Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:52 (20417): wrapper (7.7.26015): starting
16:54:52 (20417): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:54:53] Arguments: --nthreads 8
[2025-06-04 16:54:53] Threads: 8
[2025-06-04 16:54:53] Checking for CVMFS
[2025-06-04 16:54:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:54:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:54:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:54:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:54:55] 2.11.2.0 18352 33536 93952 146783 1 159 12706570 25165825 3245 130560 0 17957466 99.786 20281040 4416 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 16:54:55] CVMFS is ok
[2025-06-04 16:54:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:54:55] Checking for apptainer binary...
[2025-06-04 16:54:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:54:55] Running /usr/bin/apptainer --version
[2025-06-04 16:54:55] apptainer version 1.3.2-1.el7
[2025-06-04 16:54:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:55:06] cg-vwn313.simple-grid.lan
[2025-06-04 16:55:06] apptainer works
[2025-06-04 16:55:06] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:55:06] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:55:07] Starting ATLAS job with PandaID=6678313268
[2025-06-04 16:55:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:45:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:45:34] 2025-06-04 18:54:59,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:45:34] 2025-06-04 18:54:59,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:45:34] 2025-06-04 18:54:59,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:45:34] 2025-06-04 18:54:59,328 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:45:34] 2025-06-04 18:54:59,329 | INFO     | sum of square deviations: 3972995422.5
[2025-06-04 21:45:34] 2025-06-04 18:54:59,331 | INFO     | sum of deviations: -1479525323.4999943
[2025-06-04 21:45:34] 2025-06-04 18:54:59,331 | INFO     | mean x: 1749056088.5
[2025-06-04 21:45:34] 2025-06-04 18:54:59,332 | INFO     | mean y: 2486364.653846154
[2025-06-04 21:45:34] 2025-06-04 18:54:59,332 | INFO     | -- intersect: 653826852.1113539
[2025-06-04 21:45:34] 2025-06-04 18:54:59,332 | INFO     | intersect: 653826852.1113539
[2025-06-04 21:45:34] 2025-06-04 18:54:59,332 | INFO     | chi2: 2.578261493631887
[2025-06-04 21:45:34] 2025-06-04 18:54:59,333 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,335 | INFO     | sum of deviations: 13734601826.999989
[2025-06-04 21:45:34] 2025-06-04 18:54:59,335 | INFO     | mean x: 1749055936.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,335 | INFO     | mean y: 2495507.497816594
[2025-06-04 21:45:34] 2025-06-04 18:54:59,335 | INFO     | -- intersect: -6448744255.470587
[2025-06-04 21:45:34] 2025-06-04 18:54:59,335 | INFO     | intersect: -6448744255.470587
[2025-06-04 21:45:34] 2025-06-04 18:54:59,336 | INFO     | chi2: 1.8102423668549488
[2025-06-04 21:45:34] 2025-06-04 18:54:59,336 | INFO     | current chi2=1.8102423668549488 (change=29.788255717035987 %)
[2025-06-04 21:45:34] 2025-06-04 18:54:59,337 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,339 | INFO     | sum of deviations: 13292876121.999998
[2025-06-04 21:45:34] 2025-06-04 18:54:59,339 | INFO     | mean x: 1749055783.5
[2025-06-04 21:45:34] 2025-06-04 18:54:59,339 | INFO     | mean y: 2495225.7053571427
[2025-06-04 21:45:34] 2025-06-04 18:54:59,339 | INFO     | -- intersect: -6668779031.291479
[2025-06-04 21:45:34] 2025-06-04 18:54:59,339 | INFO     | intersect: -6668779031.291479
[2025-06-04 21:45:34] 2025-06-04 18:54:59,340 | INFO     | chi2: 1.8109024674596683
[2025-06-04 21:45:34] 2025-06-04 18:54:59,340 | INFO     | current chi2=1.8109024674596683 (change=-0.0364647638794569 %)
[2025-06-04 21:45:34] 2025-06-04 18:54:59,340 | INFO     | right removable region: 223
[2025-06-04 21:45:34] 2025-06-04 18:54:59,341 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,343 | INFO     | sum of deviations: -42062050898.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,343 | INFO     | mean x: 1749056241.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,343 | INFO     | mean y: 2510990.868995633
[2025-06-04 21:45:34] 2025-06-04 18:54:59,343 | INFO     | -- intersect: 19759357676.45059
[2025-06-04 21:45:34] 2025-06-04 18:54:59,343 | INFO     | intersect: 19759357676.45059
[2025-06-04 21:45:34] 2025-06-04 18:54:59,344 | INFO     | chi2: 0.9522402585325541
[2025-06-04 21:45:34] 2025-06-04 18:54:59,344 | INFO     | current chi2=0.9522402585325541 (change=63.066575640813916 %)
[2025-06-04 21:45:34] 2025-06-04 18:54:59,344 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,346 | INFO     | sum of deviations: -37424831264.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,347 | INFO     | mean x: 1749056393.5
[2025-06-04 21:45:34] 2025-06-04 18:54:59,347 | INFO     | mean y: 2508001.660714286
[2025-06-04 21:45:34] 2025-06-04 18:54:59,347 | INFO     | -- intersect: 18784854137.12421
[2025-06-04 21:45:34] 2025-06-04 18:54:59,347 | INFO     | intersect: 18784854137.12421
[2025-06-04 21:45:34] 2025-06-04 18:54:59,347 | INFO     | chi2: 0.9379854632930318
[2025-06-04 21:45:34] 2025-06-04 18:54:59,348 | INFO     | current chi2=0.9379854632930318 (change=1.496974646029945 %)
[2025-06-04 21:45:34] 2025-06-04 18:54:59,348 | INFO     | left removable region: 20
[2025-06-04 21:45:34] 2025-06-04 18:54:59,348 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,350 | INFO     | sum of deviations: -6986400515.999998
[2025-06-04 21:45:34] 2025-06-04 18:54:59,350 | INFO     | mean x: 1749056363.0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,350 | INFO     | mean y: 2507170.8571428573
[2025-06-04 21:45:34] 2025-06-04 18:54:59,350 | INFO     | -- intersect: 4713378966.121047
[2025-06-04 21:45:34] 2025-06-04 18:54:59,350 | INFO     | intersect: 4713378966.121047
[2025-06-04 21:45:34] 2025-06-04 18:54:59,351 | INFO     | chi2: 0.0855289807154322
[2025-06-04 21:45:34] 2025-06-04 18:54:59,351 | INFO     | -- intersect: 4713378966.121047
[2025-06-04 21:45:34] 2025-06-04 18:54:59,351 | INFO     | current memory leak: -2.69 B/s (using 203 data points, chi2=0.09)
[2025-06-04 21:45:34] 2025-06-04 18:54:59,352 | INFO     | ..............................
[2025-06-04 21:45:34] 2025-06-04 18:54:59,352 | INFO     | . Timing measurements:
[2025-06-04 21:45:34] 2025-06-04 18:54:59,352 | INFO     | . get job = 0 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,352 | INFO     | . initial setup = 2 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,352 | INFO     | . payload setup = 13 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,352 | INFO     | . stage-in = 0 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,353 | INFO     | . payload execution = 14242 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,353 | INFO     | . stage-out = 3 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,353 | INFO     | . log creation = 1 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,353 | INFO     | ..............................
[2025-06-04 21:45:34] 2025-06-04 18:54:59,756 | INFO     | 
[2025-06-04 21:45:34] 2025-06-04 18:54:59,757 | INFO     | job summary report
[2025-06-04 21:45:34] 2025-06-04 18:54:59,757 | INFO     | --------------------------------------------------
[2025-06-04 21:45:34] 2025-06-04 18:54:59,757 | INFO     | PanDA job id: 6678313268
[2025-06-04 21:45:34] 2025-06-04 18:54:59,757 | INFO     | task id: 45006595
[2025-06-04 21:45:34] 2025-06-04 18:54:59,757 | INFO     | errors: (none)
[2025-06-04 21:45:34] 2025-06-04 18:54:59,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:45:34] 2025-06-04 18:54:59,760 | INFO     | pilot state: finished 
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | transexitcode: 0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | exeerrorcode: 0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | exeerrordiag: 
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | exitcode: 0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | exitmsg: OK
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | cpuconsumptiontime: 53536 s
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | nevents: 400
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | neventsw: 0
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | pid: 32632
[2025-06-04 21:45:34] 2025-06-04 18:54:59,761 | INFO     | pgrp: 32632
[2025-06-04 21:45:34] 2025-06-04 18:54:59,762 | INFO     | corecount: 8
[2025-06-04 21:45:34] 2025-06-04 18:54:59,762 | INFO     | event service: False
[2025-06-04 21:45:34] 2025-06-04 18:54:59,762 | INFO     | sizes: {0: 2397172, 1: 2397371, 10: 2397577, 12: 2397605, 14257: 2427434, 14258: 2427433, 14262: 2436616, 14352: 2436730}
[2025-06-04 21:45:34] 2025-06-04 18:54:59,762 | INFO     | --------------------------------------------------
[2025-06-04 21:45:34] 2025-06-04 18:54:59,762 | INFO     | 
[2025-06-04 21:45:34] 2025-06-04 18:54:59,762 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 21:45:34] 2025-06-04 18:55:00,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,132 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:45:34] 2025-06-04 18:55:00,142 | INFO     | job 6678313268 has completed (purged errors)
[2025-06-04 21:45:34] 2025-06-04 18:55:00,142 | INFO     | overall cleanup function is called
[2025-06-04 21:45:34] 2025-06-04 18:55:01,151 | INFO     | --- collectZombieJob: --- 10, [32632]
[2025-06-04 21:45:34] 2025-06-04 18:55:01,152 | INFO     | zombie collector waiting for pid 32632
[2025-06-04 21:45:34] 2025-06-04 18:55:01,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:45:34] 2025-06-04 18:55:01,152 | INFO     | collected zombie processes
[2025-06-04 21:45:34] 2025-06-04 18:55:01,152 | INFO     | will attempt to kill all subprocesses of pid=32632
[2025-06-04 21:45:34] 2025-06-04 18:55:01,275 | INFO     | process IDs to be killed: [32632] (in reverse order)
[2025-06-04 21:45:34] 2025-06-04 18:55:01,934 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:45:34] 2025-06-04 18:55:01,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:45:34] 2025-06-04 18:55:01,939 | INFO     | did not find any defunct processes belonging to 32632
[2025-06-04 21:45:34] 2025-06-04 18:55:01,943 | INFO     | did not find any defunct processes belonging to 32632
[2025-06-04 21:45:34] 2025-06-04 18:55:01,943 | INFO     | ready for new job
[2025-06-04 21:45:34] 2025-06-04 18:55:01,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:45:34] 2025-06-04 18:55:01,946 | INFO     | **************************************
[2025-06-04 21:45:34] 2025-06-04 18:55:01,946 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:45:34] 2025-06-04 18:55:01,946 | INFO     | **************************************
[2025-06-04 21:45:34] 2025-06-04 18:55:01,946 | INFO     | 
[2025-06-04 21:45:34] 2025-06-04 18:55:01,947 | INFO     | pilot is running in a VM
[2025-06-04 21:45:34] 2025-06-04 18:55:01,951 | INFO     | architecture information:
[2025-06-04 21:45:34] 2025-06-04 18:55:01,970 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:45:34] 2025-06-04 18:55:02,139 | INFO     | cat /etc/os-release:
[2025-06-04 21:45:34] NAME="CentOS Linux"
[2025-06-04 21:45:34] VERSION="7 (Core)"
[2025-06-04 21:45:34] ID="centos"
[2025-06-04 21:45:34] ID_LIKE="rhel fedora"
[2025-06-04 21:45:34] VERSION_ID="7"
[2025-06-04 21:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:45:34] ANSI_COLOR="0;31"
[2025-06-04 21:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:45:34] HOME_URL="https://www.centos.org/"
[2025-06-04 21:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:45:34] 
[2025-06-04 21:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:45:34] 
[2025-06-04 21:45:34] 2025-06-04 18:55:02,139 | INFO     | **************************************
[2025-06-04 21:45:34] 2025-06-04 18:55:02,462 | INFO     | PID=24092 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 21:45:34] 2025-06-04 18:55:02,462 | INFO     | .. there are 9 such processes running
[2025-06-04 21:45:34] 2025-06-04 18:55:02,643 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 21:45:34] 2025-06-04 18:55:02,793 | INFO     | sufficient remaining disk space (497162387456 B)
[2025-06-04 21:45:34] 2025-06-04 18:55:02,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:45:34] 2025-06-04 18:55:02,794 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:45:34] 2025-06-04 18:55:02,794 | INFO     | update_server=False
[2025-06-04 21:45:34] 2025-06-04 18:55:02,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:45:34] 2025-06-04 18:55:02,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:45:34] 2025-06-04 18:55:02,800 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:45:34] 2025-06-04 18:55:02,800 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:45:34] 2025-06-04 18:55:02,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:45:34] 2025-06-04 18:55:02,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:45:34] 2025-06-04 18:55:02,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:45:34] 2025-06-04 18:55:02,801 | INFO     | aborting loop
[2025-06-04 21:45:34] 2025-06-04 18:55:03,800 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:03,807 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:03,854 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:03,873 | INFO     | all data control threads have been joined
[2025-06-04 21:45:34] 2025-06-04 18:55:03,939 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,117 | INFO     | all payload control threads have been joined
[2025-06-04 21:45:34] 2025-06-04 18:55:04,259 | INFO     | [job] validate thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,277 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,383 | INFO     | all job control threads have been joined
[2025-06-04 21:45:34] 2025-06-04 18:55:04,414 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:45:34] 2025-06-04 18:55:04,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,716 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,802 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,859 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:04,879 | INFO     | [data] control thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:05,123 | INFO     | [payload] control thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:05,389 | INFO     | [job] control thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:05,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:45:34] 2025-06-04 18:55:05,503 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:09,450 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:45:34] 2025-06-04 18:55:10,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233648658240)>', '<ExcThread(monitor, started 140233190385408)>']
[2025-06-04 21:45:34] 2025-06-04 18:55:10,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:45:34] 2025-06-04 18:55:10,849 | INFO     | [monitor] control thread has ended
[2025-06-04 21:45:34] 2025-06-04 18:55:15,839 | INFO     | all workflow threads have been joined
[2025-06-04 21:45:34] 2025-06-04 18:55:15,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:45:34] 2025-06-04 18:55:15,840 | INFO     | traces error code: 0
[2025-06-04 21:45:34] 2025-06-04 18:55:15,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:45:34] 2025-06-04 18:55:16,151 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:45:34] 2025-06-04 18:55:16,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:45:34] 2025-06-04 18:55:16,168 [wrapper] pilotpid: 24092
[2025-06-04 21:45:34] 2025-06-04 18:55:16,255 [wrapper] Pilot exit status: 0
[2025-06-04 21:45:34] 2025-06-04 18:55:16,760 [wrapper] pandaids: 6678313268
[2025-06-04 21:45:34] 2025-06-04 18:55:17,265 [wrapper] cleanup supervisor_pilot 11467 24093
[2025-06-04 21:45:34] 2025-06-04 18:55:17,289 [wrapper] Test setup, not cleaning
[2025-06-04 21:45:34] 2025-06-04 18:55:17,313 [wrapper] apfmon messages muted
[2025-06-04 21:45:34] 2025-06-04 18:55:17,372 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:45:34] 2025-06-04 18:55:17,395 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:45:34]  *** Error codes and diagnostics ***
[2025-06-04 21:45:34]     "exeErrorCode": 0,
[2025-06-04 21:45:34]     "exeErrorDiag": "",
[2025-06-04 21:45:34]     "pilotErrorCode": 0,
[2025-06-04 21:45:34]     "pilotErrorDiag": "",
[2025-06-04 21:45:34]  *** Listing of results directory ***
[2025-06-04 21:45:34] total 406584
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-04 21:45:34] -rwx------. 1 boinc boinc     37140 Jun  4 06:21 runpilot2-wrapper.sh
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:21 queuedata.json
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc       100 Jun  4 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:45:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 16:54 run_atlas
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc       105 Jun  4 16:54 job.xml
[2025-06-04 21:45:34] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:54 start_atlas.sh
[2025-06-04 21:45:34] drwxrwx--x. 2 boinc boinc        68 Jun  4 16:54 shared
[2025-06-04 21:45:34] -rw-r--r--. 2 boinc boinc    508877 Jun  4 16:54 input.tar.gz
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc      6392 Jun  4 16:54 init_data.xml
[2025-06-04 21:45:34] -rw-r--r--. 2 boinc boinc 219518676 Jun  4 16:54 EVNT.45006593._002097.pool.root.1
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc         0 Jun  4 16:54 boinc_lockfile
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc      2525 Jun  4 16:55 pandaJob.out
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc    987207 Jun  4 16:55 agis_schedconf.cvmfs.json
[2025-06-04 21:45:34] drwx------. 4 boinc boinc      4096 Jun  4 16:55 pilot3
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc 189744540 Jun  4 20:52 HITS.45006595._052362.pool.root.1
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc       530 Jun  4 20:52 boinc_task_state.xml
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc      1017 Jun  4 20:53 memory_monitor_summary.json
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc   1598969 Jun  4 20:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc    385247 Jun  4 20:53 log.45006595._052362.job.log.tgz.1
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc        95 Jun  4 20:54 pilot_heartbeat.json
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc      7690 Jun  4 20:54 heartbeat.json
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc      4932 Jun  4 20:55 pilotlog.txt
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc   1239460 Jun  4 20:55 log.45006595._052362.job.log.1
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc       357 Jun  4 20:55 output.list
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:55 runtime_log
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc   1648640 Jun  4 20:55 result.tar.gz
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc      8673 Jun  4 20:55 runtime_log.err
[2025-06-04 21:45:34] -rw-------. 1 boinc boinc       657 Jun  4 20:55 OWSNDm5nug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBDnKDmnugO0n.diag
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:45 boinc_mmap_file
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:45 wrapper_checkpoint.txt
[2025-06-04 21:45:34] -rw-r--r--. 1 boinc boinc     20585 Jun  4 21:45 stderr.txt
[2025-06-04 21:45:35] HITS file was successfully produced:
[2025-06-04 21:45:35] -rw-------. 1 boinc boinc 189744540 Jun  4 20:52 shared/HITS.pool.root.1
[2025-06-04 21:45:35]  *** Contents of shared directory: ***
[2025-06-04 21:45:35] total 401804
[2025-06-04 21:45:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:54 start_atlas.sh
[2025-06-04 21:45:35] -rw-r--r--. 2 boinc boinc    508877 Jun  4 16:54 input.tar.gz
[2025-06-04 21:45:35] -rw-r--r--. 2 boinc boinc 219518676 Jun  4 16:54 ATLAS.root_0
[2025-06-04 21:45:35] -rw-------. 1 boinc boinc 189744540 Jun  4 20:52 HITS.pool.root.1
[2025-06-04 21:45:35] -rw-------. 1 boinc boinc   1648640 Jun  4 20:55 result.tar.gz
21:45:36 (20417): run_atlas exited; CPU time 53771.041556
21:45:36 (20417): called boinc_finish(0)

</stderr_txt>
]]>

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