Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:43:55 (232112): wrapper (7.7.26015): starting
00:43:55 (232112): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 00:43:55] Arguments: --nthreads 4
[2025-06-06 00:43:55] Threads: 4
[2025-06-06 00:43:55] Checking for CVMFS
[2025-06-06 00:43:55] No cvmfs_config command found, will try listing directly
[2025-06-06 00:43:55] CVMFS is ok
[2025-06-06 00:43:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:43:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:43:55] Further information can be found at the LHC@home message board.
[2025-06-06 00:43:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:43:55] Checking for apptainer binary...
[2025-06-06 00:43:55] which: no apptainer in ((null))
[2025-06-06 00:43:55] apptainer is not installed, using version from CVMFS
[2025-06-06 00:43:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:43:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-06-06 00:43:56] apptainer works
[2025-06-06 00:43:56] Set ATHENA_PROC_NUMBER=4
[2025-06-06 00:43:56] Set ATHENA_CORE_NUMBER=4
[2025-06-06 00:43:56] Starting ATLAS job with PandaID=6678246874
[2025-06-06 00:43:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:46:41]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:46:41] 2025-06-06 01:45:12,851 | INFO     | log transfer has been attempted: DONE
[2025-06-06 03:46:41] 2025-06-06 01:45:12,851 | INFO     | job 6678246874 has finished - writing final server update
[2025-06-06 03:46:41] 2025-06-06 01:45:12,852 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4748/.job.ad'
[2025-06-06 03:46:41] 2025-06-06 01:45:12,852 | INFO     | total number of processed events: 400 (read)
[2025-06-06 03:46:41] 2025-06-06 01:45:12,854 | INFO     | executing command: lscpu
[2025-06-06 03:46:41] 2025-06-06 01:45:12,900 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:46:41] 2025-06-06 01:45:14,787 | INFO     | monitor loop #801: job 0:6678246874 is in state 'finished'
[2025-06-06 03:46:41] 2025-06-06 01:45:14,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,577 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 03:46:41] 2025-06-06 01:45:16,578 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6678246874/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,579 | INFO     | extracted standard info from prmon json
[2025-06-06 03:46:41] 2025-06-06 01:45:16,579 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:46:41] 2025-06-06 01:45:16,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:46:41] 2025-06-06 01:45:16,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:46:41] 2025-06-06 01:45:16,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:46:41] 2025-06-06 01:45:16,584 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:46:41] 2025-06-06 01:45:16,585 | INFO     | sum of square deviations: 1748737904.5
[2025-06-06 03:46:41] 2025-06-06 01:45:16,586 | INFO     | sum of deviations: -11191879870.5
[2025-06-06 03:46:41] 2025-06-06 01:45:16,586 | INFO     | mean x: 1749168869.5
[2025-06-06 03:46:41] 2025-06-06 01:45:16,587 | INFO     | mean y: 2371329.5898876404
[2025-06-06 03:46:41] 2025-06-06 01:45:16,587 | INFO     | -- intersect: 11197009365.562243
[2025-06-06 03:46:41] 2025-06-06 01:45:16,587 | INFO     | intersect: 11197009365.562243
[2025-06-06 03:46:41] 2025-06-06 01:45:16,587 | INFO     | chi2: 1.8387721034528952
[2025-06-06 03:46:41] 2025-06-06 01:45:16,588 | INFO     | sum of square deviations: 1605470102.0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,589 | INFO     | sum of deviations: -10893284474.000006
[2025-06-06 03:46:41] 2025-06-06 01:45:16,589 | INFO     | mean x: 1749168717.0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,589 | INFO     | mean y: 2371647.50867052
[2025-06-06 03:46:41] 2025-06-06 01:45:16,589 | INFO     | -- intersect: 11870666425.197786
[2025-06-06 03:46:41] 2025-06-06 01:45:16,589 | INFO     | intersect: 11870666425.197786
[2025-06-06 03:46:41] 2025-06-06 01:45:16,590 | INFO     | chi2: 1.8363342959196105
[2025-06-06 03:46:41] 2025-06-06 01:45:16,590 | INFO     | current chi2=1.8363342959196105 (change=0.13257801381187634 %)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,590 | INFO     | right removable region: 172
[2025-06-06 03:46:41] 2025-06-06 01:45:16,590 | INFO     | sum of square deviations: 1605470102.0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,592 | INFO     | sum of deviations: -37244000241.00001
[2025-06-06 03:46:41] 2025-06-06 01:45:16,592 | INFO     | mean x: 1749169022.0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,592 | INFO     | mean y: 2398707.50867052
[2025-06-06 03:46:41] 2025-06-06 01:45:16,592 | INFO     | -- intersect: 40579953777.36804
[2025-06-06 03:46:41] 2025-06-06 01:45:16,592 | INFO     | intersect: 40579953777.36804
[2025-06-06 03:46:41] 2025-06-06 01:45:16,592 | INFO     | chi2: 0.3062499995577972
[2025-06-06 03:46:41] 2025-06-06 01:45:16,593 | INFO     | current chi2=0.3062499995577972 (change=83.34486372820685 %)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,593 | INFO     | sum of square deviations: 1470248962.0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,594 | INFO     | sum of deviations: -31549705629.00001
[2025-06-06 03:46:41] 2025-06-06 01:45:16,594 | INFO     | mean x: 1749169174.5
[2025-06-06 03:46:41] 2025-06-06 01:45:16,594 | INFO     | mean y: 2392254.273809524
[2025-06-06 03:46:41] 2025-06-06 01:45:16,594 | INFO     | -- intersect: 37537377129.029976
[2025-06-06 03:46:41] 2025-06-06 01:45:16,595 | INFO     | intersect: 37537377129.029976
[2025-06-06 03:46:41] 2025-06-06 01:45:16,595 | INFO     | chi2: 0.29478802171154356
[2025-06-06 03:46:41] 2025-06-06 01:45:16,595 | INFO     | current chi2=0.29478802171154356 (change=3.7426866490788244 %)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,595 | INFO     | left removable region: 20
[2025-06-06 03:46:41] 2025-06-06 01:45:16,595 | INFO     | sum of square deviations: 1088905998.0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,596 | INFO     | sum of deviations: -13984334698.5
[2025-06-06 03:46:41] 2025-06-06 01:45:16,597 | INFO     | mean x: 1749169296.5
[2025-06-06 03:46:41] 2025-06-06 01:45:16,597 | INFO     | mean y: 2371334.835526316
[2025-06-06 03:46:41] 2025-06-06 01:45:16,597 | INFO     | -- intersect: 22466173473.42544
[2025-06-06 03:46:41] 2025-06-06 01:45:16,597 | INFO     | intersect: 22466173473.42544
[2025-06-06 03:46:41] 2025-06-06 01:45:16,597 | INFO     | chi2: 0.183583896455858
[2025-06-06 03:46:41] 2025-06-06 01:45:16,598 | INFO     | -- intersect: 22466173473.42544
[2025-06-06 03:46:41] 2025-06-06 01:45:16,598 | INFO     | current memory leak: -12.84 B/s (using 152 data points, chi2=0.18)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,598 | INFO     | ..............................
[2025-06-06 03:46:41] 2025-06-06 01:45:16,598 | INFO     | . Timing measurements:
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . get job = 0 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . initial setup = 1 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . payload setup = 6 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . stage-in = 0 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . payload execution = 10838 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . stage-out = 1 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | . log creation = 0 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,599 | INFO     | ..............................
[2025-06-06 03:46:41] 2025-06-06 01:45:16,729 | INFO     | 
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | job summary report
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | --------------------------------------------------
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | PanDA job id: 6678246874
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | task id: 45006595
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | errors: (none)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:46:41] 2025-06-06 01:45:16,730 | INFO     | pilot state: finished 
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | transexitcode: 0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | exeerrorcode: 0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | exeerrordiag: 
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | exitcode: 0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | exitmsg: OK
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | cpuconsumptiontime: 41395 s
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | nevents: 400
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | neventsw: 0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,731 | INFO     | pid: 242593
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | pgrp: 242593
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | corecount: 4
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | event service: False
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 12: 2397643, 10849: 2426541, 10851: 2435688, 10857: 2435802}
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | --------------------------------------------------
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | 
[2025-06-06 03:46:41] 2025-06-06 01:45:16,732 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-06 03:46:41] 2025-06-06 01:45:16,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:46:41] 2025-06-06 01:45:16,755 | INFO     | job 6678246874 has completed (purged errors)
[2025-06-06 03:46:41] 2025-06-06 01:45:16,755 | INFO     | overall cleanup function is called
[2025-06-06 03:46:41] 2025-06-06 01:45:17,763 | INFO     | --- collectZombieJob: --- 10, [242593]
[2025-06-06 03:46:41] 2025-06-06 01:45:17,763 | INFO     | zombie collector waiting for pid 242593
[2025-06-06 03:46:41] 2025-06-06 01:45:17,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:46:41] 2025-06-06 01:45:17,763 | INFO     | collected zombie processes
[2025-06-06 03:46:41] 2025-06-06 01:45:17,763 | INFO     | will attempt to kill all subprocesses of pid=242593
[2025-06-06 03:46:41] 2025-06-06 01:45:18,079 | INFO     | process IDs to be killed: [242593] (in reverse order)
[2025-06-06 03:46:41] 2025-06-06 01:45:18,157 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:46:41] 2025-06-06 01:45:18,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:46:41] 2025-06-06 01:45:18,166 | INFO     | did not find any defunct processes belonging to 242593
[2025-06-06 03:46:41] 2025-06-06 01:45:18,174 | INFO     | did not find any defunct processes belonging to 242593
[2025-06-06 03:46:41] 2025-06-06 01:45:18,174 | INFO     | ready for new job
[2025-06-06 03:46:41] 2025-06-06 01:45:18,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:46:41] 2025-06-06 01:45:18,176 | INFO     | **************************************
[2025-06-06 03:46:41] 2025-06-06 01:45:18,176 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:46:41] 2025-06-06 01:45:18,177 | INFO     | **************************************
[2025-06-06 03:46:41] 2025-06-06 01:45:18,177 | INFO     | 
[2025-06-06 03:46:41] 2025-06-06 01:45:18,179 | INFO     | architecture information:
[2025-06-06 03:46:41] 2025-06-06 01:45:18,179 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:46:41] 2025-06-06 01:45:18,191 | INFO     | cat /etc/os-release:
[2025-06-06 03:46:41] NAME="CentOS Linux"
[2025-06-06 03:46:41] VERSION="7 (Core)"
[2025-06-06 03:46:41] ID="centos"
[2025-06-06 03:46:41] ID_LIKE="rhel fedora"
[2025-06-06 03:46:41] VERSION_ID="7"
[2025-06-06 03:46:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:46:41] ANSI_COLOR="0;31"
[2025-06-06 03:46:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:46:41] HOME_URL="https://www.centos.org/"
[2025-06-06 03:46:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:46:41] 
[2025-06-06 03:46:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:46:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:46:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:46:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:46:41] 
[2025-06-06 03:46:41] 2025-06-06 01:45:18,191 | INFO     | **************************************
[2025-06-06 03:46:41] 2025-06-06 01:45:18,694 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-06 03:46:41] 2025-06-06 01:45:18,708 | INFO     | sufficient remaining disk space (1651850084352 B)
[2025-06-06 03:46:41] 2025-06-06 01:45:18,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:46:41] 2025-06-06 01:45:18,708 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:46:41] 2025-06-06 01:45:18,708 | INFO     | update_server=False
[2025-06-06 03:46:41] 2025-06-06 01:45:18,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:46:41] 2025-06-06 01:45:18,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:46:41] 2025-06-06 01:45:18,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:46:41] 2025-06-06 01:45:18,709 | INFO     | aborting loop
[2025-06-06 03:46:41] 2025-06-06 01:45:18,824 | INFO     | all data control threads have been joined
[2025-06-06 03:46:41] 2025-06-06 01:45:19,316 | INFO     | all payload control threads have been joined
[2025-06-06 03:46:41] 2025-06-06 01:45:19,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:46:41] 2025-06-06 01:45:19,511 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:46:41] 2025-06-06 01:45:19,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:46:41] 2025-06-06 01:45:19,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:46:41] 2025-06-06 01:45:19,714 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:19,715 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:19,715 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:19,797 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:19,830 | INFO     | [data] control thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:19,972 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:20,194 | INFO     | all job control threads have been joined
[2025-06-06 03:46:41] 2025-06-06 01:45:20,321 | INFO     | [payload] control thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:20,534 | INFO     | [job] validate thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:20,542 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:20,542 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:20,812 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:21,004 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:21,118 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:21,198 | INFO     | [job] control thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:21,458 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:22,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:46:41] 2025-06-06 01:45:26,064 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:46:41] 2025-06-06 01:45:28,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23219310323520)>', '<ExcThread(monitor, started 23219069216512)>']
[2025-06-06 03:46:41] 2025-06-06 01:45:28,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:46:41] 2025-06-06 01:45:28,555 | INFO     | [monitor] control thread has ended
[2025-06-06 03:46:41] 2025-06-06 01:45:33,051 | INFO     | all workflow threads have been joined
[2025-06-06 03:46:41] 2025-06-06 01:45:33,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:46:41] 2025-06-06 01:45:33,051 | INFO     | traces error code: 0
[2025-06-06 03:46:41] 2025-06-06 01:45:33,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:46:41] 2025-06-06 01:45:33,163 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:46:41] 2025-06-06 01:45:33,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:46:41] 2025-06-06 01:45:33,168 [wrapper] pilotpid: 235796
[2025-06-06 03:46:41] 2025-06-06 01:45:33,170 [wrapper] Pilot exit status: 0
[2025-06-06 03:46:41] 2025-06-06 01:45:33,179 [wrapper] pandaids: 6678246874
[2025-06-06 03:46:41] 2025-06-06 01:45:33,228 [wrapper] cleanup supervisor_pilot  426822 235797
[2025-06-06 03:46:41] 2025-06-06 01:45:33,230 [wrapper] Test setup, not cleaning
[2025-06-06 03:46:41] 2025-06-06 01:45:33,232 [wrapper] apfmon messages muted
[2025-06-06 03:46:41] 2025-06-06 01:45:33,234 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:46:41] 2025-06-06 01:45:33,235 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:46:41]  *** Error codes and diagnostics ***
[2025-06-06 03:46:41]     "exeErrorCode": 0,
[2025-06-06 03:46:41]     "exeErrorDiag": "",
[2025-06-06 03:46:41]     "pilotErrorCode": 0,
[2025-06-06 03:46:41]     "pilotErrorDiag": "",
[2025-06-06 03:46:41]  *** Listing of results directory ***
[2025-06-06 03:46:41] total 393372
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-06 03:46:41] -rwx------ 1 boinc boinc     37140 Jun  4 04:07 runpilot2-wrapper.sh
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:07 queuedata.json
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc       100 Jun  6 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:46:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 00:43 run_atlas
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc       105 Jun  6 00:43 job.xml
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc      6419 Jun  6 00:43 init_data.xml
[2025-06-06 03:46:41] -rw-r--r-- 2 boinc boinc 215750336 Jun  6 00:43 EVNT.45006593._002013.pool.root.1
[2025-06-06 03:46:41] drwxrwx--x 2 boinc boinc      4096 Jun  6 00:43 shared
[2025-06-06 03:46:41] -rw-r--r-- 2 boinc boinc    508877 Jun  6 00:43 input.tar.gz
[2025-06-06 03:46:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:43 start_atlas.sh
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc         0 Jun  6 00:43 boinc_lockfile
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc      2525 Jun  6 00:43 pandaJob.out
[2025-06-06 03:46:41] -rw------- 1 boinc boinc    987721 Jun  6 00:44 agis_schedconf.cvmfs.json
[2025-06-06 03:46:41] drwx------ 4 boinc boinc      4096 Jun  6 00:44 pilot3
[2025-06-06 03:46:41] -rw------- 1 boinc boinc 180577897 Jun  6 03:44 HITS.45006595._050202.pool.root.1
[2025-06-06 03:46:41] -rw------- 1 boinc boinc        95 Jun  6 03:44 pilot_heartbeat.json
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc       528 Jun  6 03:44 boinc_task_state.xml
[2025-06-06 03:46:41] -rw------- 1 boinc boinc      1035 Jun  6 03:45 memory_monitor_summary.json
[2025-06-06 03:46:41] -rw------- 1 boinc boinc   1598969 Jun  6 03:45 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:46:41] -rw------- 1 boinc boinc    296840 Jun  6 03:45 log.45006595._050202.job.log.tgz.1
[2025-06-06 03:46:41] -rw------- 1 boinc boinc      7728 Jun  6 03:45 heartbeat.json
[2025-06-06 03:46:41] -rw------- 1 boinc boinc      4364 Jun  6 03:45 pilotlog.txt
[2025-06-06 03:46:41] -rw------- 1 boinc boinc   1028427 Jun  6 03:45 log.45006595._050202.job.log.1
[2025-06-06 03:46:41] -rw------- 1 boinc boinc       357 Jun  6 03:45 output.list
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc       620 Jun  6 03:45 runtime_log
[2025-06-06 03:46:41] -rw------- 1 boinc boinc   1341440 Jun  6 03:45 result.tar.gz
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc      9026 Jun  6 03:45 runtime_log.err
[2025-06-06 03:46:41] -rw------- 1 boinc boinc       665 Jun  6 03:45 YAHODmVisg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaVaKDmO1HXAn.diag
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc        26 Jun  6 03:46 wrapper_checkpoint.txt
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc      8192 Jun  6 03:46 boinc_mmap_file
[2025-06-06 03:46:41] -rw-r--r-- 1 boinc boinc     20892 Jun  6 03:46 stderr.txt
[2025-06-06 03:46:41] HITS file was successfully produced:
[2025-06-06 03:46:41] -rw------- 1 boinc boinc 180577897 Jun  6 03:44 shared/HITS.pool.root.1
[2025-06-06 03:46:41]  *** Contents of shared directory: ***
[2025-06-06 03:46:41] total 388876
[2025-06-06 03:46:41] -rw-r--r-- 2 boinc boinc 215750336 Jun  6 00:43 ATLAS.root_0
[2025-06-06 03:46:41] -rw-r--r-- 2 boinc boinc    508877 Jun  6 00:43 input.tar.gz
[2025-06-06 03:46:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:43 start_atlas.sh
[2025-06-06 03:46:41] -rw------- 1 boinc boinc 180577897 Jun  6 03:44 HITS.pool.root.1
[2025-06-06 03:46:41] -rw------- 1 boinc boinc   1341440 Jun  6 03:45 result.tar.gz
03:46:43 (232112): run_atlas exited; CPU time 41786.839227
03:46:43 (232112): called boinc_finish(0)

</stderr_txt>
]]>

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