Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:48:12 (40704): wrapper (7.7.26015): starting
02:48:12 (40704): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 02:48:12] Arguments: --nthreads 10
[2025-06-04 02:48:12] Threads: 10
[2025-06-04 02:48:12] Checking for CVMFS
[2025-06-04 02:48:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:48:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:48:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:48:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:48:13] 2.11.2.0 1570 108503 243308 146771 1 306 17047613 18432001 18406 130560 0 482650761 99.069 997386357 35409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 02:48:13] CVMFS is ok
[2025-06-04 02:48:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:48:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:48:13] Further information can be found at the LHC@home message board.
[2025-06-04 02:48:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:48:13] Checking for apptainer binary...
[2025-06-04 02:48:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:48:13] Running /usr/bin/apptainer --version
[2025-06-04 02:48:13] apptainer version 1.3.2-1.el7
[2025-06-04 02:48:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:48:14] c-210-9.aglt2.org
[2025-06-04 02:48:14] apptainer works
[2025-06-04 02:48:14] Set ATHENA_PROC_NUMBER=10
[2025-06-04 02:48:14] Set ATHENA_CORE_NUMBER=10
[2025-06-04 02:48:14] Starting ATLAS job with PandaID=6678246397
[2025-06-04 02:48:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:38:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:38:45] 2025-06-04 09:38:30,849 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:38:45] 2025-06-04 09:38:30,850 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678246397/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,851 | INFO     | extracted standard info from prmon json
[2025-06-04 05:38:45] 2025-06-04 09:38:30,851 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:38:45] 2025-06-04 09:38:30,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:38:45] 2025-06-04 09:38:30,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:38:45] 2025-06-04 09:38:30,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:38:45] 2025-06-04 09:38:30,855 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:38:45] 2025-06-04 09:38:30,856 | INFO     | sum of square deviations: 1444137943.1017933
[2025-06-04 05:38:45] 2025-06-04 09:38:30,857 | INFO     | sum of deviations: 13829437798.503008
[2025-06-04 05:38:45] 2025-06-04 09:38:30,857 | INFO     | mean x: 1749024830.1317365
[2025-06-04 05:38:45] 2025-06-04 09:38:30,857 | INFO     | mean y: 2524149.886227545
[2025-06-04 05:38:45] 2025-06-04 09:38:30,858 | INFO     | -- intersect: -16746589196.164255
[2025-06-04 05:38:45] 2025-06-04 09:38:30,858 | INFO     | intersect: -16746589196.164255
[2025-06-04 05:38:45] 2025-06-04 09:38:30,858 | INFO     | chi2: 2.72052003537115
[2025-06-04 05:38:45] 2025-06-04 09:38:30,858 | INFO     | sum of square deviations: 1318262581.77778
[2025-06-04 05:38:45] 2025-06-04 09:38:30,859 | INFO     | sum of deviations: 26044698275.740746
[2025-06-04 05:38:45] 2025-06-04 09:38:30,860 | INFO     | mean x: 1749024677.6296296
[2025-06-04 05:38:45] 2025-06-04 09:38:30,860 | INFO     | mean y: 2538573.845679012
[2025-06-04 05:38:45] 2025-06-04 09:38:30,860 | INFO     | -- intersect: -34552655994.64226
[2025-06-04 05:38:45] 2025-06-04 09:38:30,860 | INFO     | intersect: -34552655994.64226
[2025-06-04 05:38:45] 2025-06-04 09:38:30,860 | INFO     | chi2: 1.7353105396276478
[2025-06-04 05:38:45] 2025-06-04 09:38:30,861 | INFO     | current chi2=1.7353105396276478 (change=36.21401360527359 %)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,861 | INFO     | sum of square deviations: 1199931884.191077
[2025-06-04 05:38:45] 2025-06-04 09:38:30,862 | INFO     | sum of deviations: 25237903403.547764
[2025-06-04 05:38:45] 2025-06-04 09:38:30,862 | INFO     | mean x: 1749024525.133758
[2025-06-04 05:38:45] 2025-06-04 09:38:30,862 | INFO     | mean y: 2537533.7834394905
[2025-06-04 05:38:45] 2025-06-04 09:38:30,862 | INFO     | -- intersect: -36784310617.617676
[2025-06-04 05:38:45] 2025-06-04 09:38:30,862 | INFO     | intersect: -36784310617.617676
[2025-06-04 05:38:45] 2025-06-04 09:38:30,863 | INFO     | chi2: 1.7370627755236279
[2025-06-04 05:38:45] 2025-06-04 09:38:30,863 | INFO     | current chi2=1.7370627755236279 (change=-0.10097535028837218 %)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,863 | INFO     | right removable region: 156
[2025-06-04 05:38:45] 2025-06-04 09:38:30,863 | INFO     | sum of square deviations: 1318259105.5123413
[2025-06-04 05:38:45] 2025-06-04 09:38:30,864 | INFO     | sum of deviations: -16234903647.41975
[2025-06-04 05:38:45] 2025-06-04 09:38:30,865 | INFO     | mean x: 1749024982.6358025
[2025-06-04 05:38:45] 2025-06-04 09:38:30,865 | INFO     | mean y: 2560188.3827160494
[2025-06-04 05:38:45] 2025-06-04 09:38:30,865 | INFO     | -- intersect: 21542522970.575256
[2025-06-04 05:38:45] 2025-06-04 09:38:30,865 | INFO     | intersect: 21542522970.575256
[2025-06-04 05:38:45] 2025-06-04 09:38:30,865 | INFO     | chi2: 1.0839479322924455
[2025-06-04 05:38:45] 2025-06-04 09:38:30,865 | INFO     | current chi2=1.0839479322924455 (change=60.15659071797401 %)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,866 | INFO     | sum of square deviations: 1199915292.917195
[2025-06-04 05:38:45] 2025-06-04 09:38:30,867 | INFO     | sum of deviations: -18449696741.43949
[2025-06-04 05:38:45] 2025-06-04 09:38:30,867 | INFO     | mean x: 1749025135.1401274
[2025-06-04 05:38:45] 2025-06-04 09:38:30,867 | INFO     | mean y: 2562956.974522293
[2025-06-04 05:38:45] 2025-06-04 09:38:30,867 | INFO     | -- intersect: 26895280740.443443
[2025-06-04 05:38:45] 2025-06-04 09:38:30,867 | INFO     | intersect: 26895280740.443443
[2025-06-04 05:38:45] 2025-06-04 09:38:30,868 | INFO     | chi2: 1.0513952570601885
[2025-06-04 05:38:45] 2025-06-04 09:38:30,868 | INFO     | current chi2=1.0513952570601885 (change=3.0031585708559945 %)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,868 | INFO     | left removable region: 20
[2025-06-04 05:38:45] 2025-06-04 09:38:30,868 | INFO     | sum of square deviations: 779951759.6176479
[2025-06-04 05:38:45] 2025-06-04 09:38:30,869 | INFO     | sum of deviations: -1730387788.1029408
[2025-06-04 05:38:45] 2025-06-04 09:38:30,869 | INFO     | mean x: 1749025104.6323528
[2025-06-04 05:38:45] 2025-06-04 09:38:30,869 | INFO     | mean y: 2573224.4779411764
[2025-06-04 05:38:45] 2025-06-04 09:38:30,869 | INFO     | -- intersect: 3882930752.7755303
[2025-06-04 05:38:45] 2025-06-04 09:38:30,869 | INFO     | intersect: 3882930752.7755303
[2025-06-04 05:38:45] 2025-06-04 09:38:30,870 | INFO     | chi2: 0.016674734751183206
[2025-06-04 05:38:45] 2025-06-04 09:38:30,870 | INFO     | -- intersect: 3882930752.7755303
[2025-06-04 05:38:45] 2025-06-04 09:38:30,870 | INFO     | current memory leak: -2.22 B/s (using 136 data points, chi2=0.02)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | ..............................
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . Timing measurements:
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . get job = 0 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . initial setup = 3 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . payload setup = 17 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . stage-in = 0 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . payload execution = 10141 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . stage-out = 1 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,871 | INFO     | . log creation = 0 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,872 | INFO     | ..............................
[2025-06-04 05:38:45] 2025-06-04 09:38:30,984 | INFO     | 
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | job summary report
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | --------------------------------------------------
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | PanDA job id: 6678246397
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | task id: 45006595
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | errors: (none)
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | pilot state: finished 
[2025-06-04 05:38:45] 2025-06-04 09:38:30,985 | INFO     | transexitcode: 0
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | exeerrorcode: 0
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | exeerrordiag: 
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | exitcode: 0
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | exitmsg: OK
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | cpuconsumptiontime: 44714 s
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | nevents: 400
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | neventsw: 0
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | pid: 13835
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | pgrp: 13835
[2025-06-04 05:38:45] 2025-06-04 09:38:30,986 | INFO     | corecount: 10
[2025-06-04 05:38:45] 2025-06-04 09:38:30,987 | INFO     | event service: False
[2025-06-04 05:38:45] 2025-06-04 09:38:30,987 | INFO     | sizes: {0: 2405013, 1: 2405212, 9: 2405418, 12: 2405446, 10162: 2434261, 10163: 2434260, 10165: 2443413, 10167: 2443469, 10177: 2443639}
[2025-06-04 05:38:45] 2025-06-04 09:38:30,987 | INFO     | --------------------------------------------------
[2025-06-04 05:38:45] 2025-06-04 09:38:30,987 | INFO     | 
[2025-06-04 05:38:45] 2025-06-04 09:38:30,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 05:38:45] 2025-06-04 09:38:31,009 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:38:45] 2025-06-04 09:38:31,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:38:45] 2025-06-04 09:38:31,012 | INFO     | job 6678246397 has completed (purged errors)
[2025-06-04 05:38:45] 2025-06-04 09:38:31,012 | INFO     | overall cleanup function is called
[2025-06-04 05:38:45] 2025-06-04 09:38:32,020 | INFO     | --- collectZombieJob: --- 10, [13835]
[2025-06-04 05:38:45] 2025-06-04 09:38:32,020 | INFO     | zombie collector waiting for pid 13835
[2025-06-04 05:38:45] 2025-06-04 09:38:32,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:38:45] 2025-06-04 09:38:32,020 | INFO     | collected zombie processes
[2025-06-04 05:38:45] 2025-06-04 09:38:32,020 | INFO     | will attempt to kill all subprocesses of pid=13835
[2025-06-04 05:38:45] 2025-06-04 09:38:32,376 | INFO     | process IDs to be killed: [13835] (in reverse order)
[2025-06-04 05:38:45] 2025-06-04 09:38:32,514 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:38:45] 2025-06-04 09:38:32,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:38:45] 2025-06-04 09:38:32,523 | INFO     | did not find any defunct processes belonging to 13835
[2025-06-04 05:38:45] 2025-06-04 09:38:32,530 | INFO     | did not find any defunct processes belonging to 13835
[2025-06-04 05:38:45] 2025-06-04 09:38:32,530 | INFO     | ready for new job
[2025-06-04 05:38:45] 2025-06-04 09:38:32,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:38:45] 2025-06-04 09:38:32,532 | INFO     | **************************************
[2025-06-04 05:38:45] 2025-06-04 09:38:32,532 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:38:45] 2025-06-04 09:38:32,532 | INFO     | **************************************
[2025-06-04 05:38:45] 2025-06-04 09:38:32,532 | INFO     | 
[2025-06-04 05:38:45] 2025-06-04 09:38:32,534 | INFO     | architecture information:
[2025-06-04 05:38:45] 2025-06-04 09:38:32,534 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:38:45] 2025-06-04 09:38:32,553 | INFO     | cat /etc/os-release:
[2025-06-04 05:38:45] NAME="CentOS Linux"
[2025-06-04 05:38:45] VERSION="7 (Core)"
[2025-06-04 05:38:45] ID="centos"
[2025-06-04 05:38:45] ID_LIKE="rhel fedora"
[2025-06-04 05:38:45] VERSION_ID="7"
[2025-06-04 05:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:38:45] ANSI_COLOR="0;31"
[2025-06-04 05:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:38:45] HOME_URL="https://www.centos.org/"
[2025-06-04 05:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:38:45] 
[2025-06-04 05:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:38:45] 
[2025-06-04 05:38:45] 2025-06-04 09:38:32,553 | INFO     | **************************************
[2025-06-04 05:38:45] 2025-06-04 09:38:33,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 05:38:45] 2025-06-04 09:38:33,095 | INFO     | sufficient remaining disk space (57024708608 B)
[2025-06-04 05:38:45] 2025-06-04 09:38:33,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:38:45] 2025-06-04 09:38:33,096 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:38:45] 2025-06-04 09:38:33,096 | INFO     | update_server=False
[2025-06-04 05:38:45] 2025-06-04 09:38:33,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:38:45] 2025-06-04 09:38:33,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:38:45] 2025-06-04 09:38:33,164 | INFO     | all data control threads have been joined
[2025-06-04 05:38:45] 2025-06-04 09:38:33,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:38:45] 2025-06-04 09:38:33,455 | INFO     | aborting loop
[2025-06-04 05:38:45] 2025-06-04 09:38:33,546 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:38:45] 2025-06-04 09:38:33,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:38:45] 2025-06-04 09:38:33,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:38:45] 2025-06-04 09:38:34,097 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,170 | INFO     | [data] control thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,174 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,188 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,196 | INFO     | [job] validate thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,288 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,429 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,461 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,507 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:34,588 | INFO     | all payload control threads have been joined
[2025-06-04 05:38:45] 2025-06-04 09:38:34,589 | INFO     | all job control threads have been joined
[2025-06-04 05:38:45] 2025-06-04 09:38:35,102 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:35,168 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:35,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:35,592 | INFO     | [payload] control thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:35,593 | INFO     | [job] control thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:35,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:38:45] 2025-06-04 09:38:36,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:38:45] 2025-06-04 09:38:36,999 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:40,018 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:38:45] 2025-06-04 09:38:40,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977005463360)>', '<ExcThread(monitor, started 139976046003968)>']
[2025-06-04 05:38:45] 2025-06-04 09:38:40,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:38:45] 2025-06-04 09:38:40,584 | INFO     | [monitor] control thread has ended
[2025-06-04 05:38:45] 2025-06-04 09:38:45,286 | INFO     | all workflow threads have been joined
[2025-06-04 05:38:45] 2025-06-04 09:38:45,287 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:38:45] 2025-06-04 09:38:45,287 | INFO     | traces error code: 0
[2025-06-04 05:38:45] 2025-06-04 09:38:45,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:38:45] 2025-06-04 09:38:45,500 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:38:45] 2025-06-04 09:38:45,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:38:45] 2025-06-04 09:38:45,508 [wrapper] pilotpid: 4368
[2025-06-04 05:38:45] 2025-06-04 09:38:45,512 [wrapper] Pilot exit status: 0
[2025-06-04 05:38:45] 2025-06-04 09:38:45,529 [wrapper] pandaids: 6678246397
[2025-06-04 05:38:45] 2025-06-04 09:38:45,614 [wrapper] cleanup supervisor_pilot 38410 4369
[2025-06-04 05:38:45] 2025-06-04 09:38:45,618 [wrapper] Test setup, not cleaning
[2025-06-04 05:38:45] 2025-06-04 09:38:45,624 [wrapper] apfmon messages muted
[2025-06-04 05:38:45] 2025-06-04 09:38:45,627 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:38:45] 2025-06-04 09:38:45,630 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:38:45]  *** Error codes and diagnostics ***
[2025-06-04 05:38:45]     "exeErrorCode": 0,
[2025-06-04 05:38:45]     "exeErrorDiag": "",
[2025-06-04 05:38:45]     "pilotErrorCode": 0,
[2025-06-04 05:38:45]     "pilotErrorDiag": "",
[2025-06-04 05:38:45]  *** Listing of results directory ***
[2025-06-04 05:38:45] total 383952
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 21:59 pilot3.tar.gz
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 22:05 queuedata.json
[2025-06-04 05:38:45] -rwx------ 1 boincer umatlas     37140 Jun  3 22:05 runpilot2-wrapper.sh
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 02:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:38:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 02:48 run_atlas
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 02:48 job.xml
[2025-06-04 05:38:45] -rw-r--r-- 2 boincer umatlas 213358598 Jun  4 02:48 EVNT.45006593._002009.pool.root.1
[2025-06-04 05:38:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:48 start_atlas.sh
[2025-06-04 05:38:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 02:48 shared
[2025-06-04 05:38:45] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 02:48 input.tar.gz
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 02:48 boinc_lockfile
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 02:48 pandaJob.out
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas    986745 Jun  4 02:48 agis_schedconf.cvmfs.json
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas   1603667 Jun  4 02:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:38:45] drwx------ 4 boincer umatlas      4096 Jun  4 02:48 pilot3
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas      6226 Jun  4 05:27 init_data.xml
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas       530 Jun  4 05:37 boinc_task_state.xml
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas        95 Jun  4 05:37 pilot_heartbeat.json
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas 173433588 Jun  4 05:37 HITS.45006595._050104.pool.root.1
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas      1062 Jun  4 05:38 memory_monitor_summary.json
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas    383239 Jun  4 05:38 log.45006595._050104.job.log.tgz.1
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas      7752 Jun  4 05:38 heartbeat.json
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:38 boinc_mmap_file
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:38 wrapper_checkpoint.txt
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas      4353 Jun  4 05:38 pilotlog.txt
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas    885545 Jun  4 05:38 log.45006595._050104.job.log.1
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas       357 Jun  4 05:38 output.list
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:38 runtime_log
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas   1290240 Jun  4 05:38 result.tar.gz
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas       660 Jun  4 05:38 Y4gKDmUgsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsomKDmZHVyVo.diag
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas      8657 Jun  4 05:38 runtime_log.err
[2025-06-04 05:38:45] -rw-r--r-- 1 boincer umatlas     20903 Jun  4 05:38 stderr.txt
[2025-06-04 05:38:45] HITS file was successfully produced:
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas 173433588 Jun  4 05:37 shared/HITS.pool.root.1
[2025-06-04 05:38:45]  *** Contents of shared directory: ***
[2025-06-04 05:38:45] total 379512
[2025-06-04 05:38:45] -rw-r--r-- 2 boincer umatlas 213358598 Jun  4 02:48 ATLAS.root_0
[2025-06-04 05:38:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:48 start_atlas.sh
[2025-06-04 05:38:45] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 02:48 input.tar.gz
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas 173433588 Jun  4 05:37 HITS.pool.root.1
[2025-06-04 05:38:45] -rw------- 1 boincer umatlas   1290240 Jun  4 05:38 result.tar.gz
05:38:47 (40704): run_atlas exited; CPU time 44804.279877
05:38:47 (40704): called boinc_finish(0)

</stderr_txt>
]]>

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