Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:56:05 (1792029): wrapper (7.7.26015): starting
02:56:05 (1792029): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 02:56:05] Arguments: --nthreads 12
[2025-06-04 02:56:05] Threads: 12
[2025-06-04 02:56:05] Checking for CVMFS
[2025-06-04 02:56:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:56:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:56:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:56:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:56:07] 2.12.6.0 4996 418 85868 146771 1 391 26960439 32935937 14073 16776704 0 1441212 99.329 2671833 31569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 02:56:07] CVMFS is ok
[2025-06-04 02:56:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:56:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:56:07] Further information can be found at the LHC@home message board.
[2025-06-04 02:56:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:56:07] Checking for apptainer binary...
[2025-06-04 02:56:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:56:07] Running /usr/bin/apptainer --version
[2025-06-04 02:56:07] apptainer version 1.4.0-1.el9
[2025-06-04 02:56:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:56:07] c6-5-7-3.aglt2.org
[2025-06-04 02:56:07] apptainer works
[2025-06-04 02:56:07] Set ATHENA_PROC_NUMBER=12
[2025-06-04 02:56:07] Set ATHENA_CORE_NUMBER=12
[2025-06-04 02:56:08] Starting ATLAS job with PandaID=6678156079
[2025-06-04 02:56:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:16:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:16:01] 2025-06-04 09:15:39,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:16:01] 2025-06-04 09:15:39,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:16:01] 2025-06-04 09:15:39,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:16:01] 2025-06-04 09:15:39,574 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:16:01] 2025-06-04 09:15:39,575 | INFO     | sum of square deviations: 780081506.9926479
[2025-06-04 05:16:01] 2025-06-04 09:15:39,575 | INFO     | sum of deviations: 38123902380.963234
[2025-06-04 05:16:01] 2025-06-04 09:15:39,575 | INFO     | mean x: 1749024387.7573528
[2025-06-04 05:16:01] 2025-06-04 09:15:39,575 | INFO     | mean y: 2289797.786764706
[2025-06-04 05:16:01] 2025-06-04 09:15:39,576 | INFO     | -- intersect: -85475489668.93472
[2025-06-04 05:16:01] 2025-06-04 09:15:39,576 | INFO     | intersect: -85475489668.93472
[2025-06-04 05:16:01] 2025-06-04 09:15:39,576 | INFO     | chi2: 4.326055653848183
[2025-06-04 05:16:01] 2025-06-04 09:15:39,576 | INFO     | sum of square deviations: 697180249.1755753
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | sum of deviations: 44994192169.67173
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | mean x: 1749024235.259542
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | mean y: 2301993.86259542
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | -- intersect: -112875153504.53963
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | intersect: -112875153504.53963
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | chi2: 3.6581565598935297
[2025-06-04 05:16:01] 2025-06-04 09:15:39,582 | INFO     | current chi2=3.6581565598935297 (change=15.438985241915065 %)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,583 | INFO     | right removable region: 130
[2025-06-04 05:16:01] 2025-06-04 09:15:39,583 | INFO     | sum of square deviations: 697166951.6488537
[2025-06-04 05:16:01] 2025-06-04 09:15:39,584 | INFO     | sum of deviations: 7425424148.526716
[2025-06-04 05:16:01] 2025-06-04 09:15:39,584 | INFO     | mean x: 1749024540.2671757
[2025-06-04 05:16:01] 2025-06-04 09:15:39,584 | INFO     | mean y: 2345970.099236641
[2025-06-04 05:16:01] 2025-06-04 09:15:39,584 | INFO     | -- intersect: -18626260889.347954
[2025-06-04 05:16:01] 2025-06-04 09:15:39,584 | INFO     | intersect: -18626260889.347954
[2025-06-04 05:16:01] 2025-06-04 09:15:39,584 | INFO     | chi2: 1.8424822449592557
[2025-06-04 05:16:01] 2025-06-04 09:15:39,585 | INFO     | current chi2=1.8424822449592557 (change=57.409649981726396 %)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,585 | INFO     | sum of square deviations: 620345533.7777768
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | sum of deviations: -11112282939.88889
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | mean x: 1749024692.7777777
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | mean y: 2382739.1825396824
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | -- intersect: 31332756211.26953
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | intersect: 31332756211.26953
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | chi2: 0.9825371098419844
[2025-06-04 05:16:01] 2025-06-04 09:15:39,586 | INFO     | current chi2=0.9825371098419844 (change=46.67318436690216 %)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,587 | INFO     | sum of square deviations: 549384690.8760316
[2025-06-04 05:16:01] 2025-06-04 09:15:39,587 | INFO     | sum of deviations: -13757397808.694214
[2025-06-04 05:16:01] 2025-06-04 09:15:39,587 | INFO     | mean x: 1749024845.289256
[2025-06-04 05:16:01] 2025-06-04 09:15:39,587 | INFO     | mean y: 2388081.619834711
[2025-06-04 05:16:01] 2025-06-04 09:15:39,588 | INFO     | -- intersect: 43800533486.00958
[2025-06-04 05:16:01] 2025-06-04 09:15:39,588 | INFO     | intersect: 43800533486.00958
[2025-06-04 05:16:01] 2025-06-04 09:15:39,588 | INFO     | chi2: 0.8236703385489214
[2025-06-04 05:16:01] 2025-06-04 09:15:39,588 | INFO     | current chi2=0.8236703385489214 (change=16.169035215230966 %)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,588 | INFO     | left removable region: 30
[2025-06-04 05:16:01] 2025-06-04 09:15:39,588 | INFO     | sum of square deviations: 310117860.75999916
[2025-06-04 05:16:01] 2025-06-04 09:15:39,589 | INFO     | sum of deviations: -38417229.16000007
[2025-06-04 05:16:01] 2025-06-04 09:15:39,589 | INFO     | mean x: 1749025119.82
[2025-06-04 05:16:01] 2025-06-04 09:15:39,589 | INFO     | mean y: 2391905.38
[2025-06-04 05:16:01] 2025-06-04 09:15:39,589 | INFO     | -- intersect: 219060170.37465018
[2025-06-04 05:16:01] 2025-06-04 09:15:39,589 | INFO     | intersect: 219060170.37465018
[2025-06-04 05:16:01] 2025-06-04 09:15:39,590 | INFO     | chi2: 0.015265689141558346
[2025-06-04 05:16:01] 2025-06-04 09:15:39,590 | INFO     | -- intersect: 219060170.37465018
[2025-06-04 05:16:01] 2025-06-04 09:15:39,590 | INFO     | current memory leak: -0.12 B/s (using 100 data points, chi2=0.02)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | ..............................
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . Timing measurements:
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . get job = 0 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . initial setup = 4 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . payload setup = 21 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . stage-in = 0 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . payload execution = 8270 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . stage-out = 1 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | . log creation = 0 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,595 | INFO     | ..............................
[2025-06-04 05:16:01] 2025-06-04 09:15:39,850 | INFO     | 
[2025-06-04 05:16:01] 2025-06-04 09:15:39,850 | INFO     | job summary report
[2025-06-04 05:16:01] 2025-06-04 09:15:39,850 | INFO     | --------------------------------------------------
[2025-06-04 05:16:01] 2025-06-04 09:15:39,850 | INFO     | PanDA job id: 6678156079
[2025-06-04 05:16:01] 2025-06-04 09:15:39,850 | INFO     | task id: 45006595
[2025-06-04 05:16:01] 2025-06-04 09:15:39,850 | INFO     | errors: (none)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | pilot state: finished 
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | transexitcode: 0
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | exeerrorcode: 0
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | exeerrordiag: 
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | exitcode: 0
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | exitmsg: OK
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | cpuconsumptiontime: 36592 s
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | nevents: 400
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | neventsw: 0
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | pid: 1802889
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | pgrp: 1802889
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | corecount: 12
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | event service: False
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 16: 2405446, 22: 2405474, 8296: 2433185, 8299: 2442182, 8310: 2442296}
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | --------------------------------------------------
[2025-06-04 05:16:01] 2025-06-04 09:15:39,851 | INFO     | 
[2025-06-04 05:16:01] 2025-06-04 09:15:39,852 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:16:01] 2025-06-04 09:15:39,877 | INFO     | PID=1795663 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 05:16:01] 2025-06-04 09:15:39,877 | INFO     | .. there are 15 such processes running
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | job 6678156079 has completed (purged errors)
[2025-06-04 05:16:01] 2025-06-04 09:15:39,918 | INFO     | overall cleanup function is called
[2025-06-04 05:16:01] 2025-06-04 09:15:40,935 | INFO     | --- collectZombieJob: --- 10, [1802889]
[2025-06-04 05:16:01] 2025-06-04 09:15:40,936 | INFO     | zombie collector waiting for pid 1802889
[2025-06-04 05:16:01] 2025-06-04 09:15:40,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:16:01] 2025-06-04 09:15:40,936 | INFO     | collected zombie processes
[2025-06-04 05:16:01] 2025-06-04 09:15:40,936 | INFO     | will attempt to kill all subprocesses of pid=1802889
[2025-06-04 05:16:01] 2025-06-04 09:15:41,468 | INFO     | process IDs to be killed: [1802889] (in reverse order)
[2025-06-04 05:16:01] 2025-06-04 09:15:41,556 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:16:01] 2025-06-04 09:15:41,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:16:01] 2025-06-04 09:15:41,574 | INFO     | did not find any defunct processes belonging to 1802889
[2025-06-04 05:16:01] 2025-06-04 09:15:41,590 | INFO     | did not find any defunct processes belonging to 1802889
[2025-06-04 05:16:01] 2025-06-04 09:15:41,591 | INFO     | ready for new job
[2025-06-04 05:16:01] 2025-06-04 09:15:41,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:16:01] 2025-06-04 09:15:41,593 | INFO     | **************************************
[2025-06-04 05:16:01] 2025-06-04 09:15:41,593 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:16:01] 2025-06-04 09:15:41,593 | INFO     | **************************************
[2025-06-04 05:16:01] 2025-06-04 09:15:41,593 | INFO     | 
[2025-06-04 05:16:01] 2025-06-04 09:15:41,614 | INFO     | architecture information:
[2025-06-04 05:16:01] 2025-06-04 09:15:41,621 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:16:01] 2025-06-04 09:15:41,654 | INFO     | cat /etc/os-release:
[2025-06-04 05:16:01] NAME="CentOS Linux"
[2025-06-04 05:16:01] VERSION="7 (Core)"
[2025-06-04 05:16:01] ID="centos"
[2025-06-04 05:16:01] ID_LIKE="rhel fedora"
[2025-06-04 05:16:01] VERSION_ID="7"
[2025-06-04 05:16:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:16:01] ANSI_COLOR="0;31"
[2025-06-04 05:16:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:16:01] HOME_URL="https://www.centos.org/"
[2025-06-04 05:16:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:16:01] 
[2025-06-04 05:16:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:16:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:16:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:16:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:16:01] 
[2025-06-04 05:16:01] 2025-06-04 09:15:41,655 | INFO     | **************************************
[2025-06-04 05:16:01] 2025-06-04 09:15:42,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:16:01] 2025-06-04 09:15:42,196 | INFO     | sufficient remaining disk space (76368838656 B)
[2025-06-04 05:16:01] 2025-06-04 09:15:42,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:16:01] 2025-06-04 09:15:42,197 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:16:01] 2025-06-04 09:15:42,197 | INFO     | update_server=False
[2025-06-04 05:16:01] 2025-06-04 09:15:42,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:16:01] 2025-06-04 09:15:42,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:16:01] 2025-06-04 09:15:42,198 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:16:01] 2025-06-04 09:15:42,198 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:16:01] 2025-06-04 09:15:42,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:16:01] 2025-06-04 09:15:42,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:16:01] 2025-06-04 09:15:42,715 | INFO     | all job control threads have been joined
[2025-06-04 05:16:01] 2025-06-04 09:15:42,805 | INFO     | all data control threads have been joined
[2025-06-04 05:16:01] 2025-06-04 09:15:42,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:16:01] 2025-06-04 09:15:42,996 | INFO     | aborting loop
[2025-06-04 05:16:01] 2025-06-04 09:15:43,204 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,212 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,304 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,413 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,418 | INFO     | all payload control threads have been joined
[2025-06-04 05:16:01] 2025-06-04 09:15:43,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:16:01] 2025-06-04 09:15:43,721 | INFO     | [job] control thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,807 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,813 | INFO     | [data] control thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:43,842 | INFO     | [job] validate thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:44,001 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:44,210 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:44,424 | INFO     | [payload] control thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:44,639 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:44,789 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:44,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:16:01] 2025-06-04 09:15:45,870 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:47,606 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:52,793 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:16:01] 2025-06-04 09:15:53,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:16:01] 2025-06-04 09:15:55,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040802375488)>', '<ExcThread(monitor, started 140040042682112)>']
[2025-06-04 05:16:01] 2025-06-04 09:15:56,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:16:01] 2025-06-04 09:15:56,282 | INFO     | [monitor] control thread has ended
[2025-06-04 05:16:01] 2025-06-04 09:16:00,715 | INFO     | all workflow threads have been joined
[2025-06-04 05:16:01] 2025-06-04 09:16:00,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:16:01] 2025-06-04 09:16:00,716 | INFO     | traces error code: 0
[2025-06-04 05:16:01] 2025-06-04 09:16:00,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:16:01] 2025-06-04 09:16:00,943 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:16:01] 2025-06-04 09:16:00,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:16:01] 2025-06-04 09:16:01,018 [wrapper] pilotpid: 1795663
[2025-06-04 05:16:01] 2025-06-04 09:16:01,038 [wrapper] Pilot exit status: 0
[2025-06-04 05:16:01] 2025-06-04 09:16:01,133 [wrapper] pandaids: 6678156079
[2025-06-04 05:16:01] 2025-06-04 09:16:01,258 [wrapper] cleanup supervisor_pilot 2237099 1795664
[2025-06-04 05:16:01] 2025-06-04 09:16:01,277 [wrapper] Test setup, not cleaning
[2025-06-04 05:16:01] 2025-06-04 09:16:01,295 [wrapper] apfmon messages muted
[2025-06-04 05:16:01] 2025-06-04 09:16:01,301 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:16:01] 2025-06-04 09:16:01,304 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:16:01]  *** Error codes and diagnostics ***
[2025-06-04 05:16:01]     "exeErrorCode": 0,
[2025-06-04 05:16:01]     "exeErrorDiag": "",
[2025-06-04 05:16:01]     "pilotErrorCode": 0,
[2025-06-04 05:16:01]     "pilotErrorDiag": "",
[2025-06-04 05:16:01]  *** Listing of results directory ***
[2025-06-04 05:16:01] total 393620
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:22 pilot3.tar.gz
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:34 queuedata.json
[2025-06-04 05:16:01] -rwx------. 1 boincer umatlas     37140 Jun  3 19:35 runpilot2-wrapper.sh
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas       100 Jun  4 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:16:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 02:56 run_atlas
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas       105 Jun  4 02:56 job.xml
[2025-06-04 05:16:01] -rw-r--r--. 2 boincer umatlas 214088532 Jun  4 02:56 EVNT.45006593._001930.pool.root.1
[2025-06-04 05:16:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:56 start_atlas.sh
[2025-06-04 05:16:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 02:56 shared
[2025-06-04 05:16:01] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 02:56 input.tar.gz
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas         0 Jun  4 02:56 boinc_lockfile
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 02:56 pandaJob.out
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas    986745 Jun  4 02:56 agis_schedconf.cvmfs.json
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas   1603667 Jun  4 02:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:16:01] drwx------. 4 boincer umatlas      4096 Jun  4 02:56 pilot3
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 05:12 init_data.xml
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas 182905657 Jun  4 05:14 HITS.45006595._048066.pool.root.1
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:14 boinc_task_state.xml
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas        95 Jun  4 05:15 pilot_heartbeat.json
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas      1040 Jun  4 05:15 memory_monitor_summary.json
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas    390941 Jun  4 05:15 log.45006595._048066.job.log.tgz.1
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas      7714 Jun  4 05:15 heartbeat.json
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:15 boinc_mmap_file
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:15 wrapper_checkpoint.txt
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas      4548 Jun  4 05:16 pilotlog.txt
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas    730089 Jun  4 05:16 log.45006595._048066.job.log.1
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas       357 Jun  4 05:16 output.list
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:16 runtime_log
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas   1136640 Jun  4 05:16 result.tar.gz
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas       653 Jun  4 05:16 SOBODmULqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVGaKDmsXjkCo.diag
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas      8661 Jun  4 05:16 runtime_log.err
[2025-06-04 05:16:01] -rw-r--r--. 1 boincer umatlas     20732 Jun  4 05:16 stderr.txt
[2025-06-04 05:16:01] HITS file was successfully produced:
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas 182905657 Jun  4 05:14 shared/HITS.pool.root.1
[2025-06-04 05:16:01]  *** Contents of shared directory: ***
[2025-06-04 05:16:01] total 389324
[2025-06-04 05:16:01] -rw-r--r--. 2 boincer umatlas 214088532 Jun  4 02:56 ATLAS.root_0
[2025-06-04 05:16:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:56 start_atlas.sh
[2025-06-04 05:16:01] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 02:56 input.tar.gz
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas 182905657 Jun  4 05:14 HITS.pool.root.1
[2025-06-04 05:16:01] -rw-------. 1 boincer umatlas   1136640 Jun  4 05:16 result.tar.gz
05:16:03 (1792029): run_atlas exited; CPU time 36794.600053
05:16:03 (1792029): called boinc_finish(0)

</stderr_txt>
]]>

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