 04:19:53] 2025-06-04 08:19:37,515 | INFO     | mean x: 1749022847.5
[2025-06-04 04:19:53] 2025-06-04 08:19:37,515 | INFO     | mean y: 2274772.277777778
[2025-06-04 04:19:53] 2025-06-04 08:19:37,515 | INFO     | -- intersect: -99861357407.27913
[2025-06-04 04:19:53] 2025-06-04 08:19:37,515 | INFO     | intersect: -99861357407.27913
[2025-06-04 04:19:53] 2025-06-04 08:19:37,516 | INFO     | chi2: 0.758930813515799
[2025-06-04 04:19:53] 2025-06-04 08:19:37,516 | INFO     | -- intersect: -99861357407.27913
[2025-06-04 04:19:53] 2025-06-04 08:19:37,516 | INFO     | current memory leak: 57.10 B/s (using 72 data points, chi2=0.76)
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | ..............................
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . Timing measurements:
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . get job = 0 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . initial setup = 2 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . payload setup = 6 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . stage-in = 0 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . payload execution = 4791 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . stage-out = 0 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,517 | INFO     | . log creation = 0 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,518 | INFO     | ..............................
[2025-06-04 04:19:53] 2025-06-04 08:19:37,627 | INFO     | 
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | job summary report
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | --------------------------------------------------
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | PanDA job id: 6677420906
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | task id: 45006595
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | errors: (none)
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:19:53] 2025-06-04 08:19:37,628 | INFO     | pilot state: finished 
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | transexitcode: 0
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | exeerrorcode: 0
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | exeerrordiag: 
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | exitcode: 0
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | exitmsg: OK
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | cpuconsumptiontime: 39567 s
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | nevents: 400
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | neventsw: 0
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | pid: 4153358
[2025-06-04 04:19:53] 2025-06-04 08:19:37,629 | INFO     | pgrp: 4153358
[2025-06-04 04:19:53] 2025-06-04 08:19:37,630 | INFO     | corecount: 10
[2025-06-04 04:19:53] 2025-06-04 08:19:37,630 | INFO     | event service: False
[2025-06-04 04:19:53] 2025-06-04 08:19:37,630 | INFO     | sizes: {0: 2405182, 1: 2405182, 5: 2405416, 11: 2405472, 4802: 2431470, 4804: 2440411, 4807: 2440595, 4812: 2440765}
[2025-06-04 04:19:53] 2025-06-04 08:19:37,630 | INFO     | --------------------------------------------------
[2025-06-04 04:19:53] 2025-06-04 08:19:37,630 | INFO     | 
[2025-06-04 04:19:53] 2025-06-04 08:19:37,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 04:19:53] 2025-06-04 08:19:37,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,654 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:19:53] 2025-06-04 08:19:37,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,654 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:19:53] 2025-06-04 08:19:37,654 | INFO     | job 6677420906 has completed (purged errors)
[2025-06-04 04:19:53] 2025-06-04 08:19:37,654 | INFO     | overall cleanup function is called
[2025-06-04 04:19:53] 2025-06-04 08:19:38,660 | INFO     | --- collectZombieJob: --- 10, [4153358]
[2025-06-04 04:19:53] 2025-06-04 08:19:38,661 | INFO     | zombie collector waiting for pid 4153358
[2025-06-04 04:19:53] 2025-06-04 08:19:38,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:19:53] 2025-06-04 08:19:38,661 | INFO     | collected zombie processes
[2025-06-04 04:19:53] 2025-06-04 08:19:38,661 | INFO     | will attempt to kill all subprocesses of pid=4153358
[2025-06-04 04:19:53] 2025-06-04 08:19:39,010 | INFO     | process IDs to be killed: [4153358] (in reverse order)
[2025-06-04 04:19:53] 2025-06-04 08:19:39,106 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:19:53] 2025-06-04 08:19:39,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:19:53] 2025-06-04 08:19:39,118 | INFO     | did not find any defunct processes belonging to 4153358
[2025-06-04 04:19:53] 2025-06-04 08:19:39,129 | INFO     | did not find any defunct processes belonging to 4153358
[2025-06-04 04:19:53] 2025-06-04 08:19:39,130 | INFO     | ready for new job
[2025-06-04 04:19:53] 2025-06-04 08:19:39,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:19:53] 2025-06-04 08:19:39,133 | INFO     | **************************************
[2025-06-04 04:19:53] 2025-06-04 08:19:39,133 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:19:53] 2025-06-04 08:19:39,133 | INFO     | **************************************
[2025-06-04 04:19:53] 2025-06-04 08:19:39,133 | INFO     | 
[2025-06-04 04:19:53] 2025-06-04 08:19:39,149 | INFO     | architecture information:
[2025-06-04 04:19:53] 2025-06-04 08:19:39,150 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:19:53] 2025-06-04 08:19:39,165 | INFO     | cat /etc/os-release:
[2025-06-04 04:19:53] NAME="CentOS Linux"
[2025-06-04 04:19:53] VERSION="7 (Core)"
[2025-06-04 04:19:53] ID="centos"
[2025-06-04 04:19:53] ID_LIKE="rhel fedora"
[2025-06-04 04:19:53] VERSION_ID="7"
[2025-06-04 04:19:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:19:53] ANSI_COLOR="0;31"
[2025-06-04 04:19:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:19:53] HOME_URL="https://www.centos.org/"
[2025-06-04 04:19:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:19:53] 
[2025-06-04 04:19:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:19:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:19:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:19:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:19:53] 
[2025-06-04 04:19:53] 2025-06-04 08:19:39,166 | INFO     | **************************************
[2025-06-04 04:19:53] 2025-06-04 08:19:39,669 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 04:19:53] 2025-06-04 08:19:39,687 | INFO     | sufficient remaining disk space (76596379648 B)
[2025-06-04 04:19:53] 2025-06-04 08:19:39,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:19:53] 2025-06-04 08:19:39,687 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:19:53] 2025-06-04 08:19:39,687 | INFO     | update_server=False
[2025-06-04 04:19:53] 2025-06-04 08:19:39,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:19:53] 2025-06-04 08:19:39,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:19:53] 2025-06-04 08:19:39,688 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:19:53] 2025-06-04 08:19:39,689 | INFO     | aborting loop
[2025-06-04 04:19:53] 2025-06-04 08:19:39,689 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:19:53] 2025-06-04 08:19:39,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:19:53] 2025-06-04 08:19:39,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:19:53] 2025-06-04 08:19:39,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:19:53] 2025-06-04 08:19:39,794 | INFO     | all job control threads have been joined
[2025-06-04 04:19:53] 2025-06-04 08:19:40,104 | INFO     | all data control threads have been joined
[2025-06-04 04:19:53] 2025-06-04 08:19:40,693 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:40,694 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:40,800 | INFO     | [job] control thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:40,846 | INFO     | [job] validate thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:40,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,009 | INFO     | all payload control threads have been joined
[2025-06-04 04:19:53] 2025-06-04 08:19:41,102 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,109 | INFO     | [data] control thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,150 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,401 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,408 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,412 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,725 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:41,921 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:42,014 | INFO     | [payload] control thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:42,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:19:53] 2025-06-04 08:19:42,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:19:53] 2025-06-04 08:19:43,643 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:47,005 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:19:53] 2025-06-04 08:19:47,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624098473792)>', '<ExcThread(monitor, started 140623824787200)>']
[2025-06-04 04:19:53] 2025-06-04 08:19:47,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:19:53] 2025-06-04 08:19:47,725 | INFO     | [monitor] control thread has ended
[2025-06-04 04:19:53] 2025-06-04 08:19:52,679 | INFO     | all workflow threads have been joined
[2025-06-04 04:19:53] 2025-06-04 08:19:52,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:19:53] 2025-06-04 08:19:52,681 | INFO     | traces error code: 0
[2025-06-04 04:19:53] 2025-06-04 08:19:52,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:19:53] 2025-06-04 08:19:52,869 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:19:53] 2025-06-04 08:19:52,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:19:53] 2025-06-04 08:19:52,873 [wrapper] pilotpid: 4144379
[2025-06-04 04:19:53] 2025-06-04 08:19:52,875 [wrapper] Pilot exit status: 0
[2025-06-04 04:19:53] 2025-06-04 08:19:52,885 [wrapper] pandaids: 6677420906
[2025-06-04 04:19:53] 2025-06-04 08:19:52,957 [wrapper] cleanup supervisor_pilot  320686 4144380
[2025-06-04 04:19:53] 2025-06-04 08:19:52,961 [wrapper] Test setup, not cleaning
[2025-06-04 04:19:53] 2025-06-04 08:19:52,964 [wrapper] apfmon messages muted
[2025-06-04 04:19:53] 2025-06-04 08:19:52,967 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:19:53] 2025-06-04 08:19:52,969 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:19:53]  *** Error codes and diagnostics ***
[2025-06-04 04:19:53]     "exeErrorCode": 0,
[2025-06-04 04:19:53]     "exeErrorDiag": "",
[2025-06-04 04:19:53]     "pilotErrorCode": 0,
[2025-06-04 04:19:53]     "pilotErrorDiag": "",
[2025-06-04 04:19:53]  *** Listing of results directory ***
[2025-06-04 04:19:53] total 390704
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 19:50 pilot3.tar.gz
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 20:15 queuedata.json
[2025-06-04 04:19:53] -rwx------. 1 boincer umatlas     37140 Jun  2 20:15 runpilot2-wrapper.sh
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas       100 Jun  4 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:19:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 02:58 run_atlas
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas       105 Jun  4 02:58 job.xml
[2025-06-04 04:19:53] -rw-r--r--. 2 boincer umatlas 214120409 Jun  4 02:58 EVNT.45006593._000596.pool.root.1
[2025-06-04 04:19:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 02:58 shared
[2025-06-04 04:19:53] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 02:58 input.tar.gz
[2025-06-04 04:19:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:58 start_atlas.sh
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas         0 Jun  4 02:58 boinc_lockfile
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 02:58 pandaJob.out
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas    986745 Jun  4 02:59 agis_schedconf.cvmfs.json
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas   1603667 Jun  4 02:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:19:53] drwx------. 4 boincer umatlas      4096 Jun  4 02:59 pilot3
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas      6658 Jun  4 04:09 init_data.xml
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas 180487084 Jun  4 04:18 HITS.45006595._014897.pool.root.1
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas       529 Jun  4 04:18 boinc_task_state.xml
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas        95 Jun  4 04:18 pilot_heartbeat.json
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 04:19 boinc_mmap_file
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas        27 Jun  4 04:19 wrapper_checkpoint.txt
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas      1038 Jun  4 04:19 memory_monitor_summary.json
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas    346038 Jun  4 04:19 log.45006595._014897.job.log.tgz.1
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas      7713 Jun  4 04:19 heartbeat.json
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas      4476 Jun  4 04:19 pilotlog.txt
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas    475005 Jun  4 04:19 log.45006595._014897.job.log.1
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas       357 Jun  4 04:19 output.list
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas       620 Jun  4 04:19 runtime_log
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas    839680 Jun  4 04:19 result.tar.gz
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 04:19 runtime_log.err
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas       652 Jun  4 04:19 lFfNDmpUUg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaEhKDmABia9m.diag
[2025-06-04 04:19:53] -rw-r--r--. 1 boincer umatlas     21711 Jun  4 04:19 stderr.txt
[2025-06-04 04:19:53] HITS file was successfully produced:
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas 180487084 Jun  4 04:18 shared/HITS.pool.root.1
[2025-06-04 04:19:53]  *** Contents of shared directory: ***
[2025-06-04 04:19:53] total 386704
[2025-06-04 04:19:53] -rw-r--r--. 2 boincer umatlas 214120409 Jun  4 02:58 ATLAS.root_0
[2025-06-04 04:19:53] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 02:58 input.tar.gz
[2025-06-04 04:19:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:58 start_atlas.sh
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas 180487084 Jun  4 04:18 HITS.pool.root.1
[2025-06-04 04:19:53] -rw-------. 1 boincer umatlas    839680 Jun  4 04:19 result.tar.gz
04:19:54 (4140768): run_atlas exited; CPU time 39636.073970
04:19:54 (4140768): called boinc_finish(0)

</stderr_txt>
]]>

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