Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:38:33 (27992): wrapper (7.7.26015): starting
17:38:33 (27992): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:38:33] Arguments: --nthreads 8
[2025-06-04 17:38:33] Threads: 8
[2025-06-04 17:38:33] Checking for CVMFS
[2025-06-04 17:38:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:38:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:38:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:38:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:38:34] 2.11.2.0 20118 33411 90924 146786 3 16 17604681 25165825 3138 130560 0 16960714 99.806 19397286 2024 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 17:38:34] CVMFS is ok
[2025-06-04 17:38:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:38:35] Checking for apptainer binary...
[2025-06-04 17:38:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:38:35] Running /usr/bin/apptainer --version
[2025-06-04 17:38:35] apptainer version 1.3.2-1.el7
[2025-06-04 17:38:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:09:10] cg-vwn344.simple-grid.lan
[2025-06-04 18:09:10] apptainer works
[2025-06-04 18:09:10] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:09:10] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:09:10] Starting ATLAS job with PandaID=6678247751
[2025-06-04 18:09:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:14:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:14:44] 2025-06-04 19:54:11,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:14:44] 2025-06-04 19:54:11,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:14:44] 2025-06-04 19:54:11,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:14:44] 2025-06-04 19:54:11,131 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:14:44] 2025-06-04 19:54:11,132 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,134 | INFO     | sum of deviations: 49633139159.00003
[2025-06-04 22:14:44] 2025-06-04 19:54:11,134 | INFO     | mean x: 1749060394.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,134 | INFO     | mean y: 2437352.7942583733
[2025-06-04 22:14:44] 2025-06-04 19:54:11,134 | INFO     | -- intersect: -30664415537.486305
[2025-06-04 22:14:44] 2025-06-04 19:54:11,134 | INFO     | intersect: -30664415537.486305
[2025-06-04 22:14:44] 2025-06-04 19:54:11,135 | INFO     | chi2: 7.959510397926488
[2025-06-04 22:14:44] 2025-06-04 19:54:11,135 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,137 | INFO     | sum of deviations: 62335026785.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,137 | INFO     | mean x: 1749060241.5
[2025-06-04 22:14:44] 2025-06-04 19:54:11,137 | INFO     | mean y: 2446914.431372549
[2025-06-04 22:14:44] 2025-06-04 19:54:11,137 | INFO     | -- intersect: -41414533045.0538
[2025-06-04 22:14:44] 2025-06-04 19:54:11,137 | INFO     | intersect: -41414533045.0538
[2025-06-04 22:14:44] 2025-06-04 19:54:11,138 | INFO     | chi2: 7.278749295950607
[2025-06-04 22:14:44] 2025-06-04 19:54:11,138 | INFO     | current chi2=7.278749295950607 (change=8.552801214421741 %)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,138 | INFO     | right removable region: 203
[2025-06-04 22:14:44] 2025-06-04 19:54:11,138 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,140 | INFO     | sum of deviations: -25337964700.50001
[2025-06-04 22:14:44] 2025-06-04 19:54:11,140 | INFO     | mean x: 1749060546.5
[2025-06-04 22:14:44] 2025-06-04 19:54:11,140 | INFO     | mean y: 2494969.475490196
[2025-06-04 22:14:44] 2025-06-04 19:54:11,140 | INFO     | -- intersect: 16837687209.495659
[2025-06-04 22:14:44] 2025-06-04 19:54:11,140 | INFO     | intersect: 16837687209.495659
[2025-06-04 22:14:44] 2025-06-04 19:54:11,141 | INFO     | chi2: 2.5958044369830375
[2025-06-04 22:14:44] 2025-06-04 19:54:11,141 | INFO     | current chi2=2.5958044369830375 (change=67.38738556508119 %)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,141 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,143 | INFO     | sum of deviations: -62501936449.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,143 | INFO     | mean x: 1749060699.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,143 | INFO     | mean y: 2524775.3065326633
[2025-06-04 22:14:44] 2025-06-04 19:54:11,143 | INFO     | -- intersect: 44740020309.766075
[2025-06-04 22:14:44] 2025-06-04 19:54:11,143 | INFO     | intersect: 44740020309.766075
[2025-06-04 22:14:44] 2025-06-04 19:54:11,144 | INFO     | chi2: 1.0145331848372892
[2025-06-04 22:14:44] 2025-06-04 19:54:11,144 | INFO     | current chi2=1.0145331848372892 (change=60.91642458179839 %)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,144 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 22:14:44] 2025-06-04 19:54:11,146 | INFO     | sum of deviations: -61916721206.499985
[2025-06-04 22:14:44] 2025-06-04 19:54:11,146 | INFO     | mean x: 1749060851.5
[2025-06-04 22:14:44] 2025-06-04 19:54:11,146 | INFO     | mean y: 2524213.881443299
[2025-06-04 22:14:44] 2025-06-04 19:54:11,146 | INFO     | -- intersect: 47836975363.59453
[2025-06-04 22:14:44] 2025-06-04 19:54:11,146 | INFO     | intersect: 47836975363.59453
[2025-06-04 22:14:44] 2025-06-04 19:54:11,147 | INFO     | chi2: 0.9794477614177663
[2025-06-04 22:14:44] 2025-06-04 19:54:11,147 | INFO     | current chi2=0.9794477614177663 (change=3.4582824834014483 %)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,147 | INFO     | left removable region: 30
[2025-06-04 22:14:44] 2025-06-04 19:54:11,147 | INFO     | sum of square deviations: 1605470102.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,149 | INFO     | sum of deviations: -29224119547.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,149 | INFO     | mean x: 1749061126.0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,149 | INFO     | mean y: 2518891.682080925
[2025-06-04 22:14:44] 2025-06-04 19:54:11,149 | INFO     | -- intersect: 31840403245.653336
[2025-06-04 22:14:44] 2025-06-04 19:54:11,149 | INFO     | intersect: 31840403245.653336
[2025-06-04 22:14:44] 2025-06-04 19:54:11,149 | INFO     | chi2: 0.16166535124044204
[2025-06-04 22:14:44] 2025-06-04 19:54:11,150 | INFO     | -- intersect: 31840403245.653336
[2025-06-04 22:14:44] 2025-06-04 19:54:11,150 | INFO     | current memory leak: -18.20 B/s (using 173 data points, chi2=0.16)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | ..............................
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . Timing measurements:
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . get job = 0 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . initial setup = 3 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . payload setup = 171 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . stage-in = 0 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . payload execution = 12866 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . stage-out = 3 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | . log creation = 1 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,151 | INFO     | ..............................
[2025-06-04 22:14:44] 2025-06-04 19:54:11,275 | INFO     | 
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | job summary report
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | --------------------------------------------------
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | PanDA job id: 6678247751
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | task id: 45006595
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | errors: (none)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | pilot state: finished 
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | transexitcode: 0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,276 | INFO     | exeerrorcode: 0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | exeerrordiag: 
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | exitcode: 0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | exitmsg: OK
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | cpuconsumptiontime: 47961 s
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | nevents: 400
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | neventsw: 0
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | pid: 30930
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | pgrp: 30930
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | corecount: 8
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | event service: False
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397398, 33: 2397426, 44: 2397482, 55: 2397638, 66: 2397666, 76: 2397694, 87: 2397750, 92: 2397984, 98: 2398292, 1
[2025-06-04 22:14:44] 2025-06-04 19:54:11,277 | INFO     | --------------------------------------------------
[2025-06-04 22:14:44] 2025-06-04 19:54:11,278 | INFO     | 
[2025-06-04 22:14:44] 2025-06-04 19:54:11,278 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 22:14:44] 2025-06-04 19:54:11,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:14:44] 2025-06-04 19:54:11,578 | INFO     | job 6678247751 has completed (purged errors)
[2025-06-04 22:14:44] 2025-06-04 19:54:11,579 | INFO     | overall cleanup function is called
[2025-06-04 22:14:44] 2025-06-04 19:54:12,588 | INFO     | --- collectZombieJob: --- 10, [30930]
[2025-06-04 22:14:44] 2025-06-04 19:54:12,588 | INFO     | zombie collector waiting for pid 30930
[2025-06-04 22:14:44] 2025-06-04 19:54:12,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:14:44] 2025-06-04 19:54:12,588 | INFO     | collected zombie processes
[2025-06-04 22:14:44] 2025-06-04 19:54:12,588 | INFO     | will attempt to kill all subprocesses of pid=30930
[2025-06-04 22:14:44] 2025-06-04 19:54:12,701 | INFO     | process IDs to be killed: [30930] (in reverse order)
[2025-06-04 22:14:44] 2025-06-04 19:54:13,436 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:14:44] 2025-06-04 19:54:13,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:14:44] 2025-06-04 19:54:13,440 | INFO     | did not find any defunct processes belonging to 30930
[2025-06-04 22:14:44] 2025-06-04 19:54:13,444 | INFO     | did not find any defunct processes belonging to 30930
[2025-06-04 22:14:44] 2025-06-04 19:54:13,445 | INFO     | ready for new job
[2025-06-04 22:14:44] 2025-06-04 19:54:13,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:14:44] 2025-06-04 19:54:13,447 | INFO     | **************************************
[2025-06-04 22:14:44] 2025-06-04 19:54:13,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:14:44] 2025-06-04 19:54:13,447 | INFO     | **************************************
[2025-06-04 22:14:44] 2025-06-04 19:54:13,447 | INFO     | 
[2025-06-04 22:14:44] 2025-06-04 19:54:13,448 | INFO     | pilot is running in a VM
[2025-06-04 22:14:44] 2025-06-04 19:54:13,448 | INFO     | architecture information:
[2025-06-04 22:14:44] 2025-06-04 19:54:13,448 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:14:44] 2025-06-04 19:54:13,733 | INFO     | cat /etc/os-release:
[2025-06-04 22:14:44] NAME="CentOS Linux"
[2025-06-04 22:14:44] VERSION="7 (Core)"
[2025-06-04 22:14:44] ID="centos"
[2025-06-04 22:14:44] ID_LIKE="rhel fedora"
[2025-06-04 22:14:44] VERSION_ID="7"
[2025-06-04 22:14:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:14:44] ANSI_COLOR="0;31"
[2025-06-04 22:14:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:14:44] HOME_URL="https://www.centos.org/"
[2025-06-04 22:14:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:14:44] 
[2025-06-04 22:14:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:14:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:14:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:14:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:14:44] 
[2025-06-04 22:14:44] 2025-06-04 19:54:13,734 | INFO     | **************************************
[2025-06-04 22:14:44] 2025-06-04 19:54:14,237 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 22:14:44] 2025-06-04 19:54:14,429 | INFO     | sufficient remaining disk space (496896049152 B)
[2025-06-04 22:14:44] 2025-06-04 19:54:14,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:14:44] 2025-06-04 19:54:14,430 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:14:44] 2025-06-04 19:54:14,430 | INFO     | update_server=False
[2025-06-04 22:14:44] 2025-06-04 19:54:14,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:14:44] 2025-06-04 19:54:14,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:14:44] 2025-06-04 19:54:14,432 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:14:44] 2025-06-04 19:54:14,432 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:14:44] 2025-06-04 19:54:14,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:14:44] 2025-06-04 19:54:14,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:14:44] 2025-06-04 19:54:14,466 | INFO     | all job control threads have been joined
[2025-06-04 22:14:44] 2025-06-04 19:54:14,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 22:14:44] 2025-06-04 19:54:14,707 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 22:14:44] 2025-06-04 19:54:14,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:14:44] 2025-06-04 19:54:14,707 | INFO     | will abort loop
[2025-06-04 22:14:44] 2025-06-04 19:54:15,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:14:44] 2025-06-04 19:54:15,221 | INFO     | all payload control threads have been joined
[2025-06-04 22:14:44] 2025-06-04 19:54:15,241 | INFO     | all data control threads have been joined
[2025-06-04 22:14:44] 2025-06-04 19:54:15,436 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:15,472 | INFO     | [job] control thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:15,556 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:15,556 | INFO     | [job] validate thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:15,648 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:15,713 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,110 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,128 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,227 | INFO     | [payload] control thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,247 | INFO     | [data] control thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,267 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:14:44] 2025-06-04 19:54:16,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:16,941 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:17,206 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:17,297 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:18,440 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:14:44] 2025-06-04 19:54:19,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312493504320)>', '<ExcThread(monitor, started 140312060086016)>']
[2025-06-04 22:14:44] 2025-06-04 19:54:20,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:14:44] 2025-06-04 19:54:20,467 | INFO     | [monitor] control thread has ended
[2025-06-04 22:14:44] 2025-06-04 19:54:24,705 | INFO     | all workflow threads have been joined
[2025-06-04 22:14:44] 2025-06-04 19:54:24,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:14:44] 2025-06-04 19:54:24,705 | INFO     | traces error code: 0
[2025-06-04 22:14:44] 2025-06-04 19:54:24,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:14:44] 2025-06-04 19:54:25,053 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:14:44] 2025-06-04 19:54:25,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:14:44] 2025-06-04 19:54:25,244 [wrapper] pilotpid: 22286
[2025-06-04 22:14:44] 2025-06-04 19:54:25,336 [wrapper] Pilot exit status: 0
[2025-06-04 22:14:44] 2025-06-04 19:54:25,717 [wrapper] pandaids: 6678247751
[2025-06-04 22:14:44] 2025-06-04 19:54:26,431 [wrapper] cleanup supervisor_pilot 23568 22287
[2025-06-04 22:14:44] 2025-06-04 19:54:26,502 [wrapper] Test setup, not cleaning
[2025-06-04 22:14:44] 2025-06-04 19:54:26,587 [wrapper] apfmon messages muted
[2025-06-04 22:14:44] 2025-06-04 19:54:26,665 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:14:44] 2025-06-04 19:54:26,788 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:14:44]  *** Error codes and diagnostics ***
[2025-06-04 22:14:44]     "exeErrorCode": 0,
[2025-06-04 22:14:44]     "exeErrorDiag": "",
[2025-06-04 22:14:44]     "pilotErrorCode": 0,
[2025-06-04 22:14:44]     "pilotErrorDiag": "",
[2025-06-04 22:14:44]  *** Listing of results directory ***
[2025-06-04 22:14:44] total 387712
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:13 queuedata.json
[2025-06-04 22:14:44] -rwx------. 1 boinc boinc     37140 Jun  4 04:14 runpilot2-wrapper.sh
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc       100 Jun  4 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:14:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 17:38 run_atlas
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc       105 Jun  4 17:38 job.xml
[2025-06-04 22:14:44] -rw-r--r--. 2 boinc boinc 215110687 Jun  4 17:38 EVNT.45006593._002022.pool.root.1
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc      6391 Jun  4 17:38 init_data.xml
[2025-06-04 22:14:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:38 start_atlas.sh
[2025-06-04 22:14:44] drwxrwx--x. 2 boinc boinc        68 Jun  4 17:38 shared
[2025-06-04 22:14:44] -rw-r--r--. 2 boinc boinc    508884 Jun  4 17:38 input.tar.gz
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc         0 Jun  4 17:38 boinc_lockfile
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc      2525 Jun  4 18:09 pandaJob.out
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc    990989 Jun  4 18:12 agis_schedconf.cvmfs.json
[2025-06-04 22:14:44] drwx------. 4 boinc boinc      4096 Jun  4 18:12 pilot3
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc 175070363 Jun  4 21:51 HITS.45006595._050428.pool.root.1
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:51 boinc_task_state.xml
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc      1014 Jun  4 21:52 memory_monitor_summary.json
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc   1598969 Jun  4 21:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc    369471 Jun  4 21:52 log.45006595._050428.job.log.tgz.1
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc      7694 Jun  4 21:54 heartbeat.json
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc        95 Jun  4 21:54 pilot_heartbeat.json
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc      4725 Jun  4 21:54 pilotlog.txt
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc   1135538 Jun  4 21:54 log.45006595._050428.job.log.1
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc       357 Jun  4 21:54 output.list
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:54 runtime_log
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc   1525760 Jun  4 21:54 result.tar.gz
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc      8659 Jun  4 21:54 runtime_log.err
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc       657 Jun  4 21:54 9fJODmapsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBrmKDmtzyCVo.diag
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc      8192 Jun  4 22:14 boinc_mmap_file
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc        28 Jun  4 22:14 wrapper_checkpoint.txt
[2025-06-04 22:14:44] -rw-r--r--. 1 boinc boinc     20532 Jun  4 22:14 stderr.txt
[2025-06-04 22:14:44] HITS file was successfully produced:
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc 175070363 Jun  4 21:51 shared/HITS.pool.root.1
[2025-06-04 22:14:44]  *** Contents of shared directory: ***
[2025-06-04 22:14:44] total 383048
[2025-06-04 22:14:44] -rw-r--r--. 2 boinc boinc 215110687 Jun  4 17:38 ATLAS.root_0
[2025-06-04 22:14:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:38 start_atlas.sh
[2025-06-04 22:14:44] -rw-r--r--. 2 boinc boinc    508884 Jun  4 17:38 input.tar.gz
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc 175070363 Jun  4 21:51 HITS.pool.root.1
[2025-06-04 22:14:44] -rw-------. 1 boinc boinc   1525760 Jun  4 21:54 result.tar.gz
22:14:46 (27992): run_atlas exited; CPU time 48144.966832
22:14:46 (27992): called boinc_finish(0)

</stderr_txt>
]]>

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