Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:03:23 (1553278): wrapper (7.7.26015): starting
18:03:23 (1553278): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 18:03:23] Arguments: --nthreads 2
[2025-06-04 18:03:23] Threads: 2
[2025-06-04 18:03:23] Checking for CVMFS
[2025-06-04 18:03:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:03:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:03:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:03:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:03:23] 2.9.2.0 873760 2829 58652 146786 3 56 32765507 36864000 0 130560 0 1822152 99.990 678742 50573 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 18:03:23] CVMFS is ok
[2025-06-04 18:03:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:03:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:03:23] Further information can be found at the LHC@home message board.
[2025-06-04 18:03:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:03:23] Checking for apptainer binary...
[2025-06-04 18:03:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:03:23] Running /usr/bin/apptainer --version
[2025-06-04 18:03:23] apptainer version 1.3.6-6.1
[2025-06-04 18:03:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:03:24] itA173
[2025-06-04 18:03:24] apptainer works
[2025-06-04 18:03:24] Set ATHENA_PROC_NUMBER=2
[2025-06-04 18:03:24] Set ATHENA_CORE_NUMBER=2
[2025-06-04 18:03:24] Starting ATLAS job with PandaID=6678245650
[2025-06-04 18:03:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:56:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:56:08] 2025-06-04 17:55:49,110 | INFO     | extracted standard info from prmon json
[2025-06-04 19:56:08] 2025-06-04 17:55:49,110 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:56:08] 2025-06-04 17:55:49,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:56:08] 2025-06-04 17:55:49,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:56:08] 2025-06-04 17:55:49,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | sum of square deviations: 412686807.5
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | sum of deviations: 11061580820.499996
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | mean x: 1749056372.5
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | mean y: 2265769.1
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | -- intersect: -46879117576.35452
[2025-06-04 19:56:08] 2025-06-04 17:55:49,111 | INFO     | intersect: -46879117576.35452
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | chi2: 1.4344255042989884
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | sum of deviations: 10326850491.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | mean x: 1749056220.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | mean y: 2263685.3523809523
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | -- intersect: -50320528612.944176
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | intersect: -50320528612.944176
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | chi2: 1.437434374106829
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | current chi2=1.437434374106829 (change=-0.20976131551083882 %)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | right removable region: 104
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | sum of deviations: -328661777.9999995
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | mean x: 1749056525.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | mean y: 2296992.561904762
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | -- intersect: 1603867702.740665
[2025-06-04 19:56:08] 2025-06-04 17:55:49,112 | INFO     | intersect: 1603867702.740665
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | chi2: 0.05744090745476242
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | current chi2=0.05744090745476242 (change=95.99554614146142 %)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | sum of deviations: 1726316744.4999998
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | mean x: 1749056677.5
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | mean y: 2290811.09
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | -- intersect: -9736148755.353458
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | intersect: -9736148755.353458
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | chi2: 0.0012034858438024739
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | current chi2=0.0012034858438024739 (change=97.90482794034847 %)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | sum of deviations: 1292064302.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | mean x: 1749056830.0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | mean y: 2292309.694736842
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | -- intersect: -8499038821.310316
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | intersect: -8499038821.310316
[2025-06-04 19:56:08] 2025-06-04 17:55:49,113 | INFO     | chi2: 0.0010224507964702377
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | current chi2=0.0010224507964702377 (change=15.042557273482076 %)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | left removable region: 30
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | sum of deviations: 263655145.5
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | mean x: 1749057104.5
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | mean y: 2294702.878378378
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | -- intersect: -3668380628.03368
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | intersect: -3668380628.03368
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | chi2: 0.0006203298556257986
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | -- intersect: -3668380628.03368
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | current memory leak: 2.10 B/s (using 74 data points, chi2=0.00)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | ..............................
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . Timing measurements:
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . get job = 0 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . initial setup = 1 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . payload setup = 8 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . stage-in = 0 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . payload execution = 6688 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . stage-out = 0 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | . log creation = 0 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,114 | INFO     | ..............................
[2025-06-04 19:56:08] 2025-06-04 17:55:49,517 | INFO     | 
[2025-06-04 19:56:08] 2025-06-04 17:55:49,517 | INFO     | job summary report
[2025-06-04 19:56:08] 2025-06-04 17:55:49,517 | INFO     | --------------------------------------------------
[2025-06-04 19:56:08] 2025-06-04 17:55:49,517 | INFO     | PanDA job id: 6678245650
[2025-06-04 19:56:08] 2025-06-04 17:55:49,517 | INFO     | task id: 45006595
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | errors: (none)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | pilot state: finished 
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | transexitcode: 0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | exeerrorcode: 0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | exeerrordiag: 
[2025-06-04 19:56:08] 2025-06-04 17:55:49,518 | INFO     | exitcode: 0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | exitmsg: OK
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | cpuconsumptiontime: 13038 s
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | nevents: 400
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | neventsw: 0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | pid: 1563359
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | pgrp: 1563359
[2025-06-04 19:56:08] 2025-06-04 17:55:49,519 | INFO     | corecount: 2
[2025-06-04 19:56:08] 2025-06-04 17:55:49,520 | INFO     | event service: False
[2025-06-04 19:56:08] 2025-06-04 17:55:49,520 | INFO     | sizes: {0: 2397343, 6: 2397549, 10: 2397577, 6700: 2424669, 6701: 2433616, 6702: 2433672, 6712: 2433970}
[2025-06-04 19:56:08] 2025-06-04 17:55:49,520 | INFO     | --------------------------------------------------
[2025-06-04 19:56:08] 2025-06-04 17:55:49,520 | INFO     | 
[2025-06-04 19:56:08] 2025-06-04 17:55:49,520 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 19:56:08] 2025-06-04 17:55:49,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | job 6678245650 has completed (purged errors)
[2025-06-04 19:56:08] 2025-06-04 17:55:49,533 | INFO     | overall cleanup function is called
[2025-06-04 19:56:08] 2025-06-04 17:55:50,539 | INFO     | --- collectZombieJob: --- 10, [1563359]
[2025-06-04 19:56:08] 2025-06-04 17:55:50,540 | INFO     | zombie collector waiting for pid 1563359
[2025-06-04 19:56:08] 2025-06-04 17:55:50,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:56:08] 2025-06-04 17:55:50,540 | INFO     | collected zombie processes
[2025-06-04 19:56:08] 2025-06-04 17:55:50,540 | INFO     | will attempt to kill all subprocesses of pid=1563359
[2025-06-04 19:56:08] 2025-06-04 17:55:50,580 | INFO     | process IDs to be killed: [1563359] (in reverse order)
[2025-06-04 19:56:08] 2025-06-04 17:55:50,602 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:56:08] 2025-06-04 17:55:50,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:56:08] 2025-06-04 17:55:50,603 | INFO     | did not find any defunct processes belonging to 1563359
[2025-06-04 19:56:08] 2025-06-04 17:55:50,604 | INFO     | did not find any defunct processes belonging to 1563359
[2025-06-04 19:56:08] 2025-06-04 17:55:50,604 | INFO     | ready for new job
[2025-06-04 19:56:08] 2025-06-04 17:55:50,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:56:08] 2025-06-04 17:55:50,605 | INFO     | **************************************
[2025-06-04 19:56:08] 2025-06-04 17:55:50,605 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:56:08] 2025-06-04 17:55:50,605 | INFO     | **************************************
[2025-06-04 19:56:08] 2025-06-04 17:55:50,605 | INFO     | 
[2025-06-04 19:56:08] 2025-06-04 17:55:50,605 | INFO     | architecture information:
[2025-06-04 19:56:08] 2025-06-04 17:55:50,605 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:56:08] 2025-06-04 17:55:50,614 | INFO     | cat /etc/os-release:
[2025-06-04 19:56:08] NAME="CentOS Linux"
[2025-06-04 19:56:08] VERSION="7 (Core)"
[2025-06-04 19:56:08] ID="centos"
[2025-06-04 19:56:08] ID_LIKE="rhel fedora"
[2025-06-04 19:56:08] VERSION_ID="7"
[2025-06-04 19:56:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:56:08] ANSI_COLOR="0;31"
[2025-06-04 19:56:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:56:08] HOME_URL="https://www.centos.org/"
[2025-06-04 19:56:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:56:08] 
[2025-06-04 19:56:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:56:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:56:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:56:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:56:08] 
[2025-06-04 19:56:08] 2025-06-04 17:55:50,614 | INFO     | **************************************
[2025-06-04 19:56:08] 2025-06-04 17:55:51,118 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | INFO     | sufficient remaining disk space (223400165376 B)
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | INFO     | update_server=False
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:56:08] 2025-06-04 17:55:51,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:56:08] 2025-06-04 17:55:51,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:56:08] 2025-06-04 17:55:51,628 | INFO     | aborting loop
[2025-06-04 19:56:08] 2025-06-04 17:55:52,043 | INFO     | all data control threads have been joined
[2025-06-04 19:56:08] 2025-06-04 17:55:52,136 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:52,136 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:52,198 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:52,240 | INFO     | all job control threads have been joined
[2025-06-04 19:56:08] 2025-06-04 17:55:52,264 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:52,461 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:52,471 | INFO     | all payload control threads have been joined
[2025-06-04 19:56:08] 2025-06-04 17:55:52,634 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:52,813 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,034 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,049 | INFO     | [data] control thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,136 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,241 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,244 | INFO     | [job] control thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,473 | INFO     | [payload] control thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,550 | INFO     | [job] validate thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:55:53,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:56:08] 2025-06-04 17:55:57,561 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:56:01,837 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:56:08] 2025-06-04 17:56:02,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:56:08] 2025-06-04 17:56:03,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967510603584)>', '<ExcThread(monitor, started 139966701086464)>']
[2025-06-04 19:56:08] 2025-06-04 17:56:04,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:56:08] 2025-06-04 17:56:04,200 | INFO     | [monitor] control thread has ended
[2025-06-04 19:56:08] 2025-06-04 17:56:08,756 | INFO     | all workflow threads have been joined
[2025-06-04 19:56:08] 2025-06-04 17:56:08,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:56:08] 2025-06-04 17:56:08,757 | INFO     | traces error code: 0
[2025-06-04 19:56:08] 2025-06-04 17:56:08,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:56:08] 2025-06-04 17:56:08,800 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:56:08] 2025-06-04 17:56:08,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:56:08] 2025-06-04 17:56:08,806 [wrapper] pilotpid: 1556898
[2025-06-04 19:56:08] 2025-06-04 17:56:08,809 [wrapper] Pilot exit status: 0
[2025-06-04 19:56:08] 2025-06-04 17:56:08,815 [wrapper] pandaids: 6678245650
[2025-06-04 19:56:08] 2025-06-04 17:56:08,829 [wrapper] cleanup supervisor_pilot 1577556 1556899
[2025-06-04 19:56:08] 2025-06-04 17:56:08,831 [wrapper] Test setup, not cleaning
[2025-06-04 19:56:08] 2025-06-04 17:56:08,833 [wrapper] apfmon messages muted
[2025-06-04 19:56:08] 2025-06-04 17:56:08,835 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:56:08] 2025-06-04 17:56:08,836 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:56:08]  *** Error codes and diagnostics ***
[2025-06-04 19:56:08]     "exeErrorCode": 0,
[2025-06-04 19:56:08]     "exeErrorDiag": "",
[2025-06-04 19:56:08]     "pilotErrorCode": 0,
[2025-06-04 19:56:08]     "pilotErrorDiag": "",
[2025-06-04 19:56:08]  *** Listing of results directory ***
[2025-06-04 19:56:08] total 389268
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-04 19:56:08] -rwx------ 1 boinc boinc     37140 Jun  4 03:48 runpilot2-wrapper.sh
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:48 queuedata.json
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:56:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:03 run_atlas
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:03 job.xml
[2025-06-04 19:56:08] -rw-r--r-- 2 boinc boinc 214722786 Jun  4 18:03 EVNT.45006593._001999.pool.root.1
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc      6689 Jun  4 18:03 init_data.xml
[2025-06-04 19:56:08] drwxrwx--x 2 boinc boinc      4096 Jun  4 18:03 shared
[2025-06-04 19:56:08] -rw-r--r-- 2 boinc boinc    508884 Jun  4 18:03 input.tar.gz
[2025-06-04 19:56:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:03 start_atlas.sh
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:03 boinc_lockfile
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc      2524 Jun  4 18:03 pandaJob.out
[2025-06-04 19:56:08] -rw------- 1 boinc boinc    990989 Jun  4 18:03 agis_schedconf.cvmfs.json
[2025-06-04 19:56:08] -rw------- 1 boinc boinc   1598969 Jun  4 18:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:56:08] drwx------ 4 boinc boinc      4096 Jun  4 18:03 pilot3
[2025-06-04 19:56:08] -rw------- 1 boinc boinc        95 Jun  4 19:55 pilot_heartbeat.json
[2025-06-04 19:56:08] -rw------- 1 boinc boinc 178334927 Jun  4 19:55 HITS.45006595._049849.pool.root.1
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:55 boinc_task_state.xml
[2025-06-04 19:56:08] -rw------- 1 boinc boinc      1018 Jun  4 19:55 memory_monitor_summary.json
[2025-06-04 19:56:08] -rw------- 1 boinc boinc    219930 Jun  4 19:55 log.45006595._049849.job.log.tgz.1
[2025-06-04 19:56:08] -rw------- 1 boinc boinc      7647 Jun  4 19:55 heartbeat.json
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:56 boinc_mmap_file
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc        27 Jun  4 19:56 wrapper_checkpoint.txt
[2025-06-04 19:56:08] -rw------- 1 boinc boinc      4552 Jun  4 19:56 pilotlog.txt
[2025-06-04 19:56:08] -rw------- 1 boinc boinc    638938 Jun  4 19:56 log.45006595._049849.job.log.1
[2025-06-04 19:56:08] -rw------- 1 boinc boinc       357 Jun  4 19:56 output.list
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:56 runtime_log
[2025-06-04 19:56:08] -rw------- 1 boinc boinc    880640 Jun  4 19:56 result.tar.gz
[2025-06-04 19:56:08] -rw------- 1 boinc boinc       659 Jun  4 19:56 HypNDmjPsg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRSaKDmOC56gm.diag
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc      8733 Jun  4 19:56 runtime_log.err
[2025-06-04 19:56:08] -rw-r--r-- 1 boinc boinc     20748 Jun  4 19:56 stderr.txt
[2025-06-04 19:56:08] HITS file was successfully produced:
[2025-06-04 19:56:08] -rw------- 1 boinc boinc 178334927 Jun  4 19:55 shared/HITS.pool.root.1
[2025-06-04 19:56:08]  *** Contents of shared directory: ***
[2025-06-04 19:56:08] total 385232
[2025-06-04 19:56:08] -rw-r--r-- 2 boinc boinc 214722786 Jun  4 18:03 ATLAS.root_0
[2025-06-04 19:56:08] -rw-r--r-- 2 boinc boinc    508884 Jun  4 18:03 input.tar.gz
[2025-06-04 19:56:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:03 start_atlas.sh
[2025-06-04 19:56:08] -rw------- 1 boinc boinc 178334927 Jun  4 19:55 HITS.pool.root.1
[2025-06-04 19:56:08] -rw------- 1 boinc boinc    880640 Jun  4 19:56 result.tar.gz
19:56:10 (1553278): run_atlas exited; CPU time 13069.047147
19:56:10 (1553278): called boinc_finish(0)

</stderr_txt>
]]>

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