Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:45:28 (8025): wrapper (7.7.26015): starting
02:45:28 (8025): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 02:45:28] Arguments: --nthreads 12
[2025-06-04 02:45:28] Threads: 12
[2025-06-04 02:45:28] Checking for CVMFS
[2025-06-04 02:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:45:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:45:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:45:28] 2.11.2.0 2933 35339 87068 146771 1 58 18251471 20275201 1 130560 0 15598126 99.983 6144930 7546 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 02:45:28] CVMFS is ok
[2025-06-04 02:45:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:45:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:45:28] Further information can be found at the LHC@home message board.
[2025-06-04 02:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:45:28] Checking for apptainer binary...
[2025-06-04 02:45:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:45:28] Running /usr/bin/apptainer --version
[2025-06-04 02:45:28] apptainer version 1.3.2-1.el7
[2025-06-04 02:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:45:30] c-205-15.aglt2.org
[2025-06-04 02:45:30] apptainer works
[2025-06-04 02:45:30] Set ATHENA_PROC_NUMBER=12
[2025-06-04 02:45:30] Set ATHENA_CORE_NUMBER=12
[2025-06-04 02:45:30] Starting ATLAS job with PandaID=6678247767
[2025-06-04 02:45:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:48:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:48:19]  is_tar=False
[2025-06-04 03:48:19]  lfn=log.45006595._050444.job.log.tgz.1
[2025-06-04 03:48:19]  mtime=0
[2025-06-04 03:48:19]  protocol_id=None
[2025-06-04 03:48:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:48:19]  replicas=None
[2025-06-04 03:48:19]  scope=mc23_13p6TeV
[2025-06-04 03:48:19]  status=None
[2025-06-04 03:48:19]  status_code=0
[2025-06-04 03:48:19]  storage_token=
[2025-06-04 03:48:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678247767/log.45006595._050444.job.log.tgz.1
[2025-06-04 03:48:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/6a/log.45006595._050444.job.log.tgz.1
[2025-06-04 03:48:19]  workdir=None
[2025-06-04 03:48:19] ]
[2025-06-04 03:48:19] 2025-06-04 07:47:52,451 | INFO     | transferring file log.45006595._050444.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678247767/log.45006595._050444.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 03:48:19] 2025-06-04 07:47:52,452 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678247767/log.45006595._050444.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._050444.job
[2025-06-04 03:48:19] 2025-06-04 07:47:52,472 | INFO     | adding to output.list: log.45006595._050444.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/6a/log.45006595._050444.job.log.tg
[2025-06-04 03:48:19] 2025-06-04 07:47:52,473 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:48:19] 2025-06-04 07:47:52,473 | INFO     | summary of transferred files:
[2025-06-04 03:48:19] 2025-06-04 07:47:52,473 | INFO     |  -- lfn=log.45006595._050444.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:48:19] 2025-06-04 07:47:52,474 | INFO     | stage-out finished correctly
[2025-06-04 03:48:19] 2025-06-04 07:47:54,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:48:19] 2025-06-04 07:47:55,199 | WARNING  | process 18179 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 03:48:19] 2025-06-04 07:47:55,199 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678247767/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:48:19] 2025-06-04 07:47:55,288 | INFO     | number of running child processes to parent process 18179: 1
[2025-06-04 03:48:19] 2025-06-04 07:47:55,288 | INFO     | maximum number of monitored processes: 6
[2025-06-04 03:48:19] 2025-06-04 07:47:55,870 | INFO     | job 6678247767 has state=finished
[2025-06-04 03:48:19] 2025-06-04 07:47:55,870 | INFO     | preparing for final server update for job 6678247767 in state='finished'
[2025-06-04 03:48:19] 2025-06-04 07:47:55,870 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:48:19] 2025-06-04 07:47:55,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:48:19] 2025-06-04 07:47:55,871 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:48:19] 2025-06-04 07:47:55,871 | INFO     | job 6678247767 has finished - writing final server update
[2025-06-04 03:48:19] 2025-06-04 07:47:55,871 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:48:19] 2025-06-04 07:47:55,873 | INFO     | executing command: lscpu
[2025-06-04 03:48:19] 2025-06-04 07:47:55,899 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:48:19] 2025-06-04 07:47:57,791 | INFO     | monitor loop #281: job 0:6678247767 is in state 'finished'
[2025-06-04 03:48:19] 2025-06-04 07:47:57,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,294 | INFO     | monitor loop #282: job 0:6678247767 is in state 'finished'
[2025-06-04 03:48:19] 2025-06-04 07:48:00,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,439 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 03:48:19] 2025-06-04 07:48:00,439 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678247767/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,440 | INFO     | extracted standard info from prmon json
[2025-06-04 03:48:19] 2025-06-04 07:48:00,440 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:48:19] 2025-06-04 07:48:00,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:48:19] 2025-06-04 07:48:00,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:48:19] 2025-06-04 07:48:00,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:48:19] 2025-06-04 07:48:00,443 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:48:19] 2025-06-04 07:48:00,444 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 03:48:19] 2025-06-04 07:48:00,444 | INFO     | sum of deviations: -4928836112.0
[2025-06-04 03:48:19] 2025-06-04 07:48:00,444 | INFO     | mean x: 1749021495.5
[2025-06-04 03:48:19] 2025-06-04 07:48:00,445 | INFO     | mean y: 2799041.1481481483
[2025-06-04 03:48:19] 2025-06-04 07:48:00,445 | INFO     | -- intersect: 176618285495.07852
[2025-06-04 03:48:19] 2025-06-04 07:48:00,445 | INFO     | intersect: 176618285495.07852
[2025-06-04 03:48:19] 2025-06-04 07:48:00,445 | INFO     | chi2: 0.07541295957980781
[2025-06-04 03:48:19] 2025-06-04 07:48:00,445 | INFO     | -- intersect: 176618285495.07852
[2025-06-04 03:48:19] 2025-06-04 07:48:00,445 | INFO     | current memory leak: -100.98 B/s (using 54 data points, chi2=0.08)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | ..............................
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . Timing measurements:
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . get job = 0 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . initial setup = 2 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . payload setup = 9 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . stage-in = 0 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . payload execution = 3701 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . stage-out = 0 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,446 | INFO     | . log creation = 0 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,447 | INFO     | ..............................
[2025-06-04 03:48:19] 2025-06-04 07:48:00,565 | INFO     | 
[2025-06-04 03:48:19] 2025-06-04 07:48:00,566 | INFO     | job summary report
[2025-06-04 03:48:19] 2025-06-04 07:48:00,566 | INFO     | --------------------------------------------------
[2025-06-04 03:48:19] 2025-06-04 07:48:00,566 | INFO     | PanDA job id: 6678247767
[2025-06-04 03:48:19] 2025-06-04 07:48:00,566 | INFO     | task id: 45006595
[2025-06-04 03:48:19] 2025-06-04 07:48:00,566 | INFO     | errors: (none)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | pilot state: finished 
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | transexitcode: 0
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | exeerrorcode: 0
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | exeerrordiag: 
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | exitcode: 0
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | exitmsg: OK
[2025-06-04 03:48:19] 2025-06-04 07:48:00,567 | INFO     | cpuconsumptiontime: 39800 s
[2025-06-04 03:48:19] 2025-06-04 07:48:00,568 | INFO     | nevents: 400
[2025-06-04 03:48:19] 2025-06-04 07:48:00,568 | INFO     | neventsw: 0
[2025-06-04 03:48:19] 2025-06-04 07:48:00,568 | INFO     | pid: 18179
[2025-06-04 03:48:19] 2025-06-04 07:48:00,568 | INFO     | pgrp: 18179
[2025-06-04 03:48:19] 2025-06-04 07:48:00,568 | INFO     | corecount: 12
[2025-06-04 03:48:19] 2025-06-04 07:48:00,568 | INFO     | event service: False
[2025-06-04 03:48:19] 2025-06-04 07:48:00,569 | INFO     | sizes: {0: 2405183, 5: 2405389, 11: 2405445, 3711: 2431042, 3712: 2431041, 3714: 2440038, 3716: 2440222, 3722: 2440392}
[2025-06-04 03:48:19] 2025-06-04 07:48:00,569 | INFO     | --------------------------------------------------
[2025-06-04 03:48:19] 2025-06-04 07:48:00,569 | INFO     | 
[2025-06-04 03:48:19] 2025-06-04 07:48:00,569 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 03:48:19] 2025-06-04 07:48:00,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:48:19] 2025-06-04 07:48:00,596 | INFO     | job 6678247767 has completed (purged errors)
[2025-06-04 03:48:19] 2025-06-04 07:48:00,596 | INFO     | overall cleanup function is called
[2025-06-04 03:48:19] 2025-06-04 07:48:01,604 | INFO     | --- collectZombieJob: --- 10, [18179]
[2025-06-04 03:48:19] 2025-06-04 07:48:01,604 | INFO     | zombie collector waiting for pid 18179
[2025-06-04 03:48:19] 2025-06-04 07:48:01,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:48:19] 2025-06-04 07:48:01,604 | INFO     | collected zombie processes
[2025-06-04 03:48:19] 2025-06-04 07:48:01,605 | INFO     | will attempt to kill all subprocesses of pid=18179
[2025-06-04 03:48:19] 2025-06-04 07:48:01,697 | INFO     | process IDs to be killed: [18179] (in reverse order)
[2025-06-04 03:48:19] 2025-06-04 07:48:01,745 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:48:19] 2025-06-04 07:48:01,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:48:19] 2025-06-04 07:48:01,749 | INFO     | did not find any defunct processes belonging to 18179
[2025-06-04 03:48:19] 2025-06-04 07:48:01,752 | INFO     | did not find any defunct processes belonging to 18179
[2025-06-04 03:48:19] 2025-06-04 07:48:01,753 | INFO     | ready for new job
[2025-06-04 03:48:19] 2025-06-04 07:48:01,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:48:19] 2025-06-04 07:48:01,754 | INFO     | **************************************
[2025-06-04 03:48:19] 2025-06-04 07:48:01,754 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:48:19] 2025-06-04 07:48:01,755 | INFO     | **************************************
[2025-06-04 03:48:19] 2025-06-04 07:48:01,755 | INFO     | 
[2025-06-04 03:48:19] 2025-06-04 07:48:01,755 | INFO     | architecture information:
[2025-06-04 03:48:19] 2025-06-04 07:48:01,756 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:48:19] 2025-06-04 07:48:01,771 | INFO     | cat /etc/os-release:
[2025-06-04 03:48:19] NAME="CentOS Linux"
[2025-06-04 03:48:19] VERSION="7 (Core)"
[2025-06-04 03:48:19] ID="centos"
[2025-06-04 03:48:19] ID_LIKE="rhel fedora"
[2025-06-04 03:48:19] VERSION_ID="7"
[2025-06-04 03:48:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:48:19] ANSI_COLOR="0;31"
[2025-06-04 03:48:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:48:19] HOME_URL="https://www.centos.org/"
[2025-06-04 03:48:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:48:19] 
[2025-06-04 03:48:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:48:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:48:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:48:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:48:19] 
[2025-06-04 03:48:19] 2025-06-04 07:48:01,771 | INFO     | **************************************
[2025-06-04 03:48:19] 2025-06-04 07:48:02,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 03:48:19] 2025-06-04 07:48:02,291 | INFO     | sufficient remaining disk space (29423042560 B)
[2025-06-04 03:48:19] 2025-06-04 07:48:02,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:48:19] 2025-06-04 07:48:02,292 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:48:19] 2025-06-04 07:48:02,292 | INFO     | update_server=False
[2025-06-04 03:48:19] 2025-06-04 07:48:02,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:48:19] 2025-06-04 07:48:02,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:48:19] 2025-06-04 07:48:02,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:48:19] 2025-06-04 07:48:02,293 | INFO     | aborting loop
[2025-06-04 03:48:19] 2025-06-04 07:48:02,293 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:48:19] 2025-06-04 07:48:02,294 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:48:19] 2025-06-04 07:48:02,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:48:19] 2025-06-04 07:48:02,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:48:19] 2025-06-04 07:48:02,667 | INFO     | all data control threads have been joined
[2025-06-04 03:48:19] 2025-06-04 07:48:02,807 | INFO     | all payload control threads have been joined
[2025-06-04 03:48:19] 2025-06-04 07:48:03,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:48:19] 2025-06-04 07:48:03,296 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,298 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,299 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,380 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,623 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,668 | INFO     | [data] control thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:03,751 | INFO     | all job control threads have been joined
[2025-06-04 03:48:19] 2025-06-04 07:48:03,813 | INFO     | [payload] control thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:04,269 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:04,347 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:04,447 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:04,706 | INFO     | [job] validate thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:04,756 | INFO     | [job] control thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:05,088 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:05,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:48:19] 2025-06-04 07:48:09,586 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:12,814 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:48:19] 2025-06-04 07:48:13,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:48:19] 2025-06-04 07:48:14,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551812794176)>', '<ExcThread(monitor, started 140550774707968)>']
[2025-06-04 03:48:19] 2025-06-04 07:48:14,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:48:19] 2025-06-04 07:48:14,343 | INFO     | [monitor] control thread has ended
[2025-06-04 03:48:19] 2025-06-04 07:48:19,324 | INFO     | all workflow threads have been joined
[2025-06-04 03:48:19] 2025-06-04 07:48:19,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:48:19] 2025-06-04 07:48:19,324 | INFO     | traces error code: 0
[2025-06-04 03:48:19] 2025-06-04 07:48:19,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:48:19] 2025-06-04 07:48:19,415 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:48:19] 2025-06-04 07:48:19,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:48:19] 2025-06-04 07:48:19,422 [wrapper] pilotpid: 11680
[2025-06-04 03:48:19] 2025-06-04 07:48:19,426 [wrapper] Pilot exit status: 0
[2025-06-04 03:48:19] 2025-06-04 07:48:19,442 [wrapper] pandaids: 6678247767
[2025-06-04 03:48:19] 2025-06-04 07:48:19,480 [wrapper] cleanup supervisor_pilot 26217 11681
[2025-06-04 03:48:19] 2025-06-04 07:48:19,484 [wrapper] Test setup, not cleaning
[2025-06-04 03:48:19] 2025-06-04 07:48:19,488 [wrapper] apfmon messages muted
[2025-06-04 03:48:19] 2025-06-04 07:48:19,492 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:48:19] 2025-06-04 07:48:19,496 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:48:19]  *** Error codes and diagnostics ***
[2025-06-04 03:48:19]     "exeErrorCode": 0,
[2025-06-04 03:48:19]     "exeErrorDiag": "",
[2025-06-04 03:48:19]     "pilotErrorCode": 0,
[2025-06-04 03:48:19]     "pilotErrorDiag": "",
[2025-06-04 03:48:19]  *** Listing of results directory ***
[2025-06-04 03:48:19] total 385764
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 21:59 pilot3.tar.gz
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 22:11 queuedata.json
[2025-06-04 03:48:19] -rwx------ 1 boincer umatlas     37140 Jun  3 22:12 runpilot2-wrapper.sh
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas       100 Jun  4 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:48:19] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 02:45 run_atlas
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas       105 Jun  4 02:45 job.xml
[2025-06-04 03:48:19] -rw-r--r-- 2 boincer umatlas 215110687 Jun  4 02:45 EVNT.45006593._002022.pool.root.1
[2025-06-04 03:48:19] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:45 start_atlas.sh
[2025-06-04 03:48:19] drwxrwx--x 2 boincer umatlas      4096 Jun  4 02:45 shared
[2025-06-04 03:48:19] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 02:45 input.tar.gz
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas         0 Jun  4 02:45 boinc_lockfile
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 02:45 pandaJob.out
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas    986745 Jun  4 02:45 agis_schedconf.cvmfs.json
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas   1603667 Jun  4 02:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:48:19] drwx------ 4 boincer umatlas      4096 Jun  4 02:45 pilot3
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 03:45 init_data.xml
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas 174605935 Jun  4 03:47 HITS.45006595._050444.pool.root.1
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas        95 Jun  4 03:47 pilot_heartbeat.json
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas       529 Jun  4 03:47 boinc_task_state.xml
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas      1048 Jun  4 03:47 memory_monitor_summary.json
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas    368274 Jun  4 03:47 log.45006595._050444.job.log.tgz.1
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas      7755 Jun  4 03:48 heartbeat.json
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 03:48 boinc_mmap_file
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas        27 Jun  4 03:48 wrapper_checkpoint.txt
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas      4548 Jun  4 03:48 pilotlog.txt
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas    369256 Jun  4 03:48 log.45006595._050444.job.log.1
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas       357 Jun  4 03:48 output.list
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas       620 Jun  4 03:48 runtime_log
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas    757760 Jun  4 03:48 result.tar.gz
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas       659 Jun  4 03:48 XicNDmTnsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfpmKDmgaFzym.diag
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 03:48 runtime_log.err
[2025-06-04 03:48:19] -rw-r--r-- 1 boincer umatlas     21486 Jun  4 03:48 stderr.txt
[2025-06-04 03:48:19] HITS file was successfully produced:
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas 174605935 Jun  4 03:47 shared/HITS.pool.root.1
[2025-06-04 03:48:19]  *** Contents of shared directory: ***
[2025-06-04 03:48:19] total 381844
[2025-06-04 03:48:19] -rw-r--r-- 2 boincer umatlas 215110687 Jun  4 02:45 ATLAS.root_0
[2025-06-04 03:48:19] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:45 start_atlas.sh
[2025-06-04 03:48:19] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 02:45 input.tar.gz
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas 174605935 Jun  4 03:47 HITS.pool.root.1
[2025-06-04 03:48:19] -rw------- 1 boincer umatlas    757760 Jun  4 03:48 result.tar.gz
03:48:20 (8025): run_atlas exited; CPU time 39780.690431
03:48:20 (8025): called boinc_finish(0)

</stderr_txt>
]]>

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