Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:07:23 (20722): wrapper (7.7.26015): starting
03:07:23 (20722): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 03:07:23] Arguments: --nthreads 10
[2025-06-04 03:07:23] Threads: 10
[2025-06-04 03:07:23] Checking for CVMFS
[2025-06-04 03:07:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:07:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:07:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:07:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:07:25] 2.11.2.0 30725 103367 276596 146771 1 302 16435595 18432000 18151 130560 0 455489476 99.153 864926348 36475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:07:25] CVMFS is ok
[2025-06-04 03:07:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:07:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:07:25] Further information can be found at the LHC@home message board.
[2025-06-04 03:07:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:07:25] Checking for apptainer binary...
[2025-06-04 03:07:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:07:25] Running /usr/bin/apptainer --version
[2025-06-04 03:07:25] apptainer version 1.3.2-1.el7
[2025-06-04 03:07:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:07:33] c-210-28.aglt2.org
[2025-06-04 03:07:33] apptainer works
[2025-06-04 03:07:33] Set ATHENA_PROC_NUMBER=10
[2025-06-04 03:07:33] Set ATHENA_CORE_NUMBER=10
[2025-06-04 03:07:34] Starting ATLAS job with PandaID=6678246994
[2025-06-04 03:07:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:59:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:59:46] 2025-06-04 09:59:30,629 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:59:46] 2025-06-04 09:59:30,630 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678246994/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,630 | INFO     | extracted standard info from prmon json
[2025-06-04 05:59:46] 2025-06-04 09:59:30,630 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:59:46] 2025-06-04 09:59:30,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:59:46] 2025-06-04 09:59:30,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:59:46] 2025-06-04 09:59:30,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:59:46] 2025-06-04 09:59:30,633 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:59:46] 2025-06-04 09:59:30,634 | INFO     | sum of square deviations: 1367731834.5609758
[2025-06-04 05:59:46] 2025-06-04 09:59:30,634 | INFO     | sum of deviations: 50097611116.219475
[2025-06-04 05:59:46] 2025-06-04 09:59:30,634 | INFO     | mean x: 1749026148.621951
[2025-06-04 05:59:46] 2025-06-04 09:59:30,634 | INFO     | mean y: 2484201.93902439
[2025-06-04 05:59:46] 2025-06-04 09:59:30,634 | INFO     | -- intersect: -64061266901.64418
[2025-06-04 05:59:46] 2025-06-04 09:59:30,635 | INFO     | intersect: -64061266901.64418
[2025-06-04 05:59:46] 2025-06-04 09:59:30,635 | INFO     | chi2: 4.974066113248713
[2025-06-04 05:59:46] 2025-06-04 09:59:30,635 | INFO     | sum of square deviations: 1246414729.4842808
[2025-06-04 05:59:46] 2025-06-04 09:59:30,636 | INFO     | sum of deviations: 59399036142.3144
[2025-06-04 05:59:46] 2025-06-04 09:59:30,636 | INFO     | mean x: 1749025996.125786
[2025-06-04 05:59:46] 2025-06-04 09:59:30,636 | INFO     | mean y: 2495546.4842767296
[2025-06-04 05:59:46] 2025-06-04 09:59:30,636 | INFO     | -- intersect: -83348941098.2904
[2025-06-04 05:59:46] 2025-06-04 09:59:30,636 | INFO     | intersect: -83348941098.2904
[2025-06-04 05:59:46] 2025-06-04 09:59:30,637 | INFO     | chi2: 4.234942494731279
[2025-06-04 05:59:46] 2025-06-04 09:59:30,637 | INFO     | current chi2=4.234942494731279 (change=14.859545524510326 %)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,637 | INFO     | right removable region: 158
[2025-06-04 05:59:46] 2025-06-04 09:59:30,637 | INFO     | sum of square deviations: 1246402529.4842808
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | sum of deviations: -194744961.2830181
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | mean x: 1749026301.125786
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | mean y: 2547284.2641509436
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | -- intersect: 275825018.57415444
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | intersect: 275825018.57415444
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | chi2: 1.3527346978395958
[2025-06-04 05:59:46] 2025-06-04 09:59:30,638 | INFO     | current chi2=1.3527346978395958 (change=72.80424773131767 %)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,639 | INFO     | sum of square deviations: 1132468711.9025917
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | sum of deviations: -17702395234.571434
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | mean x: 1749026453.6298702
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | mean y: 2570556.4285714286
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | -- intersect: 27342802769.872673
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | intersect: 27342802769.872673
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | chi2: 0.8497297203260495
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | current chi2=0.8497297203260495 (change=37.184303641865434 %)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,640 | INFO     | sum of square deviations: 1025697819.3154355
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | sum of deviations: -19780682800.308727
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | mean x: 1749026606.1342282
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | mean y: 2573423.3154362417
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | -- intersect: 33732722648.291016
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | intersect: 33732722648.291016
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | chi2: 0.8122722229513026
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | current chi2=0.8122722229513026 (change=4.408166088432696 %)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,641 | INFO     | left removable region: 30
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | sum of square deviations: 650245380.875
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | sum of deviations: -4705630409.0625
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | mean x: 1749026880.65625
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | mean y: 2581208.703125
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | -- intersect: 12659763124.872593
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | intersect: 12659763124.872593
[2025-06-04 05:59:46] 2025-06-04 09:59:30,642 | INFO     | chi2: 0.005064999661930343
[2025-06-04 05:59:46] 2025-06-04 09:59:30,643 | INFO     | -- intersect: 12659763124.872593
[2025-06-04 05:59:46] 2025-06-04 09:59:30,643 | INFO     | current memory leak: -7.24 B/s (using 128 data points, chi2=0.01)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,643 | INFO     | ..............................
[2025-06-04 05:59:46] 2025-06-04 09:59:30,643 | INFO     | . Timing measurements:
[2025-06-04 05:59:46] 2025-06-04 09:59:30,643 | INFO     | . get job = 0 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | . initial setup = 5 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | . payload setup = 74 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | . stage-in = 0 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | . payload execution = 10021 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | . stage-out = 1 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | . log creation = 0 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,644 | INFO     | ..............................
[2025-06-04 05:59:46] 2025-06-04 09:59:30,789 | INFO     | 
[2025-06-04 05:59:46] 2025-06-04 09:59:30,790 | INFO     | job summary report
[2025-06-04 05:59:46] 2025-06-04 09:59:30,790 | INFO     | --------------------------------------------------
[2025-06-04 05:59:46] 2025-06-04 09:59:30,790 | INFO     | PanDA job id: 6678246994
[2025-06-04 05:59:46] 2025-06-04 09:59:30,790 | INFO     | task id: 45006595
[2025-06-04 05:59:46] 2025-06-04 09:59:30,790 | INFO     | errors: (none)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:59:46] 2025-06-04 09:59:30,803 | INFO     | pilot state: finished 
[2025-06-04 05:59:46] 2025-06-04 09:59:30,803 | INFO     | transexitcode: 0
[2025-06-04 05:59:46] 2025-06-04 09:59:30,803 | INFO     | exeerrorcode: 0
[2025-06-04 05:59:46] 2025-06-04 09:59:30,803 | INFO     | exeerrordiag: 
[2025-06-04 05:59:46] 2025-06-04 09:59:30,823 | INFO     | exitcode: 0
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | exitmsg: OK
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | cpuconsumptiontime: 45226 s
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | nevents: 400
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | neventsw: 0
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | pid: 8132
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | pgrp: 8132
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | corecount: 10
[2025-06-04 05:59:46] 2025-06-04 09:59:30,824 | INFO     | event service: False
[2025-06-04 05:59:46] 2025-06-04 09:59:30,825 | INFO     | sizes: {0: 2404349, 1: 2405205, 2: 2405233, 12: 2405233, 23: 2405261, 34: 2405289, 40: 2405651, 45: 2405679, 10099: 2434210, 10101: 2443151, 10103: 2443207, 10137:
[2025-06-04 05:59:46] 2025-06-04 09:59:30,825 | INFO     | --------------------------------------------------
[2025-06-04 05:59:46] 2025-06-04 09:59:30,825 | INFO     | 
[2025-06-04 05:59:46] 2025-06-04 09:59:30,825 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:59:46] 2025-06-04 09:59:30,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:59:46] 2025-06-04 09:59:30,916 | INFO     | job 6678246994 has completed (purged errors)
[2025-06-04 05:59:46] 2025-06-04 09:59:30,916 | INFO     | overall cleanup function is called
[2025-06-04 05:59:46] 2025-06-04 09:59:31,927 | INFO     | --- collectZombieJob: --- 10, [8132]
[2025-06-04 05:59:46] 2025-06-04 09:59:31,928 | INFO     | zombie collector waiting for pid 8132
[2025-06-04 05:59:46] 2025-06-04 09:59:31,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:59:46] 2025-06-04 09:59:31,928 | INFO     | collected zombie processes
[2025-06-04 05:59:46] 2025-06-04 09:59:31,928 | INFO     | will attempt to kill all subprocesses of pid=8132
[2025-06-04 05:59:46] 2025-06-04 09:59:32,440 | INFO     | process IDs to be killed: [8132] (in reverse order)
[2025-06-04 05:59:46] 2025-06-04 09:59:32,661 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:59:46] 2025-06-04 09:59:32,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:59:46] 2025-06-04 09:59:32,672 | INFO     | did not find any defunct processes belonging to 8132
[2025-06-04 05:59:46] 2025-06-04 09:59:32,685 | INFO     | did not find any defunct processes belonging to 8132
[2025-06-04 05:59:46] 2025-06-04 09:59:32,686 | INFO     | ready for new job
[2025-06-04 05:59:46] 2025-06-04 09:59:32,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:59:46] 2025-06-04 09:59:32,687 | INFO     | **************************************
[2025-06-04 05:59:46] 2025-06-04 09:59:32,688 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:59:46] 2025-06-04 09:59:32,688 | INFO     | **************************************
[2025-06-04 05:59:46] 2025-06-04 09:59:32,688 | INFO     | 
[2025-06-04 05:59:46] 2025-06-04 09:59:32,690 | INFO     | architecture information:
[2025-06-04 05:59:46] 2025-06-04 09:59:32,691 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:59:46] 2025-06-04 09:59:32,722 | INFO     | cat /etc/os-release:
[2025-06-04 05:59:46] NAME="CentOS Linux"
[2025-06-04 05:59:46] VERSION="7 (Core)"
[2025-06-04 05:59:46] ID="centos"
[2025-06-04 05:59:46] ID_LIKE="rhel fedora"
[2025-06-04 05:59:46] VERSION_ID="7"
[2025-06-04 05:59:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:59:46] ANSI_COLOR="0;31"
[2025-06-04 05:59:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:59:46] HOME_URL="https://www.centos.org/"
[2025-06-04 05:59:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:59:46] 
[2025-06-04 05:59:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:59:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:59:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:59:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:59:46] 
[2025-06-04 05:59:46] 2025-06-04 09:59:32,724 | INFO     | **************************************
[2025-06-04 05:59:46] 2025-06-04 09:59:33,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:59:46] 2025-06-04 09:59:33,287 | INFO     | sufficient remaining disk space (57041485824 B)
[2025-06-04 05:59:46] 2025-06-04 09:59:33,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:59:46] 2025-06-04 09:59:33,287 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:59:46] 2025-06-04 09:59:33,287 | INFO     | update_server=False
[2025-06-04 05:59:46] 2025-06-04 09:59:33,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:59:46] 2025-06-04 09:59:33,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:59:46] 2025-06-04 09:59:33,395 | INFO     | all data control threads have been joined
[2025-06-04 05:59:46] 2025-06-04 09:59:33,584 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:59:46] 2025-06-04 09:59:33,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:59:46] 2025-06-04 09:59:33,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:59:46] 2025-06-04 09:59:33,768 | INFO     | all payload control threads have been joined
[2025-06-04 05:59:46] 2025-06-04 09:59:34,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:59:46] 2025-06-04 09:59:34,051 | INFO     | aborting loop
[2025-06-04 05:59:46] 2025-06-04 09:59:34,294 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:34,402 | INFO     | [data] control thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:34,453 | INFO     | all job control threads have been joined
[2025-06-04 05:59:46] 2025-06-04 09:59:34,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:59:46] 2025-06-04 09:59:34,775 | INFO     | [payload] control thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,057 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,192 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,296 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,350 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,460 | INFO     | [job] control thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,665 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,670 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,750 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,760 | INFO     | [job] validate thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,785 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:35,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:59:46] 2025-06-04 09:59:36,802 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:38,497 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:59:46] 2025-06-04 09:59:39,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962938386240)>', '<ExcThread(monitor, started 139962481620736)>']
[2025-06-04 05:59:46] 2025-06-04 09:59:40,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:59:46] 2025-06-04 09:59:40,626 | INFO     | [monitor] control thread has ended
[2025-06-04 05:59:46] 2025-06-04 09:59:44,840 | INFO     | all workflow threads have been joined
[2025-06-04 05:59:46] 2025-06-04 09:59:44,841 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:59:46] 2025-06-04 09:59:44,841 | INFO     | traces error code: 0
[2025-06-04 05:59:46] 2025-06-04 09:59:44,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:59:46] 2025-06-04 09:59:45,217 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:59:46] 2025-06-04 09:59:45,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:59:46] 2025-06-04 09:59:45,234 [wrapper] pilotpid: 29308
[2025-06-04 05:59:46] 2025-06-04 09:59:45,239 [wrapper] Pilot exit status: 0
[2025-06-04 05:59:46] 2025-06-04 09:59:45,312 [wrapper] pandaids: 6678246994
[2025-06-04 05:59:46] 2025-06-04 09:59:45,416 [wrapper] cleanup supervisor_pilot 30515 29309
[2025-06-04 05:59:46] 2025-06-04 09:59:45,445 [wrapper] Test setup, not cleaning
[2025-06-04 05:59:46] 2025-06-04 09:59:45,461 [wrapper] apfmon messages muted
[2025-06-04 05:59:46] 2025-06-04 09:59:45,471 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:59:46] 2025-06-04 09:59:45,477 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:59:46]  *** Error codes and diagnostics ***
[2025-06-04 05:59:46]     "exeErrorCode": 0,
[2025-06-04 05:59:46]     "exeErrorDiag": "",
[2025-06-04 05:59:46]     "pilotErrorCode": 0,
[2025-06-04 05:59:46]     "pilotErrorDiag": "",
[2025-06-04 05:59:46]  *** Listing of results directory ***
[2025-06-04 05:59:46] total 388020
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 21:59 pilot3.tar.gz
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 22:07 queuedata.json
[2025-06-04 05:59:46] -rwx------ 1 boincer umatlas     37140 Jun  3 22:08 runpilot2-wrapper.sh
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:59:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:07 run_atlas
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:07 job.xml
[2025-06-04 05:59:46] -rw-r--r-- 2 boincer umatlas 217277989 Jun  4 03:07 EVNT.45006593._002018.pool.root.1
[2025-06-04 05:59:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:07 start_atlas.sh
[2025-06-04 05:59:46] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:07 shared
[2025-06-04 05:59:46] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 03:07 input.tar.gz
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:07 boinc_lockfile
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas      2521 Jun  4 03:07 pandaJob.out
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas    986745 Jun  4 03:08 agis_schedconf.cvmfs.json
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas   1603667 Jun  4 03:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:59:46] drwx------ 4 boincer umatlas      4096 Jun  4 03:08 pilot3
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas 173682222 Jun  4 05:57 HITS.45006595._050322.pool.root.1
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas       530 Jun  4 05:58 boinc_task_state.xml
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas      1064 Jun  4 05:58 memory_monitor_summary.json
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas      6229 Jun  4 05:58 init_data.xml
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas    373104 Jun  4 05:58 log.45006595._050322.job.log.tgz.1
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas        95 Jun  4 05:58 pilot_heartbeat.json
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas      7756 Jun  4 05:59 heartbeat.json
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas        28 Jun  4 05:59 wrapper_checkpoint.txt
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:59 boinc_mmap_file
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas      4353 Jun  4 05:59 pilotlog.txt
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas    895993 Jun  4 05:59 log.45006595._050322.job.log.1
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas       357 Jun  4 05:59 output.list
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:59 runtime_log
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas   1290240 Jun  4 05:59 result.tar.gz
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas       662 Jun  4 05:59 4l0KDmUjsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFpmKDmYHFFMm.diag
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas      8662 Jun  4 05:59 runtime_log.err
[2025-06-04 05:59:46] -rw-r--r-- 1 boincer umatlas     20907 Jun  4 05:59 stderr.txt
[2025-06-04 05:59:46] HITS file was successfully produced:
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas 173682222 Jun  4 05:57 shared/HITS.pool.root.1
[2025-06-04 05:59:46]  *** Contents of shared directory: ***
[2025-06-04 05:59:46] total 383580
[2025-06-04 05:59:46] -rw-r--r-- 2 boincer umatlas 217277989 Jun  4 03:07 ATLAS.root_0
[2025-06-04 05:59:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:07 start_atlas.sh
[2025-06-04 05:59:46] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 03:07 input.tar.gz
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas 173682222 Jun  4 05:57 HITS.pool.root.1
[2025-06-04 05:59:46] -rw------- 1 boincer umatlas   1290240 Jun  4 05:59 result.tar.gz
05:59:47 (20722): run_atlas exited; CPU time 45382.534349
05:59:47 (20722): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN