Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:50:11 (4048861): wrapper (7.7.26015): starting
11:50:11 (4048861): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 11:50:11] Arguments: --nthreads 4
[2025-06-06 11:50:11] Threads: 4
[2025-06-06 11:50:11] Checking for CVMFS
[2025-06-06 11:50:11] No cvmfs_config command found, will try listing directly
[2025-06-06 11:50:11] CVMFS is ok
[2025-06-06 11:50:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:50:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:50:11] Further information can be found at the LHC@home message board.
[2025-06-06 11:50:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:50:11] Checking for apptainer binary...
[2025-06-06 11:50:11] which: no apptainer in ((null))
[2025-06-06 11:50:11] apptainer is not installed, using version from CVMFS
[2025-06-06 11:50:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:50:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-06 11:50:11] apptainer works
[2025-06-06 11:50:11] Set ATHENA_PROC_NUMBER=4
[2025-06-06 11:50:11] Set ATHENA_CORE_NUMBER=4
[2025-06-06 11:50:11] Starting ATLAS job with PandaID=6678246883
[2025-06-06 11:50:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:18:41]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:18:41]  is_tar=False
[2025-06-06 13:18:41]  lfn=log.45006595._050211.job.log.tgz.1
[2025-06-06 13:18:41]  mtime=0
[2025-06-06 13:18:41]  protocol_id=None
[2025-06-06 13:18:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 13:18:41]  replicas=None
[2025-06-06 13:18:41]  scope=mc23_13p6TeV
[2025-06-06 13:18:41]  status=None
[2025-06-06 13:18:41]  status_code=0
[2025-06-06 13:18:41]  storage_token=
[2025-06-06 13:18:41]  surl=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678246883/log.45006595._050211.job.log.tgz.1
[2025-06-06 13:18:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/e6/log.45006595._050211.job.log.tgz.1
[2025-06-06 13:18:41]  workdir=None
[2025-06-06 13:18:41] ]
[2025-06-06 13:18:41] 2025-06-06 11:17:50,997 | INFO     | transferring file log.45006595._050211.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678246883/log.45006595._050211.job.log.tgz.1 to /scratch/b
[2025-06-06 13:18:41] 2025-06-06 11:17:50,997 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678246883/log.45006595._050211.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2025-06-06 13:18:41] 2025-06-06 11:17:51,016 | INFO     | adding to output.list: log.45006595._050211.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/e6/log.45006595._050211.job.log.tg
[2025-06-06 13:18:41] 2025-06-06 11:17:51,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 13:18:41] 2025-06-06 11:17:51,016 | INFO     | summary of transferred files:
[2025-06-06 13:18:41] 2025-06-06 11:17:51,016 | INFO     |  -- lfn=log.45006595._050211.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 13:18:41] 2025-06-06 11:17:51,017 | INFO     | stage-out finished correctly
[2025-06-06 13:18:41] 2025-06-06 11:17:52,908 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 13:18:41] 2025-06-06 11:17:53,536 | INFO     | job 6678246883 has state=finished
[2025-06-06 13:18:41] 2025-06-06 11:17:53,536 | INFO     | preparing for final server update for job 6678246883 in state='finished'
[2025-06-06 13:18:41] 2025-06-06 11:17:53,537 | INFO     | this job has now completed (state=finished)
[2025-06-06 13:18:41] 2025-06-06 11:17:53,537 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 13:18:41] 2025-06-06 11:17:53,537 | INFO     | log transfer has been attempted: DONE
[2025-06-06 13:18:41] 2025-06-06 11:17:53,537 | INFO     | job 6678246883 has finished - writing final server update
[2025-06-06 13:18:41] 2025-06-06 11:17:53,537 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1561606/.job.ad'
[2025-06-06 13:18:41] 2025-06-06 11:17:53,537 | INFO     | total number of processed events: 400 (read)
[2025-06-06 13:18:41] 2025-06-06 11:17:53,546 | INFO     | executing command: lscpu
[2025-06-06 13:18:41] 2025-06-06 11:17:53,631 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 13:18:41] 2025-06-06 11:17:55,483 | WARNING  | process 4060244 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 13:18:41] 2025-06-06 11:17:55,484 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678246883/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:18:41] 2025-06-06 11:17:55,861 | INFO     | number of running child processes to parent process 4060244: 1
[2025-06-06 13:18:41] 2025-06-06 11:17:55,861 | INFO     | maximum number of monitored processes: 6
[2025-06-06 13:18:41] 2025-06-06 11:17:58,364 | INFO     | monitor loop #380: job 0:6678246883 is in state 'finished'
[2025-06-06 13:18:41] 2025-06-06 11:17:58,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:18:41] 2025-06-06 11:17:58,598 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 13:18:41] 2025-06-06 11:17:58,598 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678246883/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:18:41] 2025-06-06 11:17:58,599 | INFO     | extracted standard info from prmon json
[2025-06-06 13:18:41] 2025-06-06 11:17:58,599 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:18:41] 2025-06-06 11:17:58,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:18:41] 2025-06-06 11:17:58,599 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:18:41] 2025-06-06 11:17:58,599 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:18:41] 2025-06-06 11:17:58,601 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:18:41] 2025-06-06 11:17:58,601 | INFO     | sum of square deviations: 152858680.0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,601 | INFO     | sum of deviations: -1579634283.9999995
[2025-06-06 13:18:41] 2025-06-06 11:17:58,601 | INFO     | mean x: 1749206131.0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,601 | INFO     | mean y: 2343605.759493671
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | -- intersect: 18078556054.47745
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | intersect: 18078556054.47745
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | chi2: 0.0038526368334553577
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | -- intersect: 18078556054.47745
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | current memory leak: -10.33 B/s (using 79 data points, chi2=0.00)
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | ..............................
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | . Timing measurements:
[2025-06-06 13:18:41] 2025-06-06 11:17:58,602 | INFO     | . get job = 0 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | . initial setup = 1 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | . payload setup = 6 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | . stage-in = 0 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | . payload execution = 5224 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | . stage-out = 0 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | . log creation = 0 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,603 | INFO     | ..............................
[2025-06-06 13:18:41] 2025-06-06 11:17:58,687 | INFO     | 
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | job summary report
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | --------------------------------------------------
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | PanDA job id: 6678246883
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | task id: 45006595
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | errors: (none)
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | pilot state: finished 
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | transexitcode: 0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | exeerrorcode: 0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | exeerrordiag: 
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | exitcode: 0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | exitmsg: OK
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | cpuconsumptiontime: 20049 s
[2025-06-06 13:18:41] 2025-06-06 11:17:58,688 | INFO     | nevents: 400
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | neventsw: 0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | pid: 4060244
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | pgrp: 4060244
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | corecount: 4
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | event service: False
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 5234: 2423974, 5235: 2433120, 5237: 2433120, 5243: 2433290}
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | --------------------------------------------------
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | 
[2025-06-06 13:18:41] 2025-06-06 11:17:58,689 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-06-06 13:18:41] 2025-06-06 11:17:58,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:18:41] 2025-06-06 11:17:58,715 | INFO     | job 6678246883 has completed (purged errors)
[2025-06-06 13:18:41] 2025-06-06 11:17:58,716 | INFO     | overall cleanup function is called
[2025-06-06 13:18:41] 2025-06-06 11:17:59,724 | INFO     | --- collectZombieJob: --- 10, [4060244]
[2025-06-06 13:18:41] 2025-06-06 11:17:59,725 | INFO     | zombie collector waiting for pid 4060244
[2025-06-06 13:18:41] 2025-06-06 11:17:59,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:18:41] 2025-06-06 11:17:59,725 | INFO     | collected zombie processes
[2025-06-06 13:18:41] 2025-06-06 11:17:59,725 | INFO     | will attempt to kill all subprocesses of pid=4060244
[2025-06-06 13:18:41] 2025-06-06 11:18:00,126 | INFO     | process IDs to be killed: [4060244] (in reverse order)
[2025-06-06 13:18:41] 2025-06-06 11:18:00,269 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:18:41] 2025-06-06 11:18:00,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:18:41] 2025-06-06 11:18:00,288 | INFO     | did not find any defunct processes belonging to 4060244
[2025-06-06 13:18:41] 2025-06-06 11:18:00,301 | INFO     | did not find any defunct processes belonging to 4060244
[2025-06-06 13:18:41] 2025-06-06 11:18:00,301 | INFO     | ready for new job
[2025-06-06 13:18:41] 2025-06-06 11:18:00,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:18:41] 2025-06-06 11:18:00,302 | INFO     | **************************************
[2025-06-06 13:18:41] 2025-06-06 11:18:00,302 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:18:41] 2025-06-06 11:18:00,302 | INFO     | **************************************
[2025-06-06 13:18:41] 2025-06-06 11:18:00,302 | INFO     | 
[2025-06-06 13:18:41] 2025-06-06 11:18:00,308 | INFO     | architecture information:
[2025-06-06 13:18:41] 2025-06-06 11:18:00,308 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:18:41] 2025-06-06 11:18:00,322 | INFO     | cat /etc/os-release:
[2025-06-06 13:18:41] NAME="CentOS Linux"
[2025-06-06 13:18:41] VERSION="7 (Core)"
[2025-06-06 13:18:41] ID="centos"
[2025-06-06 13:18:41] ID_LIKE="rhel fedora"
[2025-06-06 13:18:41] VERSION_ID="7"
[2025-06-06 13:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:18:41] ANSI_COLOR="0;31"
[2025-06-06 13:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:18:41] HOME_URL="https://www.centos.org/"
[2025-06-06 13:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:18:41] 
[2025-06-06 13:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:18:41] 
[2025-06-06 13:18:41] 2025-06-06 11:18:00,322 | INFO     | **************************************
[2025-06-06 13:18:41] 2025-06-06 11:18:00,825 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-06 13:18:41] 2025-06-06 11:18:00,846 | INFO     | sufficient remaining disk space (3352384503808 B)
[2025-06-06 13:18:41] 2025-06-06 11:18:00,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:18:41] 2025-06-06 11:18:00,846 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:18:41] 2025-06-06 11:18:00,846 | INFO     | update_server=False
[2025-06-06 13:18:41] 2025-06-06 11:18:00,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:18:41] 2025-06-06 11:18:00,859 | INFO     | all job control threads have been joined
[2025-06-06 13:18:41] 2025-06-06 11:18:00,867 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 13:18:41] 2025-06-06 11:18:00,867 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 13:18:41] 2025-06-06 11:18:00,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:18:41] 2025-06-06 11:18:00,867 | INFO     | will abort loop
[2025-06-06 13:18:41] 2025-06-06 11:18:00,960 | INFO     | all payload control threads have been joined
[2025-06-06 13:18:41] 2025-06-06 11:18:01,523 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:18:41] 2025-06-06 11:18:01,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:18:41] 2025-06-06 11:18:01,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:18:41] 2025-06-06 11:18:01,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:18:41] 2025-06-06 11:18:01,759 | INFO     | all data control threads have been joined
[2025-06-06 13:18:41] 2025-06-06 11:18:01,852 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:01,865 | INFO     | [job] control thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:01,872 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:01,966 | INFO     | [payload] control thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,103 | INFO     | [job] validate thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,162 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,166 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,247 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,289 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,632 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,765 | INFO     | [data] control thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:02,888 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:03,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:18:41] 2025-06-06 11:18:03,598 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:03,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:18:41] 2025-06-06 11:18:04,704 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:07,513 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:11,232 | INFO     | job.realtimelogging is not enabled
[2025-06-06 13:18:41] 2025-06-06 11:18:12,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:18:41] 2025-06-06 11:18:13,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22984118155072)>', '<ExcThread(monitor, started 22983884117760)>']
[2025-06-06 13:18:41] 2025-06-06 11:18:13,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:18:41] 2025-06-06 11:18:13,583 | INFO     | [monitor] control thread has ended
[2025-06-06 13:18:41] 2025-06-06 11:18:18,547 | INFO     | all workflow threads have been joined
[2025-06-06 13:18:41] 2025-06-06 11:18:18,547 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:18:41] 2025-06-06 11:18:18,547 | INFO     | traces error code: 0
[2025-06-06 13:18:41] 2025-06-06 11:18:18,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:18:41] 2025-06-06 11:18:18,667 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:18:41] 2025-06-06 11:18:18,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:18:41] 2025-06-06 11:18:18,673 [wrapper] pilotpid: 4052810
[2025-06-06 13:18:41] 2025-06-06 11:18:18,675 [wrapper] Pilot exit status: 0
[2025-06-06 13:18:41] 2025-06-06 11:18:18,688 [wrapper] pandaids: 6678246883
[2025-06-06 13:18:41] 2025-06-06 11:18:18,807 [wrapper] cleanup supervisor_pilot   91213 4052811
[2025-06-06 13:18:41] 2025-06-06 11:18:18,810 [wrapper] Test setup, not cleaning
[2025-06-06 13:18:41] 2025-06-06 11:18:18,813 [wrapper] apfmon messages muted
[2025-06-06 13:18:41] 2025-06-06 11:18:18,816 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:18:41] 2025-06-06 11:18:18,818 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:18:41]  *** Error codes and diagnostics ***
[2025-06-06 13:18:41]     "exeErrorCode": 0,
[2025-06-06 13:18:41]     "exeErrorDiag": "",
[2025-06-06 13:18:41]     "pilotErrorCode": 0,
[2025-06-06 13:18:41]     "pilotErrorDiag": "",
[2025-06-06 13:18:41]  *** Listing of results directory ***
[2025-06-06 13:18:41] total 391012
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-06 13:18:41] -rwx------ 1 boinc boinc     37140 Jun  4 04:07 runpilot2-wrapper.sh
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:07 queuedata.json
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:18:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:50 run_atlas
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:50 job.xml
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc      6686 Jun  6 11:50 init_data.xml
[2025-06-06 13:18:41] -rw-r--r-- 2 boinc boinc 215750336 Jun  6 11:50 EVNT.45006593._002013.pool.root.1
[2025-06-06 13:18:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:50 start_atlas.sh
[2025-06-06 13:18:41] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:50 shared
[2025-06-06 13:18:41] -rw-r--r-- 2 boinc boinc    508880 Jun  6 11:50 input.tar.gz
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:50 boinc_lockfile
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc      2525 Jun  6 11:50 pandaJob.out
[2025-06-06 13:18:41] -rw------- 1 boinc boinc    987967 Jun  6 11:50 agis_schedconf.cvmfs.json
[2025-06-06 13:18:41] -rw------- 1 boinc boinc   1598969 Jun  6 11:50 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:18:41] drwx------ 4 boinc boinc      4096 Jun  6 11:50 pilot3
[2025-06-06 13:18:41] -rw------- 1 boinc boinc 179297623 Jun  6 13:17 HITS.45006595._050211.pool.root.1
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc       528 Jun  6 13:17 boinc_task_state.xml
[2025-06-06 13:18:41] -rw------- 1 boinc boinc      1039 Jun  6 13:17 memory_monitor_summary.json
[2025-06-06 13:18:41] -rw------- 1 boinc boinc    250146 Jun  6 13:17 log.45006595._050211.job.log.tgz.1
[2025-06-06 13:18:41] -rw------- 1 boinc boinc        95 Jun  6 13:17 pilot_heartbeat.json
[2025-06-06 13:18:41] -rw------- 1 boinc boinc      7697 Jun  6 13:17 heartbeat.json
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc        26 Jun  6 13:18 wrapper_checkpoint.txt
[2025-06-06 13:18:41] -rw------- 1 boinc boinc      4622 Jun  6 13:18 pilotlog.txt
[2025-06-06 13:18:41] -rw------- 1 boinc boinc    507741 Jun  6 13:18 log.45006595._050211.job.log.1
[2025-06-06 13:18:41] -rw------- 1 boinc boinc       357 Jun  6 13:18 output.list
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc       620 Jun  6 13:18 runtime_log
[2025-06-06 13:18:41] -rw------- 1 boinc boinc    778240 Jun  6 13:18 result.tar.gz
[2025-06-06 13:18:41] -rw------- 1 boinc boinc       661 Jun  6 13:18 t6GKDmWisg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjVaKDmCUJCfm.diag
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc      9025 Jun  6 13:18 runtime_log.err
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc      8192 Jun  6 13:18 boinc_mmap_file
[2025-06-06 13:18:41] -rw-r--r-- 1 boinc boinc     21337 Jun  6 13:18 stderr.txt
[2025-06-06 13:18:41] HITS file was successfully produced:
[2025-06-06 13:18:41] -rw------- 1 boinc boinc 179297623 Jun  6 13:17 shared/HITS.pool.root.1
[2025-06-06 13:18:41]  *** Contents of shared directory: ***
[2025-06-06 13:18:41] total 387072
[2025-06-06 13:18:41] -rw-r--r-- 2 boinc boinc 215750336 Jun  6 11:50 ATLAS.root_0
[2025-06-06 13:18:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:50 start_atlas.sh
[2025-06-06 13:18:41] -rw-r--r-- 2 boinc boinc    508880 Jun  6 11:50 input.tar.gz
[2025-06-06 13:18:41] -rw------- 1 boinc boinc 179297623 Jun  6 13:17 HITS.pool.root.1
[2025-06-06 13:18:41] -rw------- 1 boinc boinc    778240 Jun  6 13:18 result.tar.gz
13:18:42 (4048861): run_atlas exited; CPU time 20265.647106
13:18:42 (4048861): called boinc_finish(0)

</stderr_txt>
]]>

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