Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:03:03 (1252855): wrapper (7.7.26015): starting
17:03:03 (1252855): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 17:03:03] Arguments: --nthreads 3
[2025-06-04 17:03:03] Threads: 3
[2025-06-04 17:03:03] Checking for CVMFS
[2025-06-04 17:03:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:03:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:03:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:03:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:03:03] 2.9.2.0 295523 2819 82608 146783 0 56 31845617 36864001 0 130560 0 2600541 99.992 680714 44745 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 17:03:03] CVMFS is ok
[2025-06-04 17:03:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:03:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:03:03] Further information can be found at the LHC@home message board.
[2025-06-04 17:03:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:03:03] Checking for apptainer binary...
[2025-06-04 17:03:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:03:03] Running /usr/bin/apptainer --version
[2025-06-04 17:03:03] apptainer version 1.3.6-6.1
[2025-06-04 17:03:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:03:03] thA335b
[2025-06-04 17:03:03] apptainer works
[2025-06-04 17:03:03] Set ATHENA_PROC_NUMBER=3
[2025-06-04 17:03:03] Set ATHENA_CORE_NUMBER=3
[2025-06-04 17:03:03] Starting ATLAS job with PandaID=6678246375
[2025-06-04 17:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:18:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:18:10]  guid=ce7dfbc1-3414-4272-a670-59e19321f3ac
[2025-06-04 18:18:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 18:18:10]  is_altstaged=None
[2025-06-04 18:18:10]  is_tar=False
[2025-06-04 18:18:10]  lfn=log.45006595._050082.job.log.tgz.1
[2025-06-04 18:18:10]  mtime=0
[2025-06-04 18:18:10]  protocol_id=None
[2025-06-04 18:18:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:18:10]  replicas=None
[2025-06-04 18:18:10]  scope=mc23_13p6TeV
[2025-06-04 18:18:10]  status=None
[2025-06-04 18:18:10]  status_code=0
[2025-06-04 18:18:10]  storage_token=
[2025-06-04 18:18:10]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678246375/log.45006595._050082.job.log.tgz.1
[2025-06-04 18:18:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/2f/log.45006595._050082.job.log.tgz.1
[2025-06-04 18:18:10]  workdir=None
[2025-06-04 18:18:10] ]
[2025-06-04 18:18:10] 2025-06-04 16:17:25,577 | INFO     | transferring file log.45006595._050082.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678246375/log.45006595._050082.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 18:18:10] 2025-06-04 16:17:25,577 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678246375/log.45006595._050082.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0500
[2025-06-04 18:18:10] 2025-06-04 16:17:25,591 | INFO     | adding to output.list: log.45006595._050082.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/2f/log.45006595._050082.job.log.tg
[2025-06-04 18:18:10] 2025-06-04 16:17:25,592 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:18:10] 2025-06-04 16:17:25,592 | INFO     | summary of transferred files:
[2025-06-04 18:18:10] 2025-06-04 16:17:25,592 | INFO     |  -- lfn=log.45006595._050082.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:18:10] 2025-06-04 16:17:25,592 | INFO     | stage-out finished correctly
[2025-06-04 18:18:10] 2025-06-04 16:17:25,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:18:10] 2025-06-04 16:17:25,650 | INFO     | job 6678246375 has state=finished
[2025-06-04 18:18:10] 2025-06-04 16:17:25,650 | INFO     | preparing for final server update for job 6678246375 in state='finished'
[2025-06-04 18:18:10] 2025-06-04 16:17:25,650 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:18:10] 2025-06-04 16:17:25,650 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:18:10] 2025-06-04 16:17:25,651 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:18:10] 2025-06-04 16:17:25,651 | INFO     | job 6678246375 has finished - writing final server update
[2025-06-04 18:18:10] 2025-06-04 16:17:25,651 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:18:10] 2025-06-04 16:17:25,652 | INFO     | executing command: lscpu
[2025-06-04 18:18:10] 2025-06-04 16:17:25,666 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:18:10] 2025-06-04 16:17:26,753 | WARNING  | process 1262992 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 18:18:10] 2025-06-04 16:17:26,753 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678246375/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:18:10] 2025-06-04 16:17:26,808 | INFO     | number of running child processes to parent process 1262992: 1
[2025-06-04 18:18:10] 2025-06-04 16:17:26,808 | INFO     | maximum number of monitored processes: 6
[2025-06-04 18:18:10] 2025-06-04 16:17:29,310 | INFO     | monitor loop #344: job 0:6678246375 is in state 'finished'
[2025-06-04 18:18:10] 2025-06-04 16:17:29,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:18:10] 2025-06-04 16:17:29,326 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 18:18:10] 2025-06-04 16:17:29,326 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678246375/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:18:10] 2025-06-04 16:17:29,326 | INFO     | extracted standard info from prmon json
[2025-06-04 18:18:10] 2025-06-04 16:17:29,326 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:18:10] 2025-06-04 16:17:29,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:18:10] 2025-06-04 16:17:29,326 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | INFO     | sum of deviations: -5410163932.0
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | INFO     | mean x: 1749051696.5
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | INFO     | mean y: 2417748.1818181816
[2025-06-04 18:18:10] 2025-06-04 16:17:29,327 | INFO     | -- intersect: 106172597330.54594
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | intersect: 106172597330.54594
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | chi2: 0.06111282598259766
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | -- intersect: 106172597330.54594
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | current memory leak: -60.70 B/s (using 66 data points, chi2=0.06)
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | ..............................
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . Timing measurements:
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . get job = 0 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . initial setup = 1 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . payload setup = 3 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . stage-in = 0 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . payload execution = 4436 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . stage-out = 0 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | . log creation = 0 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,328 | INFO     | ..............................
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | 
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | job summary report
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | --------------------------------------------------
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | PanDA job id: 6678246375
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | task id: 45006595
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | errors: (none)
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | pilot state: finished 
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | transexitcode: 0
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | exeerrorcode: 0
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | exeerrordiag: 
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | exitcode: 0
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | exitmsg: OK
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | cpuconsumptiontime: 12663 s
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | nevents: 400
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | neventsw: 0
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | pid: 1262992
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | pgrp: 1262992
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | corecount: 3
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | event service: False
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | sizes: {0: 2397294, 3: 2397500, 11: 2397528, 4443: 2432607, 4447: 2432721}
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | --------------------------------------------------
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | 
[2025-06-04 18:18:10] 2025-06-04 16:17:29,359 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | job 6678246375 has completed (purged errors)
[2025-06-04 18:18:10] 2025-06-04 16:17:29,373 | INFO     | overall cleanup function is called
[2025-06-04 18:18:10] 2025-06-04 16:17:30,380 | INFO     | --- collectZombieJob: --- 10, [1262992]
[2025-06-04 18:18:10] 2025-06-04 16:17:30,380 | INFO     | zombie collector waiting for pid 1262992
[2025-06-04 18:18:10] 2025-06-04 16:17:30,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:18:10] 2025-06-04 16:17:30,380 | INFO     | collected zombie processes
[2025-06-04 18:18:10] 2025-06-04 16:17:30,381 | INFO     | will attempt to kill all subprocesses of pid=1262992
[2025-06-04 18:18:10] 2025-06-04 16:17:30,422 | INFO     | process IDs to be killed: [1262992] (in reverse order)
[2025-06-04 18:18:10] 2025-06-04 16:17:30,447 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:18:10] 2025-06-04 16:17:30,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:18:10] 2025-06-04 16:17:30,448 | INFO     | did not find any defunct processes belonging to 1262992
[2025-06-04 18:18:10] 2025-06-04 16:17:30,449 | INFO     | did not find any defunct processes belonging to 1262992
[2025-06-04 18:18:10] 2025-06-04 16:17:30,449 | INFO     | ready for new job
[2025-06-04 18:18:10] 2025-06-04 16:17:30,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:18:10] 2025-06-04 16:17:30,450 | INFO     | **************************************
[2025-06-04 18:18:10] 2025-06-04 16:17:30,450 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:18:10] 2025-06-04 16:17:30,450 | INFO     | **************************************
[2025-06-04 18:18:10] 2025-06-04 16:17:30,450 | INFO     | 
[2025-06-04 18:18:10] 2025-06-04 16:17:30,450 | INFO     | architecture information:
[2025-06-04 18:18:10] 2025-06-04 16:17:30,451 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:18:10] 2025-06-04 16:17:30,460 | INFO     | cat /etc/os-release:
[2025-06-04 18:18:10] NAME="CentOS Linux"
[2025-06-04 18:18:10] VERSION="7 (Core)"
[2025-06-04 18:18:10] ID="centos"
[2025-06-04 18:18:10] ID_LIKE="rhel fedora"
[2025-06-04 18:18:10] VERSION_ID="7"
[2025-06-04 18:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:18:10] ANSI_COLOR="0;31"
[2025-06-04 18:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:18:10] HOME_URL="https://www.centos.org/"
[2025-06-04 18:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:18:10] 
[2025-06-04 18:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:18:10] 
[2025-06-04 18:18:10] 2025-06-04 16:17:30,460 | INFO     | **************************************
[2025-06-04 18:18:10] 2025-06-04 16:17:30,963 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 18:18:10] 2025-06-04 16:17:30,977 | INFO     | sufficient remaining disk space (368714973184 B)
[2025-06-04 18:18:10] 2025-06-04 16:17:30,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:18:10] 2025-06-04 16:17:30,977 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:18:10] 2025-06-04 16:17:30,977 | INFO     | update_server=False
[2025-06-04 18:18:10] 2025-06-04 16:17:30,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:18:10] 2025-06-04 16:17:30,977 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:18:10] 2025-06-04 16:17:30,978 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:18:10] 2025-06-04 16:17:30,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:18:10] 2025-06-04 16:17:30,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:18:10] 2025-06-04 16:17:30,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:18:10] 2025-06-04 16:17:30,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:18:10] 2025-06-04 16:17:30,978 | INFO     | aborting loop
[2025-06-04 18:18:10] 2025-06-04 16:17:31,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:18:10] 2025-06-04 16:17:31,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:18:10] 2025-06-04 16:17:31,981 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:31,983 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:31,983 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:31,986 | INFO     | all data control threads have been joined
[2025-06-04 18:18:10] 2025-06-04 16:17:32,104 | INFO     | all payload control threads have been joined
[2025-06-04 18:18:10] 2025-06-04 16:17:32,296 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:32,483 | INFO     | all job control threads have been joined
[2025-06-04 18:18:10] 2025-06-04 16:17:32,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:32,721 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:32,727 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:32,922 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:32,991 | INFO     | [data] control thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:33,110 | INFO     | [payload] control thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:33,131 | INFO     | [job] validate thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:33,137 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:33,209 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:33,248 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:33,489 | INFO     | [job] control thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:35,664 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:18:10] 2025-06-04 16:17:36,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681545713472)>', '<ExcThread(monitor, started 139680926398208)>']
[2025-06-04 18:18:10] 2025-06-04 16:17:37,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:18:10] 2025-06-04 16:17:37,010 | INFO     | [monitor] control thread has ended
[2025-06-04 18:18:10] 2025-06-04 16:17:41,140 | INFO     | all workflow threads have been joined
[2025-06-04 18:18:10] 2025-06-04 16:17:41,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:18:10] 2025-06-04 16:17:41,141 | INFO     | traces error code: 0
[2025-06-04 18:18:10] 2025-06-04 16:17:41,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:18:10] 2025-06-04 16:17:41,191 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:18:10] 2025-06-04 16:17:41,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:18:10] 2025-06-04 16:17:41,196 [wrapper] pilotpid: 1256490
[2025-06-04 18:18:10] 2025-06-04 16:17:41,199 [wrapper] Pilot exit status: 0
[2025-06-04 18:18:10] 2025-06-04 16:17:41,207 [wrapper] pandaids: 6678246375
[2025-06-04 18:18:10] 2025-06-04 16:17:41,223 [wrapper] cleanup supervisor_pilot 1272331 1256491
[2025-06-04 18:18:10] 2025-06-04 16:17:41,226 [wrapper] Test setup, not cleaning
[2025-06-04 18:18:10] 2025-06-04 16:17:41,229 [wrapper] apfmon messages muted
[2025-06-04 18:18:10] 2025-06-04 16:17:41,231 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:18:10] 2025-06-04 16:17:41,233 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:18:10]  *** Error codes and diagnostics ***
[2025-06-04 18:18:10]     "exeErrorCode": 0,
[2025-06-04 18:18:10]     "exeErrorDiag": "",
[2025-06-04 18:18:10]     "pilotErrorCode": 0,
[2025-06-04 18:18:10]     "pilotErrorDiag": "",
[2025-06-04 18:18:10]  *** Listing of results directory ***
[2025-06-04 18:18:10] total 392184
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:00 queuedata.json
[2025-06-04 18:18:10] -rwx------ 1 boinc boinc     37140 Jun  4 04:00 runpilot2-wrapper.sh
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:18:10] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:03 run_atlas
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:03 job.xml
[2025-06-04 18:18:10] -rw-r--r-- 2 boinc boinc 213591552 Jun  4 17:03 EVNT.45006593._002008.pool.root.1
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc      6930 Jun  4 17:03 init_data.xml
[2025-06-04 18:18:10] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:03 shared
[2025-06-04 18:18:10] -rw-r--r-- 2 boinc boinc    508869 Jun  4 17:03 input.tar.gz
[2025-06-04 18:18:10] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:03 start_atlas.sh
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:03 boinc_lockfile
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc      2524 Jun  4 17:03 pandaJob.out
[2025-06-04 18:18:10] -rw------- 1 boinc boinc    987207 Jun  4 17:03 agis_schedconf.cvmfs.json
[2025-06-04 18:18:10] -rw------- 1 boinc boinc   1598969 Jun  4 17:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:18:10] drwx------ 4 boinc boinc      4096 Jun  4 17:03 pilot3
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc       529 Jun  4 18:17 boinc_task_state.xml
[2025-06-04 18:18:10] -rw------- 1 boinc boinc 182849612 Jun  4 18:17 HITS.45006595._050082.pool.root.1
[2025-06-04 18:18:10] -rw------- 1 boinc boinc      1015 Jun  4 18:17 memory_monitor_summary.json
[2025-06-04 18:18:10] -rw------- 1 boinc boinc    220974 Jun  4 18:17 log.45006595._050082.job.log.tgz.1
[2025-06-04 18:18:10] -rw------- 1 boinc boinc      7647 Jun  4 18:17 heartbeat.json
[2025-06-04 18:18:10] -rw------- 1 boinc boinc        95 Jun  4 18:17 pilot_heartbeat.json
[2025-06-04 18:18:10] -rw------- 1 boinc boinc      4480 Jun  4 18:17 pilotlog.txt
[2025-06-04 18:18:10] -rw------- 1 boinc boinc    438374 Jun  4 18:17 log.45006595._050082.job.log.1
[2025-06-04 18:18:10] -rw------- 1 boinc boinc       357 Jun  4 18:17 output.list
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:17 runtime_log
[2025-06-04 18:18:10] -rw------- 1 boinc boinc    675840 Jun  4 18:17 result.tar.gz
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc      8738 Jun  4 18:17 runtime_log.err
[2025-06-04 18:18:10] -rw------- 1 boinc boinc       659 Jun  4 18:17 opdLDmMbsg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxTaKDmQaOnwm.diag
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:18 boinc_mmap_file
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc     21294 Jun  4 18:18 stderr.txt
[2025-06-04 18:18:10] -rw-r--r-- 1 boinc boinc        27 Jun  4 18:18 wrapper_checkpoint.txt
[2025-06-04 18:18:10] HITS file was successfully produced:
[2025-06-04 18:18:10] -rw------- 1 boinc boinc 182849612 Jun  4 18:17 shared/HITS.pool.root.1
[2025-06-04 18:18:10]  *** Contents of shared directory: ***
[2025-06-04 18:18:10] total 388340
[2025-06-04 18:18:10] -rw-r--r-- 2 boinc boinc 213591552 Jun  4 17:03 ATLAS.root_0
[2025-06-04 18:18:10] -rw-r--r-- 2 boinc boinc    508869 Jun  4 17:03 input.tar.gz
[2025-06-04 18:18:10] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:03 start_atlas.sh
[2025-06-04 18:18:10] -rw------- 1 boinc boinc 182849612 Jun  4 18:17 HITS.pool.root.1
[2025-06-04 18:18:10] -rw------- 1 boinc boinc    675840 Jun  4 18:17 result.tar.gz
18:18:12 (1252855): run_atlas exited; CPU time 12676.017018
18:18:12 (1252855): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN