Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:45:30 (290432): wrapper (7.7.26015): starting
08:45:30 (290432): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:45:30] Arguments: --nthreads 12
[2025-06-04 08:45:30] Threads: 12
[2025-06-04 08:45:30] Checking for CVMFS
[2025-06-04 08:45:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:45:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:45:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:45:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:45:31] 2.12.7.0 29207 1686 75776 146773 3 187 3827829 4096000 13575 130560 17 22135192 99.999 396822 138 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 08:45:31] CVMFS is ok
[2025-06-04 08:45:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:45:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 08:45:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 08:45:31] Further information can be found at the LHC@home message board.
[2025-06-04 08:45:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:45:31] Checking for apptainer binary...
[2025-06-04 08:45:31] apptainer is not installed, using version from CVMFS
[2025-06-04 08:45:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:45:31] epyc7v12
[2025-06-04 08:45:31] apptainer works
[2025-06-04 08:45:31] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:45:31] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:45:31] Starting ATLAS job with PandaID=6678247785
[2025-06-04 08:45:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:27:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:27:25]  protocol_id=None
[2025-06-04 10:27:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:27:25]  replicas=None
[2025-06-04 10:27:25]  scope=mc23_13p6TeV
[2025-06-04 10:27:25]  status=None
[2025-06-04 10:27:25]  status_code=0
[2025-06-04 10:27:25]  storage_token=
[2025-06-04 10:27:25]  surl=/opt/boinc/instance_homes/boinc_31417/slots/16/PanDA_Pilot-6678247785/log.45006595._050462.job.log.tgz.1
[2025-06-04 10:27:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/c3/log.45006595._050462.job.log.tgz.1
[2025-06-04 10:27:25]  workdir=None
[2025-06-04 10:27:25] ]
[2025-06-04 10:27:25] 2025-06-04 10:26:54,035 | INFO     | transferring file log.45006595._050462.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/16/PanDA_Pilot-6678247785/log.45006595._050462.job.log.tgz.1 
[2025-06-04 10:27:25] 2025-06-04 10:26:54,035 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/16/PanDA_Pilot-6678247785/log.45006595._050462.job.log.tgz.1 /opt/boinc/instance_hom
[2025-06-04 10:27:25] 2025-06-04 10:26:54,094 | INFO     | adding to output.list: log.45006595._050462.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/c3/log.45006595._050462.job.log.tg
[2025-06-04 10:27:25] 2025-06-04 10:26:54,095 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:27:25] 2025-06-04 10:26:54,095 | INFO     | summary of transferred files:
[2025-06-04 10:27:25] 2025-06-04 10:26:54,095 | INFO     |  -- lfn=log.45006595._050462.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:27:25] 2025-06-04 10:26:54,096 | INFO     | stage-out finished correctly
[2025-06-04 10:27:25] 2025-06-04 10:26:54,809 | WARNING  | process 322604 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:27:25] 2025-06-04 10:26:54,810 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/16/PanDA_Pilot-6678247785/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:27:25] 2025-06-04 10:26:55,427 | INFO     | number of running child processes to parent process 322604: 1
[2025-06-04 10:27:25] 2025-06-04 10:26:55,427 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:27:25] 2025-06-04 10:26:55,714 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:27:25] 2025-06-04 10:26:57,570 | INFO     | job 6678247785 has state=finished
[2025-06-04 10:27:25] 2025-06-04 10:26:57,570 | INFO     | preparing for final server update for job 6678247785 in state='finished'
[2025-06-04 10:27:25] 2025-06-04 10:26:57,570 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:27:25] 2025-06-04 10:26:57,571 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:27:25] 2025-06-04 10:26:57,571 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:27:25] 2025-06-04 10:26:57,571 | INFO     | job 6678247785 has finished - writing final server update
[2025-06-04 10:27:25] 2025-06-04 10:26:57,571 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:27:25] 2025-06-04 10:26:57,581 | INFO     | executing command: lscpu
[2025-06-04 10:27:25] 2025-06-04 10:26:57,702 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:27:25] 2025-06-04 10:26:57,934 | INFO     | monitor loop #387: job 0:6678247785 is in state 'finished'
[2025-06-04 10:27:25] 2025-06-04 10:26:57,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:27:25] 2025-06-04 10:27:00,440 | INFO     | monitor loop #388: job 0:6678247785 is in state 'finished'
[2025-06-04 10:27:25] 2025-06-04 10:27:00,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:27:25] 2025-06-04 10:27:01,121 | INFO     | PID=299199 has CPU usage=19.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:27:25] 2025-06-04 10:27:01,121 | INFO     | .. there are 20 such processes running
[2025-06-04 10:27:25] 2025-06-04 10:27:02,942 | INFO     | monitor loop #389: job 0:6678247785 is in state 'finished'
[2025-06-04 10:27:25] 2025-06-04 10:27:02,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:27:25] 2025-06-04 10:27:03,867 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:27:25] 2025-06-04 10:27:03,867 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/16/PanDA_Pilot-6678247785/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:27:25] 2025-06-04 10:27:03,868 | INFO     | extracted standard info from prmon json
[2025-06-04 10:27:25] 2025-06-04 10:27:03,868 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:27:25] 2025-06-04 10:27:03,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:27:25] 2025-06-04 10:27:03,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:27:25] 2025-06-04 10:27:03,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:27:25] 2025-06-04 10:27:03,873 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:27:25] 2025-06-04 10:27:03,873 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | sum of deviations: 1503378854.9999998
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | mean x: 1749029854.5
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | mean y: 2644412.2608695654
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | -- intersect: -10888538904.52441
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | intersect: -10888538904.52441
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | chi2: 0.0023843599807695593
[2025-06-04 10:27:25] 2025-06-04 10:27:03,874 | INFO     | -- intersect: -10888538904.52441
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | current memory leak: 6.23 B/s (using 92 data points, chi2=0.00)
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | ..............................
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | . Timing measurements:
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | . get job = 0 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | . initial setup = 1 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | . payload setup = 8 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,875 | INFO     | . stage-in = 0 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,876 | INFO     | . payload execution = 6041 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,876 | INFO     | . stage-out = 1 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,876 | INFO     | . log creation = 0 s
[2025-06-04 10:27:25] 2025-06-04 10:27:03,876 | INFO     | ..............................
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | 
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | job summary report
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | --------------------------------------------------
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | PanDA job id: 6678247785
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | task id: 45006595
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | errors: (none)
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | pilot state: finished 
[2025-06-04 10:27:25] 2025-06-04 10:27:04,106 | INFO     | transexitcode: 0
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | exeerrorcode: 0
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | exeerrordiag: 
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | exitcode: 0
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | exitmsg: OK
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | cpuconsumptiontime: 39724 s
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | nevents: 400
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | neventsw: 0
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | pid: 322604
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | pgrp: 322604
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | corecount: 12
[2025-06-04 10:27:25] 2025-06-04 10:27:04,107 | INFO     | event service: False
[2025-06-04 10:27:25] 2025-06-04 10:27:04,108 | INFO     | sizes: {0: 2404981, 1: 2405236, 7: 2405442, 12: 2405470, 6053: 2432133, 6054: 2441122, 6056: 2441306, 6064: 2441476}
[2025-06-04 10:27:25] 2025-06-04 10:27:04,108 | INFO     | --------------------------------------------------
[2025-06-04 10:27:25] 2025-06-04 10:27:04,108 | INFO     | 
[2025-06-04 10:27:25] 2025-06-04 10:27:04,108 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/16
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:27:25] 2025-06-04 10:27:04,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:27:25] 2025-06-04 10:27:04,139 | INFO     | job 6678247785 has completed (purged errors)
[2025-06-04 10:27:25] 2025-06-04 10:27:04,139 | INFO     | overall cleanup function is called
[2025-06-04 10:27:25] 2025-06-04 10:27:05,145 | INFO     | --- collectZombieJob: --- 10, [322604]
[2025-06-04 10:27:25] 2025-06-04 10:27:05,146 | INFO     | zombie collector waiting for pid 322604
[2025-06-04 10:27:25] 2025-06-04 10:27:05,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:27:25] 2025-06-04 10:27:05,146 | INFO     | collected zombie processes
[2025-06-04 10:27:25] 2025-06-04 10:27:05,146 | INFO     | will attempt to kill all subprocesses of pid=322604
[2025-06-04 10:27:25] 2025-06-04 10:27:05,742 | INFO     | process IDs to be killed: [322604] (in reverse order)
[2025-06-04 10:27:25] 2025-06-04 10:27:06,017 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:27:25] 2025-06-04 10:27:06,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:27:25] 2025-06-04 10:27:06,043 | INFO     | did not find any defunct processes belonging to 322604
[2025-06-04 10:27:25] 2025-06-04 10:27:06,067 | INFO     | did not find any defunct processes belonging to 322604
[2025-06-04 10:27:25] 2025-06-04 10:27:06,067 | INFO     | ready for new job
[2025-06-04 10:27:25] 2025-06-04 10:27:06,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:27:25] 2025-06-04 10:27:06,070 | INFO     | **************************************
[2025-06-04 10:27:25] 2025-06-04 10:27:06,070 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:27:25] 2025-06-04 10:27:06,070 | INFO     | **************************************
[2025-06-04 10:27:25] 2025-06-04 10:27:06,070 | INFO     | 
[2025-06-04 10:27:25] 2025-06-04 10:27:06,081 | INFO     | architecture information:
[2025-06-04 10:27:25] 2025-06-04 10:27:06,081 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:27:25] 2025-06-04 10:27:06,101 | INFO     | cat /etc/os-release:
[2025-06-04 10:27:25] NAME="CentOS Linux"
[2025-06-04 10:27:25] VERSION="7 (Core)"
[2025-06-04 10:27:25] ID="centos"
[2025-06-04 10:27:25] ID_LIKE="rhel fedora"
[2025-06-04 10:27:25] VERSION_ID="7"
[2025-06-04 10:27:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:27:25] ANSI_COLOR="0;31"
[2025-06-04 10:27:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:27:25] HOME_URL="https://www.centos.org/"
[2025-06-04 10:27:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:27:25] 
[2025-06-04 10:27:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:27:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:27:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:27:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:27:25] 
[2025-06-04 10:27:25] 2025-06-04 10:27:06,101 | INFO     | **************************************
[2025-06-04 10:27:25] 2025-06-04 10:27:06,605 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/16
[2025-06-04 10:27:25] 2025-06-04 10:27:06,638 | INFO     | sufficient remaining disk space (311831822336 B)
[2025-06-04 10:27:25] 2025-06-04 10:27:06,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:27:25] 2025-06-04 10:27:06,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:27:25] 2025-06-04 10:27:06,639 | INFO     | update_server=False
[2025-06-04 10:27:25] 2025-06-04 10:27:06,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:27:25] 2025-06-04 10:27:06,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:27:25] 2025-06-04 10:27:06,639 | INFO     | aborting loop
[2025-06-04 10:27:25] 2025-06-04 10:27:06,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:27:25] 2025-06-04 10:27:07,148 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:27:25] 2025-06-04 10:27:07,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:27:25] 2025-06-04 10:27:07,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:27:25] 2025-06-04 10:27:07,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:27:25] 2025-06-04 10:27:07,353 | INFO     | all payload control threads have been joined
[2025-06-04 10:27:25] 2025-06-04 10:27:07,642 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:07,642 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:07,673 | INFO     | all data control threads have been joined
[2025-06-04 10:27:25] 2025-06-04 10:27:07,918 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:07,944 | INFO     | all job control threads have been joined
[2025-06-04 10:27:25] 2025-06-04 10:27:08,049 | INFO     | [job] validate thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:08,358 | INFO     | [payload] control thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:08,510 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:08,677 | INFO     | [data] control thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:08,733 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:08,766 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:08,949 | INFO     | [job] control thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:09,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:27:25] 2025-06-04 10:27:09,037 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:09,057 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:09,281 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:10,010 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:10,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:17,601 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:27:25] 2025-06-04 10:27:18,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:27:25] 2025-06-04 10:27:20,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114094483264)>', '<ExcThread(monitor, started 140113443026688)>']
[2025-06-04 10:27:25] 2025-06-04 10:27:20,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:27:25] 2025-06-04 10:27:20,222 | INFO     | [monitor] control thread has ended
[2025-06-04 10:27:25] 2025-06-04 10:27:25,141 | INFO     | all workflow threads have been joined
[2025-06-04 10:27:25] 2025-06-04 10:27:25,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:27:25] 2025-06-04 10:27:25,142 | INFO     | traces error code: 0
[2025-06-04 10:27:25] 2025-06-04 10:27:25,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:27:25] 2025-06-04 10:27:25,321 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:27:25] 2025-06-04 10:27:25,340 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:27:25] 2025-06-04 10:27:25,344 [wrapper] pilotpid: 299199
[2025-06-04 10:27:25] 2025-06-04 10:27:25,349 [wrapper] Pilot exit status: 0
[2025-06-04 10:27:25] 2025-06-04 10:27:25,421 [wrapper] pandaids: 6678247785
[2025-06-04 10:27:25] 2025-06-04 10:27:25,553 [wrapper] cleanup supervisor_pilot  621686 299200
[2025-06-04 10:27:25] 2025-06-04 10:27:25,594 [wrapper] Test setup, not cleaning
[2025-06-04 10:27:25] 2025-06-04 10:27:25,612 [wrapper] apfmon messages muted
[2025-06-04 10:27:25] 2025-06-04 10:27:25,616 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:27:25] 2025-06-04 10:27:25,621 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:27:25]  *** Error codes and diagnostics ***
[2025-06-04 10:27:25]     "exeErrorCode": 0,
[2025-06-04 10:27:25]     "exeErrorDiag": "",
[2025-06-04 10:27:25]     "pilotErrorCode": 0,
[2025-06-04 10:27:25]     "pilotErrorDiag": "",
[2025-06-04 10:27:25]  *** Listing of results directory ***
[2025-06-04 10:27:25] total 387876
[2025-06-04 10:27:25] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 10:27:25] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:13 queuedata.json
[2025-06-04 10:27:25] -rwx------ 1 boinc boinc     37140 Jun  4 02:15 runpilot2-wrapper.sh
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc       100 Jun  4 08:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:27:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 08:45 run_atlas
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc       105 Jun  4 08:45 job.xml
[2025-06-04 10:27:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:45 start_atlas.sh
[2025-06-04 10:27:25] drwxrwx--x 2 boinc boinc      4096 Jun  4 08:45 shared
[2025-06-04 10:27:25] -rw-r--r-- 2 boinc boinc    508880 Jun  4 08:45 input.tar.gz
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc      6951 Jun  4 08:45 init_data.xml
[2025-06-04 10:27:25] -rw-r--r-- 2 boinc boinc 214048253 Jun  4 08:45 EVNT.45006593._002023.pool.root.1
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc         0 Jun  4 08:45 boinc_lockfile
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc      2525 Jun  4 08:45 pandaJob.out
[2025-06-04 10:27:25] -rw------- 1 boinc boinc    986774 Jun  4 08:45 agis_schedconf.cvmfs.json
[2025-06-04 10:27:25] -rw------- 1 boinc boinc   1603667 Jun  4 08:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:27:25] drwx------ 4 boinc boinc      4096 Jun  4 08:45 pilot3
[2025-06-04 10:27:25] -rw------- 1 boinc boinc 177430559 Jun  4 10:26 HITS.45006595._050462.pool.root.1
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc       530 Jun  4 10:26 boinc_task_state.xml
[2025-06-04 10:27:25] -rw------- 1 boinc boinc        95 Jun  4 10:26 pilot_heartbeat.json
[2025-06-04 10:27:25] -rw------- 1 boinc boinc      1023 Jun  4 10:26 memory_monitor_summary.json
[2025-06-04 10:27:25] -rw------- 1 boinc boinc    380663 Jun  4 10:26 log.45006595._050462.job.log.tgz.1
[2025-06-04 10:27:25] -rw------- 1 boinc boinc      7648 Jun  4 10:27 heartbeat.json
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc        27 Jun  4 10:27 wrapper_checkpoint.txt
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 10:27 boinc_mmap_file
[2025-06-04 10:27:25] -rw------- 1 boinc boinc      4450 Jun  4 10:27 pilotlog.txt
[2025-06-04 10:27:25] -rw------- 1 boinc boinc    556767 Jun  4 10:27 log.45006595._050462.job.log.1
[2025-06-04 10:27:25] -rw------- 1 boinc boinc       357 Jun  4 10:27 output.list
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc       620 Jun  4 10:27 runtime_log
[2025-06-04 10:27:25] -rw------- 1 boinc boinc    952320 Jun  4 10:27 result.tar.gz
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc      8977 Jun  4 10:27 runtime_log.err
[2025-06-04 10:27:25] -rw------- 1 boinc boinc       651 Jun  4 10:27 S5GLDmZqsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdrmKDmvPt3So.diag
[2025-06-04 10:27:25] -rw-rw-r-- 1 boinc boinc     22039 Jun  4 10:27 stderr.txt
[2025-06-04 10:27:25] HITS file was successfully produced:
[2025-06-04 10:27:25] -rw------- 1 boinc boinc 177430559 Jun  4 10:26 shared/HITS.pool.root.1
[2025-06-04 10:27:25]  *** Contents of shared directory: ***
[2025-06-04 10:27:25] total 383764
[2025-06-04 10:27:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:45 start_atlas.sh
[2025-06-04 10:27:25] -rw-r--r-- 2 boinc boinc    508880 Jun  4 08:45 input.tar.gz
[2025-06-04 10:27:25] -rw-r--r-- 2 boinc boinc 214048253 Jun  4 08:45 ATLAS.root_0
[2025-06-04 10:27:25] -rw------- 1 boinc boinc 177430559 Jun  4 10:26 HITS.pool.root.1
[2025-06-04 10:27:25] -rw------- 1 boinc boinc    952320 Jun  4 10:27 result.tar.gz
10:27:27 (290432): run_atlas exited; CPU time 40032.913950
10:27:27 (290432): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN