Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:31:42 (3348): wrapper (7.7.26015): starting
02:31:42 (3348): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 02:31:42] Arguments: --nthreads 12
[2025-06-04 02:31:42] Threads: 12
[2025-06-04 02:31:42] Checking for CVMFS
[2025-06-04 02:31:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:31:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:31:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:31:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:31:42] 2.11.2.0 2979 35325 93800 146771 1 58 18594777 20275200 1 130560 0 15482291 99.983 6106758 7414 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 02:31:42] CVMFS is ok
[2025-06-04 02:31:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:31:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:31:42] Further information can be found at the LHC@home message board.
[2025-06-04 02:31:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:31:42] Checking for apptainer binary...
[2025-06-04 02:31:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:31:42] Running /usr/bin/apptainer --version
[2025-06-04 02:31:43] apptainer version 1.3.2-1.el7
[2025-06-04 02:31:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:31:44] c-205-7.aglt2.org
[2025-06-04 02:31:44] apptainer works
[2025-06-04 02:31:44] Set ATHENA_PROC_NUMBER=12
[2025-06-04 02:31:44] Set ATHENA_CORE_NUMBER=12
[2025-06-04 02:31:44] Starting ATLAS job with PandaID=6678246911
[2025-06-04 02:31:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:34:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:34:03]  guid=666eab70-346c-4b65-a56d-9db1354a6d9f
[2025-06-04 03:34:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 03:34:03]  is_altstaged=None
[2025-06-04 03:34:03]  is_tar=False
[2025-06-04 03:34:03]  lfn=log.45006595._050239.job.log.tgz.1
[2025-06-04 03:34:03]  mtime=0
[2025-06-04 03:34:03]  protocol_id=None
[2025-06-04 03:34:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:34:03]  replicas=None
[2025-06-04 03:34:03]  scope=mc23_13p6TeV
[2025-06-04 03:34:03]  status=None
[2025-06-04 03:34:03]  status_code=0
[2025-06-04 03:34:03]  storage_token=
[2025-06-04 03:34:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678246911/log.45006595._050239.job.log.tgz.1
[2025-06-04 03:34:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/96/log.45006595._050239.job.log.tgz.1
[2025-06-04 03:34:03]  workdir=None
[2025-06-04 03:34:03] ]
[2025-06-04 03:34:03] 2025-06-04 07:33:43,645 | INFO     | transferring file log.45006595._050239.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678246911/log.45006595._050239.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 03:34:03] 2025-06-04 07:33:43,645 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678246911/log.45006595._050239.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._050239.job
[2025-06-04 03:34:03] 2025-06-04 07:33:43,668 | INFO     | adding to output.list: log.45006595._050239.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/96/log.45006595._050239.job.log.tg
[2025-06-04 03:34:03] 2025-06-04 07:33:43,669 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:34:03] 2025-06-04 07:33:43,670 | INFO     | summary of transferred files:
[2025-06-04 03:34:03] 2025-06-04 07:33:43,670 | INFO     |  -- lfn=log.45006595._050239.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:34:03] 2025-06-04 07:33:43,670 | INFO     | stage-out finished correctly
[2025-06-04 03:34:03] 2025-06-04 07:33:45,268 | INFO     | monitor loop #280: job 0:6678246911 is in state 'finished'
[2025-06-04 03:34:03] 2025-06-04 07:33:45,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:34:03] 2025-06-04 07:33:46,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:34:03] 2025-06-04 07:33:46,514 | INFO     | job 6678246911 has state=finished
[2025-06-04 03:34:03] 2025-06-04 07:33:46,515 | INFO     | preparing for final server update for job 6678246911 in state='finished'
[2025-06-04 03:34:03] 2025-06-04 07:33:46,515 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:34:03] 2025-06-04 07:33:46,515 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:34:03] 2025-06-04 07:33:46,515 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:34:03] 2025-06-04 07:33:46,516 | INFO     | job 6678246911 has finished - writing final server update
[2025-06-04 03:34:03] 2025-06-04 07:33:46,516 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:34:03] 2025-06-04 07:33:46,517 | INFO     | executing command: lscpu
[2025-06-04 03:34:03] 2025-06-04 07:33:46,544 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:34:03] 2025-06-04 07:33:47,781 | INFO     | monitor loop #281: job 0:6678246911 is in state 'finished'
[2025-06-04 03:34:03] 2025-06-04 07:33:47,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:34:03] 2025-06-04 07:33:50,285 | INFO     | monitor loop #282: job 0:6678246911 is in state 'finished'
[2025-06-04 03:34:03] 2025-06-04 07:33:50,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:34:03] 2025-06-04 07:33:51,209 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 03:34:03] 2025-06-04 07:33:51,210 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678246911/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:34:03] 2025-06-04 07:33:51,211 | INFO     | extracted standard info from prmon json
[2025-06-04 03:34:03] 2025-06-04 07:33:51,211 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:34:03] 2025-06-04 07:33:51,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:34:03] 2025-06-04 07:33:51,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:34:03] 2025-06-04 07:33:51,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:34:03] 2025-06-04 07:33:51,214 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:34:03] 2025-06-04 07:33:51,214 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 03:34:03] 2025-06-04 07:33:51,215 | INFO     | sum of deviations: -3343517116.0
[2025-06-04 03:34:03] 2025-06-04 07:33:51,215 | INFO     | mean x: 1749020669.5
[2025-06-04 03:34:03] 2025-06-04 07:33:51,215 | INFO     | mean y: 2860997.074074074
[2025-06-04 03:34:03] 2025-06-04 07:33:51,215 | INFO     | -- intersect: 119811393805.00572
[2025-06-04 03:34:03] 2025-06-04 07:33:51,216 | INFO     | intersect: 119811393805.00572
[2025-06-04 03:34:03] 2025-06-04 07:33:51,216 | INFO     | chi2: 0.09631281631838115
[2025-06-04 03:34:03] 2025-06-04 07:33:51,216 | INFO     | -- intersect: 119811393805.00572
[2025-06-04 03:34:03] 2025-06-04 07:33:51,216 | INFO     | current memory leak: -68.50 B/s (using 54 data points, chi2=0.10)
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | ..............................
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . Timing measurements:
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . get job = 0 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . initial setup = 2 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . payload setup = 9 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . stage-in = 0 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . payload execution = 3676 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,217 | INFO     | . stage-out = 0 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,218 | INFO     | . log creation = 0 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,218 | INFO     | ..............................
[2025-06-04 03:34:03] 2025-06-04 07:33:51,303 | INFO     | 
[2025-06-04 03:34:03] 2025-06-04 07:33:51,304 | INFO     | job summary report
[2025-06-04 03:34:03] 2025-06-04 07:33:51,304 | INFO     | --------------------------------------------------
[2025-06-04 03:34:03] 2025-06-04 07:33:51,304 | INFO     | PanDA job id: 6678246911
[2025-06-04 03:34:03] 2025-06-04 07:33:51,304 | INFO     | task id: 45006595
[2025-06-04 03:34:03] 2025-06-04 07:33:51,304 | INFO     | errors: (none)
[2025-06-04 03:34:03] 2025-06-04 07:33:51,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:34:03] 2025-06-04 07:33:51,305 | INFO     | pilot state: finished 
[2025-06-04 03:34:03] 2025-06-04 07:33:51,305 | INFO     | transexitcode: 0
[2025-06-04 03:34:03] 2025-06-04 07:33:51,305 | INFO     | exeerrorcode: 0
[2025-06-04 03:34:03] 2025-06-04 07:33:51,305 | INFO     | exeerrordiag: 
[2025-06-04 03:34:03] 2025-06-04 07:33:51,305 | INFO     | exitcode: 0
[2025-06-04 03:34:03] 2025-06-04 07:33:51,305 | INFO     | exitmsg: OK
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | cpuconsumptiontime: 38917 s
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | nevents: 400
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | neventsw: 0
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | pid: 13407
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | pgrp: 13407
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | corecount: 12
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | event service: False
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3689: 2431013, 3690: 2439954, 3693: 2440010, 3697: 2440308}
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | --------------------------------------------------
[2025-06-04 03:34:03] 2025-06-04 07:33:51,306 | INFO     | 
[2025-06-04 03:34:03] 2025-06-04 07:33:51,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 03:34:03] 2025-06-04 07:33:51,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:34:03] 2025-06-04 07:33:51,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:34:03] 2025-06-04 07:33:51,332 | INFO     | job 6678246911 has completed (purged errors)
[2025-06-04 03:34:03] 2025-06-04 07:33:51,332 | INFO     | overall cleanup function is called
[2025-06-04 03:34:03] 2025-06-04 07:33:52,340 | INFO     | --- collectZombieJob: --- 10, [13407]
[2025-06-04 03:34:03] 2025-06-04 07:33:52,341 | INFO     | zombie collector waiting for pid 13407
[2025-06-04 03:34:03] 2025-06-04 07:33:52,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:34:03] 2025-06-04 07:33:52,341 | INFO     | collected zombie processes
[2025-06-04 03:34:03] 2025-06-04 07:33:52,341 | INFO     | will attempt to kill all subprocesses of pid=13407
[2025-06-04 03:34:03] 2025-06-04 07:33:52,431 | INFO     | process IDs to be killed: [13407] (in reverse order)
[2025-06-04 03:34:03] 2025-06-04 07:33:52,484 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:34:03] 2025-06-04 07:33:52,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:34:03] 2025-06-04 07:33:52,487 | INFO     | did not find any defunct processes belonging to 13407
[2025-06-04 03:34:03] 2025-06-04 07:33:52,490 | INFO     | did not find any defunct processes belonging to 13407
[2025-06-04 03:34:03] 2025-06-04 07:33:52,490 | INFO     | ready for new job
[2025-06-04 03:34:03] 2025-06-04 07:33:52,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:34:03] 2025-06-04 07:33:52,491 | INFO     | **************************************
[2025-06-04 03:34:03] 2025-06-04 07:33:52,491 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:34:03] 2025-06-04 07:33:52,491 | INFO     | **************************************
[2025-06-04 03:34:03] 2025-06-04 07:33:52,491 | INFO     | 
[2025-06-04 03:34:03] 2025-06-04 07:33:52,492 | INFO     | architecture information:
[2025-06-04 03:34:03] 2025-06-04 07:33:52,492 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:34:03] 2025-06-04 07:33:52,507 | INFO     | cat /etc/os-release:
[2025-06-04 03:34:03] NAME="CentOS Linux"
[2025-06-04 03:34:03] VERSION="7 (Core)"
[2025-06-04 03:34:03] ID="centos"
[2025-06-04 03:34:03] ID_LIKE="rhel fedora"
[2025-06-04 03:34:03] VERSION_ID="7"
[2025-06-04 03:34:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:34:03] ANSI_COLOR="0;31"
[2025-06-04 03:34:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:34:03] HOME_URL="https://www.centos.org/"
[2025-06-04 03:34:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:34:03] 
[2025-06-04 03:34:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:34:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:34:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:34:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:34:03] 
[2025-06-04 03:34:03] 2025-06-04 07:33:52,508 | INFO     | **************************************
[2025-06-04 03:34:03] 2025-06-04 07:33:53,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 03:34:03] 2025-06-04 07:33:53,028 | INFO     | sufficient remaining disk space (29428285440 B)
[2025-06-04 03:34:03] 2025-06-04 07:33:53,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:34:03] 2025-06-04 07:33:53,028 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:34:03] 2025-06-04 07:33:53,028 | INFO     | update_server=False
[2025-06-04 03:34:03] 2025-06-04 07:33:53,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:34:03] 2025-06-04 07:33:53,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:34:03] 2025-06-04 07:33:53,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:34:03] 2025-06-04 07:33:53,030 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:34:03] 2025-06-04 07:33:53,030 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:34:03] 2025-06-04 07:33:53,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:34:03] 2025-06-04 07:33:53,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:34:03] 2025-06-04 07:33:53,790 | INFO     | all job control threads have been joined
[2025-06-04 03:34:03] 2025-06-04 07:33:53,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:34:03] 2025-06-04 07:33:53,806 | INFO     | aborting loop
[2025-06-04 03:34:03] 2025-06-04 07:33:53,833 | INFO     | all data control threads have been joined
[2025-06-04 03:34:03] 2025-06-04 07:33:54,034 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,035 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,176 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,265 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:34:03] 2025-06-04 07:33:54,315 | INFO     | all payload control threads have been joined
[2025-06-04 03:34:03] 2025-06-04 07:33:54,796 | INFO     | [job] control thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,811 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,838 | INFO     | [data] control thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,909 | INFO     | [job] validate thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:54,910 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:55,012 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:55,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:55,320 | INFO     | [payload] control thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:55,476 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:55,536 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:56,279 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:57,036 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:34:03] 2025-06-04 07:33:57,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148111324992)>', '<ExcThread(monitor, started 140147400111872)>']
[2025-06-04 03:34:03] 2025-06-04 07:33:58,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:34:03] 2025-06-04 07:33:58,043 | INFO     | [monitor] control thread has ended
[2025-06-04 03:34:03] 2025-06-04 07:34:02,963 | INFO     | all workflow threads have been joined
[2025-06-04 03:34:03] 2025-06-04 07:34:02,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:34:03] 2025-06-04 07:34:02,963 | INFO     | traces error code: 0
[2025-06-04 03:34:03] 2025-06-04 07:34:02,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:34:03] 2025-06-04 07:34:03,046 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:34:03] 2025-06-04 07:34:03,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:34:03] 2025-06-04 07:34:03,054 [wrapper] pilotpid: 6940
[2025-06-04 03:34:03] 2025-06-04 07:34:03,057 [wrapper] Pilot exit status: 0
[2025-06-04 03:34:03] 2025-06-04 07:34:03,073 [wrapper] pandaids: 6678246911
[2025-06-04 03:34:03] 2025-06-04 07:34:03,113 [wrapper] cleanup supervisor_pilot 21239 6942
[2025-06-04 03:34:03] 2025-06-04 07:34:03,118 [wrapper] Test setup, not cleaning
[2025-06-04 03:34:03] 2025-06-04 07:34:03,122 [wrapper] apfmon messages muted
[2025-06-04 03:34:03] 2025-06-04 07:34:03,126 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:34:03] 2025-06-04 07:34:03,130 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:34:03]  *** Error codes and diagnostics ***
[2025-06-04 03:34:03]     "exeErrorCode": 0,
[2025-06-04 03:34:03]     "exeErrorDiag": "",
[2025-06-04 03:34:03]     "pilotErrorCode": 0,
[2025-06-04 03:34:03]     "pilotErrorDiag": "",
[2025-06-04 03:34:03]  *** Listing of results directory ***
[2025-06-04 03:34:03] total 384188
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 21:59 pilot3.tar.gz
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 22:09 queuedata.json
[2025-06-04 03:34:03] -rwx------ 1 boincer umatlas     37140 Jun  3 22:09 runpilot2-wrapper.sh
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:34:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 02:31 run_atlas
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 02:31 job.xml
[2025-06-04 03:34:03] -rw-r--r-- 2 boincer umatlas 214936700 Jun  4 02:31 EVNT.45006593._002014.pool.root.1
[2025-06-04 03:34:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:31 start_atlas.sh
[2025-06-04 03:34:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 02:31 shared
[2025-06-04 03:34:03] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 02:31 input.tar.gz
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 02:31 boinc_lockfile
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 02:31 pandaJob.out
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas    986745 Jun  4 02:31 agis_schedconf.cvmfs.json
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas   1603667 Jun  4 02:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:34:03] drwx------ 4 boincer umatlas      4096 Jun  4 02:31 pilot3
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 03:31 init_data.xml
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas 173179623 Jun  4 03:33 HITS.45006595._050239.pool.root.1
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas       529 Jun  4 03:33 boinc_task_state.xml
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas      1049 Jun  4 03:33 memory_monitor_summary.json
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas    361459 Jun  4 03:33 log.45006595._050239.job.log.tgz.1
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas        95 Jun  4 03:33 pilot_heartbeat.json
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas        27 Jun  4 03:33 wrapper_checkpoint.txt
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 03:33 boinc_mmap_file
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas      7750 Jun  4 03:33 heartbeat.json
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas      4476 Jun  4 03:34 pilotlog.txt
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas    366412 Jun  4 03:34 log.45006595._050239.job.log.1
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas       357 Jun  4 03:34 output.list
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas       620 Jun  4 03:34 runtime_log
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas    747520 Jun  4 03:34 result.tar.gz
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas       658 Jun  4 03:34 tFEMDmYksg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaWaKDmPuGjTn.diag
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 03:34 runtime_log.err
[2025-06-04 03:34:03] -rw-r--r-- 1 boincer umatlas     21295 Jun  4 03:34 stderr.txt
[2025-06-04 03:34:03] HITS file was successfully produced:
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas 173179623 Jun  4 03:33 shared/HITS.pool.root.1
[2025-06-04 03:34:03]  *** Contents of shared directory: ***
[2025-06-04 03:34:03] total 380276
[2025-06-04 03:34:03] -rw-r--r-- 2 boincer umatlas 214936700 Jun  4 02:31 ATLAS.root_0
[2025-06-04 03:34:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:31 start_atlas.sh
[2025-06-04 03:34:03] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 02:31 input.tar.gz
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas 173179623 Jun  4 03:33 HITS.pool.root.1
[2025-06-04 03:34:03] -rw------- 1 boincer umatlas    747520 Jun  4 03:34 result.tar.gz
03:34:05 (3348): run_atlas exited; CPU time 38891.906508
03:34:05 (3348): called boinc_finish(0)

</stderr_txt>
]]>

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