Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:32 (6572): wrapper (7.7.26015): starting
16:54:32 (6572): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:54:32] Arguments: --nthreads 8
[2025-06-04 16:54:32] Threads: 8
[2025-06-04 16:54:32] Checking for CVMFS
[2025-06-04 16:54:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:54:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:54:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:54:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:54:34] 2.11.2.0 5632 33348 94140 146783 1 52 20763166 25165825 3750 130560 0 17019436 99.785 19982804 2136 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 16:54:34] CVMFS is ok
[2025-06-04 16:54:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:54:34] Checking for apptainer binary...
[2025-06-04 16:54:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:54:34] Running /usr/bin/apptainer --version
[2025-06-04 16:54:34] apptainer version 1.3.2-1.el7
[2025-06-04 16:54:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:54:42] cg-vwn252.simple-grid.lan
[2025-06-04 16:54:42] apptainer works
[2025-06-04 16:54:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:54:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:54:42] Starting ATLAS job with PandaID=6678074773
[2025-06-04 16:54:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:23:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:23:34] 2025-06-04 18:48:38,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:23:34] 2025-06-04 18:48:38,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:23:34] 2025-06-04 18:48:38,706 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:23:34] 2025-06-04 18:48:38,707 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,709 | INFO     | sum of deviations: 10899700880.999992
[2025-06-04 21:23:34] 2025-06-04 18:48:38,709 | INFO     | mean x: 1749056113.5
[2025-06-04 21:23:34] 2025-06-04 18:48:38,709 | INFO     | mean y: 2469907.581818182
[2025-06-04 21:23:34] 2025-06-04 18:48:38,709 | INFO     | -- intersect: -5771583934.763647
[2025-06-04 21:23:34] 2025-06-04 18:48:38,710 | INFO     | intersect: -5771583934.763647
[2025-06-04 21:23:34] 2025-06-04 18:48:38,710 | INFO     | chi2: 2.445403612090772
[2025-06-04 21:23:34] 2025-06-04 18:48:38,710 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,712 | INFO     | sum of deviations: 25053738341.999996
[2025-06-04 21:23:34] 2025-06-04 18:48:38,712 | INFO     | mean x: 1749055961.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,712 | INFO     | mean y: 2479531.9023255813
[2025-06-04 21:23:34] 2025-06-04 18:48:38,713 | INFO     | -- intersect: -14217266306.459177
[2025-06-04 21:23:34] 2025-06-04 18:48:38,713 | INFO     | intersect: -14217266306.459177
[2025-06-04 21:23:34] 2025-06-04 18:48:38,713 | INFO     | chi2: 1.6759725300258173
[2025-06-04 21:23:34] 2025-06-04 18:48:38,713 | INFO     | current chi2=1.6759725300258173 (change=31.464379878260928 %)
[2025-06-04 21:23:34] 2025-06-04 18:48:38,714 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 21:23:34] 2025-06-04 18:48:38,715 | INFO     | sum of deviations: 24445974419.000008
[2025-06-04 21:23:34] 2025-06-04 18:48:38,716 | INFO     | mean x: 1749055808.5
[2025-06-04 21:23:34] 2025-06-04 18:48:38,716 | INFO     | mean y: 2479090.5523809525
[2025-06-04 21:23:34] 2025-06-04 18:48:38,716 | INFO     | -- intersect: -14887173333.131433
[2025-06-04 21:23:34] 2025-06-04 18:48:38,716 | INFO     | intersect: -14887173333.131433
[2025-06-04 21:23:34] 2025-06-04 18:48:38,716 | INFO     | chi2: 1.6770948174167368
[2025-06-04 21:23:34] 2025-06-04 18:48:38,716 | INFO     | current chi2=1.6770948174167368 (change=-0.06696335237083427 %)
[2025-06-04 21:23:34] 2025-06-04 18:48:38,717 | INFO     | right removable region: 209
[2025-06-04 21:23:34] 2025-06-04 18:48:38,717 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,719 | INFO     | sum of deviations: -25212734964.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,719 | INFO     | mean x: 1749056266.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,719 | INFO     | mean y: 2494703.851162791
[2025-06-04 21:23:34] 2025-06-04 18:48:38,719 | INFO     | -- intersect: 14312484722.204687
[2025-06-04 21:23:34] 2025-06-04 18:48:38,719 | INFO     | intersect: 14312484722.204687
[2025-06-04 21:23:34] 2025-06-04 18:48:38,720 | INFO     | chi2: 0.8976163511677682
[2025-06-04 21:23:34] 2025-06-04 18:48:38,720 | INFO     | current chi2=0.8976163511677682 (change=63.29373414148498 %)
[2025-06-04 21:23:34] 2025-06-04 18:48:38,720 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 21:23:34] 2025-06-04 18:48:38,722 | INFO     | sum of deviations: -24197961076.5
[2025-06-04 21:23:34] 2025-06-04 18:48:38,722 | INFO     | mean x: 1749056418.5
[2025-06-04 21:23:34] 2025-06-04 18:48:38,722 | INFO     | mean y: 2493930.680952381
[2025-06-04 21:23:34] 2025-06-04 18:48:38,722 | INFO     | -- intersect: 14741090530.401508
[2025-06-04 21:23:34] 2025-06-04 18:48:38,722 | INFO     | intersect: 14741090530.401508
[2025-06-04 21:23:34] 2025-06-04 18:48:38,723 | INFO     | chi2: 0.8843257056594073
[2025-06-04 21:23:34] 2025-06-04 18:48:38,723 | INFO     | current chi2=0.8843257056594073 (change=1.4806599156833788 %)
[2025-06-04 21:23:34] 2025-06-04 18:48:38,723 | INFO     | left removable region: 20
[2025-06-04 21:23:34] 2025-06-04 18:48:38,723 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,724 | INFO     | sum of deviations: 3921344557.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,725 | INFO     | mean x: 1749056388.0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,725 | INFO     | mean y: 2492946.5714285714
[2025-06-04 21:23:34] 2025-06-04 18:48:38,725 | INFO     | -- intersect: -3273833268.285407
[2025-06-04 21:23:34] 2025-06-04 18:48:38,725 | INFO     | intersect: -3273833268.285407
[2025-06-04 21:23:34] 2025-06-04 18:48:38,725 | INFO     | chi2: 0.014613496756544442
[2025-06-04 21:23:34] 2025-06-04 18:48:38,725 | INFO     | -- intersect: -3273833268.285407
[2025-06-04 21:23:34] 2025-06-04 18:48:38,726 | INFO     | current memory leak: 1.87 B/s (using 189 data points, chi2=0.01)
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | ..............................
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . Timing measurements:
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . get job = 0 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . initial setup = 6 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . payload setup = 133 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . stage-in = 0 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . payload execution = 13435 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . stage-out = 3 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | . log creation = 1 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,727 | INFO     | ..............................
[2025-06-04 21:23:34] 2025-06-04 18:48:38,866 | INFO     | 
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | job summary report
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | --------------------------------------------------
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | PanDA job id: 6678074773
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | task id: 45006595
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | errors: (none)
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | pilot state: finished 
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | transexitcode: 0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,867 | INFO     | exeerrorcode: 0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | exeerrordiag: 
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | exitcode: 0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | exitmsg: OK
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | cpuconsumptiontime: 49936 s
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | nevents: 400
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | neventsw: 0
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | pid: 18531
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | pgrp: 18531
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | corecount: 8
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | event service: False
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | sizes: {0: 2396513, 1: 2397199, 2: 2397398, 13: 2397398, 24: 2397454, 35: 2397482, 45: 2397638, 56: 2397666, 67: 2397694, 78: 2397722, 88: 2397778, 93: 2398292, 99
[2025-06-04 21:23:34] 2025-06-04 18:48:38,868 | INFO     | --------------------------------------------------
[2025-06-04 21:23:34] 2025-06-04 18:48:38,869 | INFO     | 
[2025-06-04 21:23:34] 2025-06-04 18:48:38,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-04 21:23:34] 2025-06-04 18:48:39,293 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | job 6678074773 has completed (purged errors)
[2025-06-04 21:23:34] 2025-06-04 18:48:39,295 | INFO     | overall cleanup function is called
[2025-06-04 21:23:34] 2025-06-04 18:48:40,304 | INFO     | --- collectZombieJob: --- 10, [18531]
[2025-06-04 21:23:34] 2025-06-04 18:48:40,305 | INFO     | zombie collector waiting for pid 18531
[2025-06-04 21:23:34] 2025-06-04 18:48:40,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:23:34] 2025-06-04 18:48:40,305 | INFO     | collected zombie processes
[2025-06-04 21:23:34] 2025-06-04 18:48:40,305 | INFO     | will attempt to kill all subprocesses of pid=18531
[2025-06-04 21:23:34] 2025-06-04 18:48:40,437 | INFO     | process IDs to be killed: [18531] (in reverse order)
[2025-06-04 21:23:34] 2025-06-04 18:48:41,181 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:23:34] 2025-06-04 18:48:41,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:23:34] 2025-06-04 18:48:41,185 | INFO     | did not find any defunct processes belonging to 18531
[2025-06-04 21:23:34] 2025-06-04 18:48:41,196 | INFO     | did not find any defunct processes belonging to 18531
[2025-06-04 21:23:34] 2025-06-04 18:48:41,196 | INFO     | ready for new job
[2025-06-04 21:23:34] 2025-06-04 18:48:41,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:23:34] 2025-06-04 18:48:41,198 | INFO     | **************************************
[2025-06-04 21:23:34] 2025-06-04 18:48:41,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:23:34] 2025-06-04 18:48:41,199 | INFO     | **************************************
[2025-06-04 21:23:34] 2025-06-04 18:48:41,199 | INFO     | 
[2025-06-04 21:23:34] 2025-06-04 18:48:41,199 | INFO     | pilot is running in a VM
[2025-06-04 21:23:34] 2025-06-04 18:48:41,199 | INFO     | architecture information:
[2025-06-04 21:23:34] 2025-06-04 18:48:41,205 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:23:34] 2025-06-04 18:48:41,418 | INFO     | cat /etc/os-release:
[2025-06-04 21:23:34] NAME="CentOS Linux"
[2025-06-04 21:23:34] VERSION="7 (Core)"
[2025-06-04 21:23:34] ID="centos"
[2025-06-04 21:23:34] ID_LIKE="rhel fedora"
[2025-06-04 21:23:34] VERSION_ID="7"
[2025-06-04 21:23:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:23:34] ANSI_COLOR="0;31"
[2025-06-04 21:23:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:23:34] HOME_URL="https://www.centos.org/"
[2025-06-04 21:23:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:23:34] 
[2025-06-04 21:23:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:23:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:23:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:23:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:23:34] 
[2025-06-04 21:23:34] 2025-06-04 18:48:41,419 | INFO     | **************************************
[2025-06-04 21:23:34] 2025-06-04 18:48:41,923 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-04 21:23:34] 2025-06-04 18:48:42,097 | INFO     | sufficient remaining disk space (497003003904 B)
[2025-06-04 21:23:34] 2025-06-04 18:48:42,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:23:34] 2025-06-04 18:48:42,098 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:23:34] 2025-06-04 18:48:42,098 | INFO     | update_server=False
[2025-06-04 21:23:34] 2025-06-04 18:48:42,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:23:34] 2025-06-04 18:48:42,098 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:23:34] 2025-06-04 18:48:42,098 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:23:34] 2025-06-04 18:48:42,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:23:34] 2025-06-04 18:48:42,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:23:34] 2025-06-04 18:48:42,105 | INFO     | all data control threads have been joined
[2025-06-04 21:23:34] 2025-06-04 18:48:42,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:23:34] 2025-06-04 18:48:42,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:23:34] 2025-06-04 18:48:42,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:23:34] 2025-06-04 18:48:42,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:23:34] 2025-06-04 18:48:42,491 | INFO     | will abort loop
[2025-06-04 21:23:34] 2025-06-04 18:48:42,775 | INFO     | all payload control threads have been joined
[2025-06-04 21:23:34] 2025-06-04 18:48:43,104 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:43,111 | INFO     | [data] control thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:43,244 | INFO     | all job control threads have been joined
[2025-06-04 21:23:34] 2025-06-04 18:48:43,498 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:43,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:23:34] 2025-06-04 18:48:43,697 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:43,763 | INFO     | [job] validate thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:43,781 | INFO     | [payload] control thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:43,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:23:34] 2025-06-04 18:48:43,977 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,112 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,230 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,250 | INFO     | [job] control thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,439 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,472 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,568 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:44,888 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:47,517 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:52,232 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:23:34] 2025-06-04 18:48:53,238 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:23:34] 2025-06-04 18:48:54,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953858266944)>', '<ExcThread(monitor, started 139953547749120)>']
[2025-06-04 21:23:34] 2025-06-04 18:48:55,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:23:34] 2025-06-04 18:48:55,176 | INFO     | [monitor] control thread has ended
[2025-06-04 21:23:34] 2025-06-04 18:48:59,226 | INFO     | all workflow threads have been joined
[2025-06-04 21:23:34] 2025-06-04 18:48:59,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:23:34] 2025-06-04 18:48:59,227 | INFO     | traces error code: 0
[2025-06-04 21:23:34] 2025-06-04 18:48:59,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:23:34] 2025-06-04 18:48:59,578 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:23:34] 2025-06-04 18:48:59,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:23:34] 2025-06-04 18:48:59,691 [wrapper] pilotpid: 11869
[2025-06-04 21:23:34] 2025-06-04 18:48:59,754 [wrapper] Pilot exit status: 0
[2025-06-04 21:23:34] 2025-06-04 18:49:00,192 [wrapper] pandaids: 6678074773
[2025-06-04 21:23:34] 2025-06-04 18:49:00,597 [wrapper] cleanup supervisor_pilot 30763 11870
[2025-06-04 21:23:34] 2025-06-04 18:49:00,669 [wrapper] Test setup, not cleaning
[2025-06-04 21:23:34] 2025-06-04 18:49:00,779 [wrapper] apfmon messages muted
[2025-06-04 21:23:34] 2025-06-04 18:49:00,865 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:23:34] 2025-06-04 18:49:00,954 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:23:34]  *** Error codes and diagnostics ***
[2025-06-04 21:23:34]     "exeErrorCode": 0,
[2025-06-04 21:23:34]     "exeErrorDiag": "",
[2025-06-04 21:23:34]     "pilotErrorCode": 0,
[2025-06-04 21:23:34]     "pilotErrorDiag": "",
[2025-06-04 21:23:34]  *** Listing of results directory ***
[2025-06-04 21:23:34] total 390356
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:15 pilot3.tar.gz
[2025-06-04 21:23:34] -rwx------. 1 boinc boinc     37140 Jun  3 23:37 runpilot2-wrapper.sh
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:37 queuedata.json
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc       100 Jun  4 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:23:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 16:54 run_atlas
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc       105 Jun  4 16:54 job.xml
[2025-06-04 21:23:34] -rw-r--r--. 2 boinc boinc 215736956 Jun  4 16:54 EVNT.45006593._001847.pool.root.1
[2025-06-04 21:23:34] -rw-r--r--. 2 boinc boinc    508881 Jun  4 16:54 input.tar.gz
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc      6391 Jun  4 16:54 init_data.xml
[2025-06-04 21:23:34] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:54 start_atlas.sh
[2025-06-04 21:23:34] drwxrwx--x. 2 boinc boinc        68 Jun  4 16:54 shared
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc         0 Jun  4 16:54 boinc_lockfile
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc      2524 Jun  4 16:54 pandaJob.out
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc    987207 Jun  4 16:57 agis_schedconf.cvmfs.json
[2025-06-04 21:23:34] drwx------. 4 boinc boinc      4096 Jun  4 16:57 pilot3
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc 176991790 Jun  4 20:45 HITS.45006595._046060.pool.root.1
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc       531 Jun  4 20:45 boinc_task_state.xml
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc      1030 Jun  4 20:46 memory_monitor_summary.json
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc   1598969 Jun  4 20:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc    399104 Jun  4 20:47 log.45006595._046060.job.log.tgz.1
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc        95 Jun  4 20:48 pilot_heartbeat.json
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc      7684 Jun  4 20:48 heartbeat.json
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc      4798 Jun  4 20:48 pilotlog.txt
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc   1187842 Jun  4 20:49 log.45006595._046060.job.log.1
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc       357 Jun  4 20:49 output.list
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:49 runtime_log
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc   1607680 Jun  4 20:49 result.tar.gz
[2025-06-04 21:23:34] -rw-------. 1 boinc boinc       657 Jun  4 20:49 xZCNDmUVog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtFmKDmXlQXdn.diag
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc      8673 Jun  4 20:49 runtime_log.err
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:23 boinc_mmap_file
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:23 wrapper_checkpoint.txt
[2025-06-04 21:23:34] -rw-r--r--. 1 boinc boinc     20478 Jun  4 21:23 stderr.txt
[2025-06-04 21:23:35] HITS file was successfully produced:
[2025-06-04 21:23:35] -rw-------. 1 boinc boinc 176991790 Jun  4 20:45 shared/HITS.pool.root.1
[2025-06-04 21:23:35]  *** Contents of shared directory: ***
[2025-06-04 21:23:35] total 385616
[2025-06-04 21:23:35] -rw-r--r--. 2 boinc boinc 215736956 Jun  4 16:54 ATLAS.root_0
[2025-06-04 21:23:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 16:54 input.tar.gz
[2025-06-04 21:23:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:54 start_atlas.sh
[2025-06-04 21:23:35] -rw-------. 1 boinc boinc 176991790 Jun  4 20:45 HITS.pool.root.1
[2025-06-04 21:23:35] -rw-------. 1 boinc boinc   1607680 Jun  4 20:49 result.tar.gz
21:23:36 (6572): run_atlas exited; CPU time 50122.476614
21:23:36 (6572): called boinc_finish(0)

</stderr_txt>
]]>

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