Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:05:00 (3444613): wrapper (7.7.26015): starting
16:05:00 (3444613): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 16:05:00] Arguments: --nthreads 4
[2025-06-04 16:05:00] Threads: 4
[2025-06-04 16:05:00] Checking for CVMFS
[2025-06-04 16:05:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:05:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:05:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:05:00] 2.9.2.0 2450764 2591 96128 146781 0 56 32309118 36864000 0 130560 0 2658038 99.993 604066 10065 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 16:05:00] CVMFS is ok
[2025-06-04 16:05:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:05:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:05:00] Further information can be found at the LHC@home message board.
[2025-06-04 16:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:05:00] Checking for apptainer binary...
[2025-06-04 16:05:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:05:00] Running /usr/bin/apptainer --version
[2025-06-04 16:05:00] apptainer version 1.3.6-6.1
[2025-06-04 16:05:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:05:00] belleA253c
[2025-06-04 16:05:00] apptainer works
[2025-06-04 16:05:00] Set ATHENA_PROC_NUMBER=4
[2025-06-04 16:05:00] Set ATHENA_CORE_NUMBER=4
[2025-06-04 16:05:00] Starting ATLAS job with PandaID=6678246213
[2025-06-04 16:05:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:08:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:08:16]  filesize=246816
[2025-06-04 17:08:16]  filetype=log
[2025-06-04 17:08:16]  guid=a36c4609-efab-4d88-b22a-c1875fa4f599
[2025-06-04 17:08:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 17:08:16]  is_altstaged=None
[2025-06-04 17:08:16]  is_tar=False
[2025-06-04 17:08:16]  lfn=log.45006595._049920.job.log.tgz.1
[2025-06-04 17:08:16]  mtime=0
[2025-06-04 17:08:16]  protocol_id=None
[2025-06-04 17:08:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:08:16]  replicas=None
[2025-06-04 17:08:16]  scope=mc23_13p6TeV
[2025-06-04 17:08:16]  status=None
[2025-06-04 17:08:16]  status_code=0
[2025-06-04 17:08:16]  storage_token=
[2025-06-04 17:08:16]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678246213/log.45006595._049920.job.log.tgz.1
[2025-06-04 17:08:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/e2/log.45006595._049920.job.log.tgz.1
[2025-06-04 17:08:16]  workdir=None
[2025-06-04 17:08:16] ]
[2025-06-04 17:08:16] 2025-06-04 15:07:59,262 | INFO     | transferring file log.45006595._049920.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678246213/log.45006595._049920.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 17:08:16] 2025-06-04 15:07:59,262 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678246213/log.45006595._049920.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0499
[2025-06-04 17:08:16] 2025-06-04 15:07:59,282 | INFO     | adding to output.list: log.45006595._049920.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/e2/log.45006595._049920.job.log.tg
[2025-06-04 17:08:16] 2025-06-04 15:07:59,282 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:08:16] 2025-06-04 15:07:59,282 | INFO     | summary of transferred files:
[2025-06-04 17:08:16] 2025-06-04 15:07:59,282 | INFO     |  -- lfn=log.45006595._049920.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:08:16] 2025-06-04 15:07:59,282 | INFO     | stage-out finished correctly
[2025-06-04 17:08:16] 2025-06-04 15:07:59,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:08:16] 2025-06-04 15:08:00,082 | INFO     | job 6678246213 has state=finished
[2025-06-04 17:08:16] 2025-06-04 15:08:00,083 | INFO     | preparing for final server update for job 6678246213 in state='finished'
[2025-06-04 17:08:16] 2025-06-04 15:08:00,083 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:08:16] 2025-06-04 15:08:00,083 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:08:16] 2025-06-04 15:08:00,083 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:08:16] 2025-06-04 15:08:00,083 | INFO     | job 6678246213 has finished - writing final server update
[2025-06-04 17:08:16] 2025-06-04 15:08:00,083 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:08:16] 2025-06-04 15:08:00,085 | INFO     | executing command: lscpu
[2025-06-04 17:08:16] 2025-06-04 15:08:00,107 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:08:16] 2025-06-04 15:08:01,255 | WARNING  | process 3454942 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:08:16] 2025-06-04 15:08:01,255 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678246213/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:08:16] 2025-06-04 15:08:01,316 | INFO     | number of running child processes to parent process 3454942: 1
[2025-06-04 17:08:16] 2025-06-04 15:08:01,316 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:08:16] 2025-06-04 15:08:03,622 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:08:16] 2025-06-04 15:08:03,623 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678246213/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:08:16] 2025-06-04 15:08:03,623 | INFO     | extracted standard info from prmon json
[2025-06-04 17:08:16] 2025-06-04 15:08:03,623 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:08:16] 2025-06-04 15:08:03,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:08:16] 2025-06-04 15:08:03,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:08:16] 2025-06-04 15:08:03,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | sum of deviations: -6089564669.0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | mean x: 1749047885.0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | mean y: 2496539.4
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | -- intersect: 206523889780.0798
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | intersect: 206523889780.0798
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | chi2: 0.048696785718123074
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | -- intersect: 206523889780.0798
[2025-06-04 17:08:16] 2025-06-04 15:08:03,624 | INFO     | current memory leak: -118.08 B/s (using 55 data points, chi2=0.05)
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | ..............................
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . Timing measurements:
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . get job = 0 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . initial setup = 1 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . payload setup = 5 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . stage-in = 0 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . payload execution = 3745 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . stage-out = 0 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | . log creation = 0 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,625 | INFO     | ..............................
[2025-06-04 17:08:16] 2025-06-04 15:08:03,666 | INFO     | 
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | job summary report
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | --------------------------------------------------
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | PanDA job id: 6678246213
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | task id: 45006595
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | errors: (none)
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | pilot state: finished 
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | transexitcode: 0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | exeerrorcode: 0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | exeerrordiag: 
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | exitcode: 0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | exitmsg: OK
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | cpuconsumptiontime: 14160 s
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | nevents: 400
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | neventsw: 0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | pid: 3454942
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | pgrp: 3454942
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | corecount: 4
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | event service: False
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | sizes: {0: 2397345, 3: 2397551, 10: 2397579, 3754: 2423347, 3755: 2423346, 3756: 2432349, 3757: 2432533, 3760: 2432703}
[2025-06-04 17:08:16] 2025-06-04 15:08:03,667 | INFO     | --------------------------------------------------
[2025-06-04 17:08:16] 2025-06-04 15:08:03,668 | INFO     | 
[2025-06-04 17:08:16] 2025-06-04 15:08:03,668 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | job 6678246213 has completed (purged errors)
[2025-06-04 17:08:16] 2025-06-04 15:08:03,688 | INFO     | overall cleanup function is called
[2025-06-04 17:08:16] 2025-06-04 15:08:04,695 | INFO     | --- collectZombieJob: --- 10, [3454942]
[2025-06-04 17:08:16] 2025-06-04 15:08:04,695 | INFO     | zombie collector waiting for pid 3454942
[2025-06-04 17:08:16] 2025-06-04 15:08:04,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:08:16] 2025-06-04 15:08:04,695 | INFO     | collected zombie processes
[2025-06-04 17:08:16] 2025-06-04 15:08:04,695 | INFO     | will attempt to kill all subprocesses of pid=3454942
[2025-06-04 17:08:16] 2025-06-04 15:08:04,741 | INFO     | process IDs to be killed: [3454942] (in reverse order)
[2025-06-04 17:08:16] 2025-06-04 15:08:04,775 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:08:16] 2025-06-04 15:08:04,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:08:16] 2025-06-04 15:08:04,778 | INFO     | did not find any defunct processes belonging to 3454942
[2025-06-04 17:08:16] 2025-06-04 15:08:04,779 | INFO     | did not find any defunct processes belonging to 3454942
[2025-06-04 17:08:16] 2025-06-04 15:08:04,779 | INFO     | ready for new job
[2025-06-04 17:08:16] 2025-06-04 15:08:04,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:08:16] 2025-06-04 15:08:04,780 | INFO     | **************************************
[2025-06-04 17:08:16] 2025-06-04 15:08:04,780 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:08:16] 2025-06-04 15:08:04,780 | INFO     | **************************************
[2025-06-04 17:08:16] 2025-06-04 15:08:04,780 | INFO     | 
[2025-06-04 17:08:16] 2025-06-04 15:08:04,780 | INFO     | architecture information:
[2025-06-04 17:08:16] 2025-06-04 15:08:04,781 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:08:16] 2025-06-04 15:08:04,795 | INFO     | cat /etc/os-release:
[2025-06-04 17:08:16] NAME="CentOS Linux"
[2025-06-04 17:08:16] VERSION="7 (Core)"
[2025-06-04 17:08:16] ID="centos"
[2025-06-04 17:08:16] ID_LIKE="rhel fedora"
[2025-06-04 17:08:16] VERSION_ID="7"
[2025-06-04 17:08:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:08:16] ANSI_COLOR="0;31"
[2025-06-04 17:08:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:08:16] HOME_URL="https://www.centos.org/"
[2025-06-04 17:08:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:08:16] 
[2025-06-04 17:08:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:08:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:08:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:08:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:08:16] 
[2025-06-04 17:08:16] 2025-06-04 15:08:04,795 | INFO     | **************************************
[2025-06-04 17:08:16] 2025-06-04 15:08:05,299 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 17:08:16] 2025-06-04 15:08:05,318 | INFO     | sufficient remaining disk space (323345186816 B)
[2025-06-04 17:08:16] 2025-06-04 15:08:05,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:08:16] 2025-06-04 15:08:05,318 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:08:16] 2025-06-04 15:08:05,318 | INFO     | update_server=False
[2025-06-04 17:08:16] 2025-06-04 15:08:05,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:08:16] 2025-06-04 15:08:05,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:08:16] 2025-06-04 15:08:05,319 | INFO     | aborting loop
[2025-06-04 17:08:16] 2025-06-04 15:08:05,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:08:16] 2025-06-04 15:08:05,874 | INFO     | all payload control threads have been joined
[2025-06-04 17:08:16] 2025-06-04 15:08:06,324 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,325 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,325 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,370 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,411 | INFO     | all data control threads have been joined
[2025-06-04 17:08:16] 2025-06-04 15:08:06,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,727 | INFO     | all job control threads have been joined
[2025-06-04 17:08:16] 2025-06-04 15:08:06,880 | INFO     | [payload] control thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,903 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:06,910 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,314 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,324 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,417 | INFO     | [data] control thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,600 | INFO     | [job] validate thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,672 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,733 | INFO     | [job] control thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:07,747 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:09,787 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:08:16] 2025-06-04 15:08:11,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018410567488)>', '<ExcThread(monitor, started 140017452173056)>']
[2025-06-04 17:08:16] 2025-06-04 15:08:11,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:08:16] 2025-06-04 15:08:11,347 | INFO     | [monitor] control thread has ended
[2025-06-04 17:08:16] 2025-06-04 15:08:16,296 | INFO     | all workflow threads have been joined
[2025-06-04 17:08:16] 2025-06-04 15:08:16,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:08:16] 2025-06-04 15:08:16,298 | INFO     | traces error code: 0
[2025-06-04 17:08:16] 2025-06-04 15:08:16,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:08:16] 2025-06-04 15:08:16,379 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:08:16] 2025-06-04 15:08:16,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:08:16] 2025-06-04 15:08:16,387 [wrapper] pilotpid: 3448321
[2025-06-04 17:08:16] 2025-06-04 15:08:16,392 [wrapper] Pilot exit status: 0
[2025-06-04 17:08:16] 2025-06-04 15:08:16,404 [wrapper] pandaids: 6678246213
[2025-06-04 17:08:16] 2025-06-04 15:08:16,428 [wrapper] cleanup supervisor_pilot 3464594 3448322
[2025-06-04 17:08:16] 2025-06-04 15:08:16,432 [wrapper] Test setup, not cleaning
[2025-06-04 17:08:16] 2025-06-04 15:08:16,436 [wrapper] apfmon messages muted
[2025-06-04 17:08:16] 2025-06-04 15:08:16,440 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:08:16] 2025-06-04 15:08:16,444 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:08:16]  *** Error codes and diagnostics ***
[2025-06-04 17:08:16]     "exeErrorCode": 0,
[2025-06-04 17:08:16]     "exeErrorDiag": "",
[2025-06-04 17:08:16]     "pilotErrorCode": 0,
[2025-06-04 17:08:16]     "pilotErrorDiag": "",
[2025-06-04 17:08:16]  *** Listing of results directory ***
[2025-06-04 17:08:16] total 389432
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:50 queuedata.json
[2025-06-04 17:08:16] -rwx------ 1 boinc boinc     37140 Jun  4 03:52 runpilot2-wrapper.sh
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:08:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:05 run_atlas
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:05 job.xml
[2025-06-04 17:08:16] -rw-r--r-- 2 boinc boinc 215376414 Jun  4 16:05 EVNT.45006593._002001.pool.root.1
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc      6863 Jun  4 16:05 init_data.xml
[2025-06-04 17:08:16] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:05 shared
[2025-06-04 17:08:16] -rw-r--r-- 2 boinc boinc    508886 Jun  4 16:05 input.tar.gz
[2025-06-04 17:08:16] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:05 start_atlas.sh
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:05 boinc_lockfile
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc      2525 Jun  4 16:05 pandaJob.out
[2025-06-04 17:08:16] -rw------- 1 boinc boinc    986819 Jun  4 16:05 agis_schedconf.cvmfs.json
[2025-06-04 17:08:16] -rw------- 1 boinc boinc   1598969 Jun  4 16:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:08:16] drwx------ 4 boinc boinc      4096 Jun  4 16:05 pilot3
[2025-06-04 17:08:16] -rw------- 1 boinc boinc        95 Jun  4 17:07 pilot_heartbeat.json
[2025-06-04 17:08:16] -rw------- 1 boinc boinc 178315116 Jun  4 17:07 HITS.45006595._049920.pool.root.1
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:07 boinc_task_state.xml
[2025-06-04 17:08:16] -rw------- 1 boinc boinc      1021 Jun  4 17:07 memory_monitor_summary.json
[2025-06-04 17:08:16] -rw------- 1 boinc boinc    246816 Jun  4 17:07 log.45006595._049920.job.log.tgz.1
[2025-06-04 17:08:16] -rw------- 1 boinc boinc      7670 Jun  4 17:08 heartbeat.json
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:08 boinc_mmap_file
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:08 wrapper_checkpoint.txt
[2025-06-04 17:08:16] -rw------- 1 boinc boinc      4480 Jun  4 17:08 pilotlog.txt
[2025-06-04 17:08:16] -rw------- 1 boinc boinc    379124 Jun  4 17:08 log.45006595._049920.job.log.1
[2025-06-04 17:08:16] -rw------- 1 boinc boinc       357 Jun  4 17:08 output.list
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:08 runtime_log
[2025-06-04 17:08:16] -rw------- 1 boinc boinc    645120 Jun  4 17:08 result.tar.gz
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc      8753 Jun  4 17:08 runtime_log.err
[2025-06-04 17:08:16] -rw------- 1 boinc boinc       662 Jun  4 17:08 khANDmnTsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUmmKDmgnZ6jn.diag
[2025-06-04 17:08:16] -rw-r--r-- 1 boinc boinc     21151 Jun  4 17:08 stderr.txt
[2025-06-04 17:08:16] HITS file was successfully produced:
[2025-06-04 17:08:16] -rw------- 1 boinc boinc 178315116 Jun  4 17:07 shared/HITS.pool.root.1
[2025-06-04 17:08:16]  *** Contents of shared directory: ***
[2025-06-04 17:08:16] total 385624
[2025-06-04 17:08:16] -rw-r--r-- 2 boinc boinc 215376414 Jun  4 16:05 ATLAS.root_0
[2025-06-04 17:08:16] -rw-r--r-- 2 boinc boinc    508886 Jun  4 16:05 input.tar.gz
[2025-06-04 17:08:16] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:05 start_atlas.sh
[2025-06-04 17:08:16] -rw------- 1 boinc boinc 178315116 Jun  4 17:07 HITS.pool.root.1
[2025-06-04 17:08:16] -rw------- 1 boinc boinc    645120 Jun  4 17:08 result.tar.gz
17:08:18 (3444613): run_atlas exited; CPU time 14168.197505
17:08:18 (3444613): called boinc_finish(0)

</stderr_txt>
]]>

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