Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:54:48 (1158187): wrapper (7.7.26015): starting
20:54:48 (1158187): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 20:54:48] Arguments: --nthreads 4
[2025-06-05 20:54:48] Threads: 4
[2025-06-05 20:54:48] Checking for CVMFS
[2025-06-05 20:54:48] No cvmfs_config command found, will try listing directly
[2025-06-05 20:54:48] CVMFS is ok
[2025-06-05 20:54:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 20:54:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 20:54:48] Further information can be found at the LHC@home message board.
[2025-06-05 20:54:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:54:48] Checking for apptainer binary...
[2025-06-05 20:54:48] which: no apptainer in ((null))
[2025-06-05 20:54:48] apptainer is not installed, using version from CVMFS
[2025-06-05 20:54:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:54:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 20:54:48] apptainer works
[2025-06-05 20:54:48] Set ATHENA_PROC_NUMBER=4
[2025-06-05 20:54:48] Set ATHENA_CORE_NUMBER=4
[2025-06-05 20:54:48] Starting ATLAS job with PandaID=6678213816
[2025-06-05 20:54:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:26:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:26:06] 2025-06-05 21:25:43,255 | WARNING  | process 1176415 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 23:26:06] 2025-06-05 21:25:43,256 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6678213816/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:26:06] 2025-06-05 21:25:43,925 | INFO     | number of running child processes to parent process 1176415: 1
[2025-06-05 23:26:06] 2025-06-05 21:25:43,926 | INFO     | maximum number of monitored processes: 6
[2025-06-05 23:26:06] 2025-06-05 21:25:44,562 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 23:26:06] 2025-06-05 21:25:44,562 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6678213816/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,563 | INFO     | extracted standard info from prmon json
[2025-06-05 23:26:06] 2025-06-05 21:25:44,564 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:26:06] 2025-06-05 21:25:44,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:26:06] 2025-06-05 21:25:44,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:26:06] 2025-06-05 21:25:44,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:26:06] 2025-06-05 21:25:44,567 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:26:06] 2025-06-05 21:25:44,568 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,569 | INFO     | sum of deviations: 25412361063.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,569 | INFO     | mean x: 1749154216.5
[2025-06-05 23:26:06] 2025-06-05 21:25:44,569 | INFO     | mean y: 2289042.2297297297
[2025-06-05 23:26:06] 2025-06-05 21:25:44,569 | INFO     | -- intersect: -44218794112.89514
[2025-06-05 23:26:06] 2025-06-05 21:25:44,569 | INFO     | intersect: -44218794112.89514
[2025-06-05 23:26:06] 2025-06-05 21:25:44,569 | INFO     | chi2: 1.5983455074279005
[2025-06-05 23:26:06] 2025-06-05 21:25:44,570 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,570 | INFO     | sum of deviations: 24430622183.000004
[2025-06-05 23:26:06] 2025-06-05 21:25:44,571 | INFO     | mean x: 1749154064.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,571 | INFO     | mean y: 2287520.965034965
[2025-06-05 23:26:06] 2025-06-05 21:25:44,571 | INFO     | -- intersect: -47127696549.77386
[2025-06-05 23:26:06] 2025-06-05 21:25:44,571 | INFO     | intersect: -47127696549.77386
[2025-06-05 23:26:06] 2025-06-05 21:25:44,571 | INFO     | chi2: 1.5996551883278882
[2025-06-05 23:26:06] 2025-06-05 21:25:44,571 | INFO     | current chi2=1.5996551883278882 (change=-0.08193978672954783 %)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,572 | INFO     | right removable region: 142
[2025-06-05 23:26:06] 2025-06-05 21:25:44,572 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,573 | INFO     | sum of deviations: 2356015688.0000005
[2025-06-05 23:26:06] 2025-06-05 21:25:44,573 | INFO     | mean x: 1749154369.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,573 | INFO     | mean y: 2324256.167832168
[2025-06-05 23:26:06] 2025-06-05 21:25:44,573 | INFO     | -- intersect: -4542750379.098103
[2025-06-05 23:26:06] 2025-06-05 21:25:44,573 | INFO     | intersect: -4542750379.098103
[2025-06-05 23:26:06] 2025-06-05 21:25:44,574 | INFO     | chi2: 0.0011926231517319081
[2025-06-05 23:26:06] 2025-06-05 21:25:44,574 | INFO     | current chi2=0.0011926231517319081 (change=99.92538389564776 %)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,574 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 23:26:06] 2025-06-05 21:25:44,575 | INFO     | sum of deviations: 2002640492.0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,575 | INFO     | mean x: 1749154521.5
[2025-06-05 23:26:06] 2025-06-05 21:25:44,575 | INFO     | mean y: 2324835.1014492754
[2025-06-05 23:26:06] 2025-06-05 21:25:44,575 | INFO     | -- intersect: -4296386596.376054
[2025-06-05 23:26:06] 2025-06-05 21:25:44,575 | INFO     | intersect: -4296386596.376054
[2025-06-05 23:26:06] 2025-06-05 21:25:44,575 | INFO     | chi2: 0.0010468481718095308
[2025-06-05 23:26:06] 2025-06-05 21:25:44,576 | INFO     | current chi2=0.0010468481718095308 (change=12.223054676633211 %)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,576 | INFO     | left removable region: 20
[2025-06-05 23:26:06] 2025-06-05 21:25:44,576 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | sum of deviations: 2120392940.0000002
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | mean x: 1749154643.5
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | mean y: 2323859.5081967213
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | -- intersect: -6585103215.624898
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | intersect: -6585103215.624898
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | chi2: 0.00016727047825257393
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | -- intersect: -6585103215.624898
[2025-06-05 23:26:06] 2025-06-05 21:25:44,577 | INFO     | current memory leak: 3.77 B/s (using 122 data points, chi2=0.00)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,578 | INFO     | ..............................
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . Timing measurements:
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . get job = 0 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . initial setup = 1 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . payload setup = 9 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . stage-in = 0 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . payload execution = 9006 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . stage-out = 0 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | . log creation = 0 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,579 | INFO     | ..............................
[2025-06-05 23:26:06] 2025-06-05 21:25:44,674 | INFO     | 
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | job summary report
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | --------------------------------------------------
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | PanDA job id: 6678213816
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | task id: 45006595
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | errors: (none)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | pilot state: finished 
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | transexitcode: 0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,675 | INFO     | exeerrorcode: 0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | exeerrordiag: 
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | exitcode: 0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | exitmsg: OK
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | cpuconsumptiontime: 34190 s
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | nevents: 400
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | neventsw: 0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | pid: 1176415
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | pgrp: 1176415
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | corecount: 4
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | event service: False
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | sizes: {0: 2397351, 6: 2397557, 11: 2397585, 9016: 2425907, 9017: 2425906, 9018: 2434925, 9021: 2435109, 9027: 2435279}
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | --------------------------------------------------
[2025-06-05 23:26:06] 2025-06-05 21:25:44,676 | INFO     | 
[2025-06-05 23:26:06] 2025-06-05 21:25:44,677 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-06-05 23:26:06] 2025-06-05 21:25:44,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | job 6678213816 has completed (purged errors)
[2025-06-05 23:26:06] 2025-06-05 21:25:44,705 | INFO     | overall cleanup function is called
[2025-06-05 23:26:06] 2025-06-05 21:25:45,196 | INFO     | PID=1166006 has CPU usage=20.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 23:26:06] 2025-06-05 21:25:45,196 | INFO     | .. there are 18 such processes running
[2025-06-05 23:26:06] 2025-06-05 21:25:45,716 | INFO     | --- collectZombieJob: --- 10, [1176415]
[2025-06-05 23:26:06] 2025-06-05 21:25:45,716 | INFO     | zombie collector waiting for pid 1176415
[2025-06-05 23:26:06] 2025-06-05 21:25:45,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:26:06] 2025-06-05 21:25:45,716 | INFO     | collected zombie processes
[2025-06-05 23:26:06] 2025-06-05 21:25:45,716 | INFO     | will attempt to kill all subprocesses of pid=1176415
[2025-06-05 23:26:06] 2025-06-05 21:25:46,408 | INFO     | process IDs to be killed: [1176415] (in reverse order)
[2025-06-05 23:26:06] 2025-06-05 21:25:46,649 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:26:06] 2025-06-05 21:25:46,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:26:06] 2025-06-05 21:25:46,677 | INFO     | did not find any defunct processes belonging to 1176415
[2025-06-05 23:26:06] 2025-06-05 21:25:46,703 | INFO     | did not find any defunct processes belonging to 1176415
[2025-06-05 23:26:06] 2025-06-05 21:25:46,703 | INFO     | ready for new job
[2025-06-05 23:26:06] 2025-06-05 21:25:46,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:26:06] 2025-06-05 21:25:46,705 | INFO     | **************************************
[2025-06-05 23:26:06] 2025-06-05 21:25:46,705 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:26:06] 2025-06-05 21:25:46,705 | INFO     | **************************************
[2025-06-05 23:26:06] 2025-06-05 21:25:46,706 | INFO     | 
[2025-06-05 23:26:06] 2025-06-05 21:25:46,714 | INFO     | architecture information:
[2025-06-05 23:26:06] 2025-06-05 21:25:46,714 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:26:06] 2025-06-05 21:25:46,733 | INFO     | cat /etc/os-release:
[2025-06-05 23:26:06] NAME="CentOS Linux"
[2025-06-05 23:26:06] VERSION="7 (Core)"
[2025-06-05 23:26:06] ID="centos"
[2025-06-05 23:26:06] ID_LIKE="rhel fedora"
[2025-06-05 23:26:06] VERSION_ID="7"
[2025-06-05 23:26:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:26:06] ANSI_COLOR="0;31"
[2025-06-05 23:26:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:26:06] HOME_URL="https://www.centos.org/"
[2025-06-05 23:26:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:26:06] 
[2025-06-05 23:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:26:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:26:06] 
[2025-06-05 23:26:06] 2025-06-05 21:25:46,734 | INFO     | **************************************
[2025-06-05 23:26:06] 2025-06-05 21:25:47,237 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-06-05 23:26:06] 2025-06-05 21:25:47,262 | INFO     | sufficient remaining disk space (3302117867520 B)
[2025-06-05 23:26:06] 2025-06-05 21:25:47,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:26:06] 2025-06-05 21:25:47,263 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:26:06] 2025-06-05 21:25:47,263 | INFO     | update_server=False
[2025-06-05 23:26:06] 2025-06-05 21:25:47,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:26:06] 2025-06-05 21:25:47,263 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 23:26:06] 2025-06-05 21:25:47,265 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:26:06] 2025-06-05 21:25:47,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:26:06] 2025-06-05 21:25:47,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:26:06] 2025-06-05 21:25:47,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:26:06] 2025-06-05 21:25:47,435 | INFO     | aborting loop
[2025-06-05 23:26:06] 2025-06-05 21:25:47,892 | INFO     | all data control threads have been joined
[2025-06-05 23:26:06] 2025-06-05 21:25:48,138 | INFO     | all job control threads have been joined
[2025-06-05 23:26:06] 2025-06-05 21:25:48,268 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,270 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,319 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:26:06] 2025-06-05 21:25:48,440 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,561 | INFO     | all payload control threads have been joined
[2025-06-05 23:26:06] 2025-06-05 21:25:48,613 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,717 | INFO     | [job] validate thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,756 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,782 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:48,897 | INFO     | [data] control thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:49,145 | INFO     | [job] control thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:49,263 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:26:06] 2025-06-05 21:25:49,566 | INFO     | [payload] control thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:49,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:26:06] 2025-06-05 21:25:49,767 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:50,325 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:50,689 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:53,269 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:25:58,097 | INFO     | job.realtimelogging is not enabled
[2025-06-05 23:26:06] 2025-06-05 21:25:59,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:26:06] 2025-06-05 21:26:01,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22586692597568)>', '<ExcThread(monitor, started 22586454935296)>']
[2025-06-05 23:26:06] 2025-06-05 21:26:01,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:26:06] 2025-06-05 21:26:01,336 | INFO     | [monitor] control thread has ended
[2025-06-05 23:26:06] 2025-06-05 21:26:06,122 | INFO     | all workflow threads have been joined
[2025-06-05 23:26:06] 2025-06-05 21:26:06,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:26:06] 2025-06-05 21:26:06,123 | INFO     | traces error code: 0
[2025-06-05 23:26:06] 2025-06-05 21:26:06,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:26:06] 2025-06-05 21:26:06,246 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:26:06] 2025-06-05 21:26:06,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:26:06] 2025-06-05 21:26:06,253 [wrapper] pilotpid: 1166006
[2025-06-05 23:26:06] 2025-06-05 21:26:06,258 [wrapper] Pilot exit status: 0
[2025-06-05 23:26:06] 2025-06-05 21:26:06,273 [wrapper] pandaids: 6678213816
[2025-06-05 23:26:06] 2025-06-05 21:26:06,430 [wrapper] cleanup supervisor_pilot 1846648 1166007
[2025-06-05 23:26:06] 2025-06-05 21:26:06,433 [wrapper] Test setup, not cleaning
[2025-06-05 23:26:06] 2025-06-05 21:26:06,436 [wrapper] apfmon messages muted
[2025-06-05 23:26:06] 2025-06-05 21:26:06,439 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:26:06] 2025-06-05 21:26:06,442 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:26:06]  *** Error codes and diagnostics ***
[2025-06-05 23:26:06]     "exeErrorCode": 0,
[2025-06-05 23:26:06]     "exeErrorDiag": "",
[2025-06-05 23:26:06]     "pilotErrorCode": 0,
[2025-06-05 23:26:06]     "pilotErrorDiag": "",
[2025-06-05 23:26:06]  *** Listing of results directory ***
[2025-06-05 23:26:06] total 390604
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:53 pilot3.tar.gz
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:55 queuedata.json
[2025-06-05 23:26:06] -rwx------ 1 boinc boinc     37140 Jun  4 01:56 runpilot2-wrapper.sh
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc       100 Jun  5 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:26:06] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 20:54 run_atlas
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc       105 Jun  5 20:54 job.xml
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc      6684 Jun  5 20:54 init_data.xml
[2025-06-05 23:26:06] -rw-r--r-- 2 boinc boinc 214473911 Jun  5 20:54 EVNT.45006593._001952.pool.root.1
[2025-06-05 23:26:06] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:54 start_atlas.sh
[2025-06-05 23:26:06] drwxrwx--x 2 boinc boinc      4096 Jun  5 20:54 shared
[2025-06-05 23:26:06] -rw-r--r-- 2 boinc boinc    508882 Jun  5 20:54 input.tar.gz
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc         0 Jun  5 20:54 boinc_lockfile
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc      2524 Jun  5 20:54 pandaJob.out
[2025-06-05 23:26:06] -rw------- 1 boinc boinc    987543 Jun  5 20:54 agis_schedconf.cvmfs.json
[2025-06-05 23:26:06] -rw------- 1 boinc boinc   1598969 Jun  5 20:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:26:06] drwx------ 4 boinc boinc      4096 Jun  5 20:55 pilot3
[2025-06-05 23:26:06] -rw------- 1 boinc boinc 179450533 Jun  5 23:25 HITS.45006595._048656.pool.root.1
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc       529 Jun  5 23:25 boinc_task_state.xml
[2025-06-05 23:26:06] -rw------- 1 boinc boinc      1042 Jun  5 23:25 memory_monitor_summary.json
[2025-06-05 23:26:06] -rw------- 1 boinc boinc    274207 Jun  5 23:25 log.45006595._048656.job.log.tgz.1
[2025-06-05 23:26:06] -rw------- 1 boinc boinc        95 Jun  5 23:25 pilot_heartbeat.json
[2025-06-05 23:26:06] -rw------- 1 boinc boinc      7696 Jun  5 23:25 heartbeat.json
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc      8192 Jun  5 23:26 boinc_mmap_file
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc        27 Jun  5 23:26 wrapper_checkpoint.txt
[2025-06-05 23:26:06] -rw------- 1 boinc boinc      4559 Jun  5 23:26 pilotlog.txt
[2025-06-05 23:26:06] -rw------- 1 boinc boinc    837064 Jun  5 23:26 log.45006595._048656.job.log.1
[2025-06-05 23:26:06] -rw------- 1 boinc boinc       357 Jun  5 23:26 output.list
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc       620 Jun  5 23:26 runtime_log
[2025-06-05 23:26:06] -rw------- 1 boinc boinc   1126400 Jun  5 23:26 result.tar.gz
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc      9025 Jun  5 23:26 runtime_log.err
[2025-06-05 23:26:06] -rw------- 1 boinc boinc       663 Jun  5 23:26 ocKLDmKfqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2KaKDmRh9bVm.diag
[2025-06-05 23:26:06] -rw-r--r-- 1 boinc boinc     20966 Jun  5 23:26 stderr.txt
[2025-06-05 23:26:06] HITS file was successfully produced:
[2025-06-05 23:26:06] -rw------- 1 boinc boinc 179450533 Jun  5 23:25 shared/HITS.pool.root.1
[2025-06-05 23:26:06]  *** Contents of shared directory: ***
[2025-06-05 23:26:06] total 386320
[2025-06-05 23:26:06] -rw-r--r-- 2 boinc boinc 214473911 Jun  5 20:54 ATLAS.root_0
[2025-06-05 23:26:06] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:54 start_atlas.sh
[2025-06-05 23:26:06] -rw-r--r-- 2 boinc boinc    508882 Jun  5 20:54 input.tar.gz
[2025-06-05 23:26:06] -rw------- 1 boinc boinc 179450533 Jun  5 23:25 HITS.pool.root.1
[2025-06-05 23:26:06] -rw------- 1 boinc boinc   1126400 Jun  5 23:26 result.tar.gz
23:26:08 (1158187): run_atlas exited; CPU time 34728.404580
23:26:08 (1158187): called boinc_finish(0)

</stderr_txt>
]]>

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