Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:38 (528556): wrapper (7.7.26015): starting
23:37:38 (528556): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 23:37:38] Arguments: --nthreads 12
[2025-06-03 23:37:38] Threads: 12
[2025-06-03 23:37:38] Checking for CVMFS
[2025-06-03 23:37:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:37:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:37:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:37:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:37:39] 2.11.5.0 138489 32814 227120 146771 3 270 42603804 45568000 17201 130560 0 269034782 99.788 180858422 25989 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 23:37:39] CVMFS is ok
[2025-06-03 23:37:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:37:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:37:39] Further information can be found at the LHC@home message board.
[2025-06-03 23:37:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:37:39] Checking for apptainer binary...
[2025-06-03 23:37:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:37:39] Running /usr/bin/apptainer --version
[2025-06-03 23:37:39] apptainer version 1.4.0-1.el9
[2025-06-03 23:37:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:37:39] wns0119.triumf.lcg
[2025-06-03 23:37:39] apptainer works
[2025-06-03 23:37:39] Set ATHENA_PROC_NUMBER=12
[2025-06-03 23:37:39] Set ATHENA_CORE_NUMBER=12
[2025-06-03 23:37:39] Starting ATLAS job with PandaID=6678313231
[2025-06-03 23:37:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:41:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | WARNING  | wrong length of table data, x=[1749019100.0], y=[24710.0] (must be same and length>=4)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | could have reported an average CPU frequency of 1956 MHz (4 samples)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | ..............................
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . Timing measurements:
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . get job = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . initial setup = 3 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . payload setup = 7 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . stage-in = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . payload execution = 18 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | . stage-out = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | . log creation = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | ..............................
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678313231/pilotlog.txt
[2025-06-03 23:41:11] 2025-06-04 06:40:39,810 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 23:41:11] - Log from pilotlog.txt -
[2025-06-03 23:41:11] 2025-06-04 06:40:39,790 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:41:11] 2025-06-04 06:40:39,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | WARNING  | found no stored workdir sizes
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | WARNING  | wrong length of table data, x=[1749019100.0], y=[24710.0] (must be same and length>=4)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | could have reported an average CPU frequency of 1956 MHz (4 samples)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | ..............................
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . Timing measurements:
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . get job = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . initial setup = 3 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . payload setup = 7 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . stage-in = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . payload execution = 18 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | . stage-out = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | . log creation = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | ..............................
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678313231/pilotlog.txt
[2025-06-03 23:41:11] 2025-06-04 06:40:39,810 | WARNING  | 
[2025-06-03 23:41:11] [begin log extracts]
[2025-06-03 23:41:11] - Log from pilotlog.txt -
[2025-06-03 23:41:11] 2025-06-04 06:40:39,790 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:41:11] 2025-06-04 06:40:39,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | WARNING  | found no stored workdir sizes
[2025-06-03 23:41:11] 2025-06-04 06:40:39,791 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | WARNING  | wrong length of table data, x=[1749019100.0], y=[24710.0] (must be same and length>=4)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | could have reported an average CPU frequency of 1956 MHz (4 samples)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | ..............................
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . Timing measurements:
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . get job = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . initial setup = 3 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . payload setup = 7 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . stage-in = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,792 | INFO     | . payload execution = 18 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | . stage-out = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | . log creation = 0 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | ..............................
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:41:11] 2025-06-04 06:40:39,793 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678313231/pilotlog.txt
[2025-06-03 23:41:11] [end log extracts]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,811 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,811 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | 
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | job summary report
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | --------------------------------------------------
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | PanDA job id: 6678313231
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | task id: 45006595
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 23:38:30,167 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | pilot state: failed 
[2025-06-03 23:41:11] 2025-06-04 06:40:39,895 | INFO     | transexitcode: 65
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | exeerrorcode: 65
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | exitcode: 65
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | cpuconsumptiontime: 23 s
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | nevents: 0
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | neventsw: 0
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | pid: 540976
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | pgrp: 540976
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | corecount: 12
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | event service: False
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | sizes: {0: 2405351, 1: 2405550, 6: 2405812, 11: 2405840, 29: 2429064, 31: 2433455, 152: 2433593}
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | --------------------------------------------------
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | 
[2025-06-03 23:41:11] 2025-06-04 06:40:39,896 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:41:11] 2025-06-04 06:40:39,917 | INFO     | job 6678313231 has completed (purged errors)
[2025-06-03 23:41:11] 2025-06-04 06:40:39,918 | INFO     | overall cleanup function is called
[2025-06-03 23:41:11] 2025-06-04 06:40:40,919 | INFO     | --- collectZombieJob: --- 10, [540976]
[2025-06-03 23:41:11] 2025-06-04 06:40:40,920 | INFO     | zombie collector waiting for pid 540976
[2025-06-03 23:41:11] 2025-06-04 06:40:40,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:41:11] 2025-06-04 06:40:40,920 | INFO     | collected zombie processes
[2025-06-03 23:41:11] 2025-06-04 06:40:40,920 | INFO     | will attempt to kill all subprocesses of pid=540976
[2025-06-03 23:41:11] 2025-06-04 06:40:41,162 | INFO     | process IDs to be killed: [540976] (in reverse order)
[2025-06-03 23:41:11] 2025-06-04 06:40:41,254 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:41:11] 2025-06-04 06:40:41,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:41:11] 2025-06-04 06:40:41,264 | INFO     | did not find any defunct processes belonging to 540976
[2025-06-03 23:41:11] 2025-06-04 06:40:41,274 | INFO     | did not find any defunct processes belonging to 540976
[2025-06-03 23:41:11] 2025-06-04 06:40:41,274 | INFO     | ready for new job
[2025-06-03 23:41:11] 2025-06-04 06:40:41,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:41:11] 2025-06-04 06:40:41,276 | INFO     | ***************************************
[2025-06-03 23:41:11] 2025-06-04 06:40:41,276 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 23:41:11] 2025-06-04 06:40:41,276 | INFO     | ***************************************
[2025-06-03 23:41:11] 2025-06-04 06:40:41,277 | INFO     | 
[2025-06-03 23:41:11] 2025-06-04 06:40:41,279 | INFO     | architecture information:
[2025-06-03 23:41:11] 2025-06-04 06:40:41,280 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:41:11] 2025-06-04 06:40:41,293 | INFO     | cat /etc/os-release:
[2025-06-03 23:41:11] NAME="CentOS Linux"
[2025-06-03 23:41:11] VERSION="7 (Core)"
[2025-06-03 23:41:11] ID="centos"
[2025-06-03 23:41:11] ID_LIKE="rhel fedora"
[2025-06-03 23:41:11] VERSION_ID="7"
[2025-06-03 23:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:41:11] ANSI_COLOR="0;31"
[2025-06-03 23:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:41:11] HOME_URL="https://www.centos.org/"
[2025-06-03 23:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:41:11] 
[2025-06-03 23:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:41:11] 
[2025-06-03 23:41:11] 2025-06-04 06:40:41,293 | INFO     | ***************************************
[2025-06-03 23:41:11] 2025-06-04 06:40:41,796 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 23:41:11] 2025-06-04 06:40:41,816 | INFO     | sufficient remaining disk space (1953882963968 B)
[2025-06-03 23:41:11] 2025-06-04 06:40:41,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:41:11] 2025-06-04 06:40:41,817 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:41:11] 2025-06-04 06:40:41,817 | INFO     | update_server=False
[2025-06-03 23:41:11] 2025-06-04 06:40:41,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:41:11] 2025-06-04 06:40:41,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:41:11] 2025-06-04 06:40:41,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:41:11] 2025-06-04 06:40:41,821 | INFO     | all data control threads have been joined
[2025-06-03 23:41:11] 2025-06-04 06:40:41,937 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 23:41:11] 2025-06-04 06:40:41,937 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 23:41:11] 2025-06-04 06:40:41,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:41:11] 2025-06-04 06:40:41,938 | INFO     | will abort loop
[2025-06-03 23:41:11] 2025-06-04 06:40:41,975 | INFO     | all payload control threads have been joined
[2025-06-03 23:41:11] 2025-06-04 06:40:42,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:41:11] 2025-06-04 06:40:42,424 | INFO     | all job control threads have been joined
[2025-06-03 23:41:11] 2025-06-04 06:40:42,819 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:42,819 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:42,820 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:42,826 | INFO     | [data] control thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:42,943 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:42,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:42,980 | INFO     | [payload] control thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:43,045 | INFO     | [job] validate thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:43,233 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:43,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:43,400 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:43,430 | INFO     | [job] control thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:43,824 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:44,058 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:44,311 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:46,154 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:41:11] 2025-06-04 06:40:48,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819197822784)>', '<ExcThread(monitor, started 139818432460544)>']
[2025-06-03 23:41:11] 2025-06-04 06:40:53,263 | INFO     | all workflow threads have been joined
[2025-06-03 23:41:11] 2025-06-04 06:40:53,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:41:11] 2025-06-04 06:40:53,264 | INFO     | traces error code: 0
[2025-06-03 23:41:11] 2025-06-04 06:40:53,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:41:11] 2025-06-04 06:41:11,634 | INFO     | PID=533684 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 23:41:11] 2025-06-04 06:41:11,634 | INFO     | .. there are 28 such processes running
[2025-06-03 23:41:11] 2025-06-04 06:41:11,635 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:41:11] 2025-06-04 06:41:11,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:41:11] 2025-06-04 06:41:11,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:41:11] 2025-06-04 06:41:11,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:41:11] 2025-06-04 06:41:11,636 | CRITICAL | thread 'MainThread' is not alive
[2025-06-03 23:41:11] 2025-06-04 06:41:11,636 | INFO     | [monitor] control thread has ended
[2025-06-03 23:41:11] 2025-06-04 06:41:11,791 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:41:11] 2025-06-04 06:41:11,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:41:11] 2025-06-04 06:41:11,799 [wrapper] pilotpid: 533684
[2025-06-03 23:41:11] 2025-06-04 06:41:11,803 [wrapper] Pilot exit status: 0
[2025-06-03 23:41:11] 2025-06-04 06:41:11,817 [wrapper] pandaids: 6678313231
[2025-06-03 23:41:11] 2025-06-04 06:41:11,881 [wrapper] cleanup supervisor_pilot  533693 533685
[2025-06-03 23:41:11] 2025-06-04 06:41:11,884 [wrapper] Test setup, not cleaning
[2025-06-03 23:41:11] 2025-06-04 06:41:11,888 [wrapper] apfmon messages muted
[2025-06-03 23:41:11] 2025-06-04 06:41:11,892 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:41:11] 2025-06-04 06:41:11,894 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:41:11]  *** Error codes and diagnostics ***
[2025-06-03 23:41:11]     "exeErrorCode": 65,
[2025-06-03 23:41:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 23:41:11]     "pilotErrorCode": 1305,
[2025-06-03 23:41:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 23:41:11]  *** Listing of results directory ***
[2025-06-03 23:41:11] total 213304
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-03 23:41:11] -rwx------. 1 boinc boinc     37140 Jun  3 21:19 runpilot2-wrapper.sh
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:19 queuedata.json
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:41:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:37 run_atlas
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:37 job.xml
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc      6597 Jun  3 23:37 init_data.xml
[2025-06-03 23:41:11] -rw-r--r--. 2 boinc boinc 214287665 Jun  3 23:37 EVNT.45006593._002095.pool.root.1
[2025-06-03 23:41:11] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:37 start_atlas.sh
[2025-06-03 23:41:11] drwxrwx--x. 2 boinc boinc      4096 Jun  3 23:37 shared
[2025-06-03 23:41:11] -rw-r--r--. 2 boinc boinc    564110 Jun  3 23:37 input.tar.gz
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:37 boinc_lockfile
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc      2525 Jun  3 23:37 pandaJob.out
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc    986745 Jun  3 23:37 agis_schedconf.cvmfs.json
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc   1603667 Jun  3 23:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:41:11] drwx------. 6 boinc boinc      4096 Jun  3 23:37 pilot3
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc       522 Jun  3 23:38 boinc_task_state.xml
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc       967 Jun  3 23:38 memory_monitor_summary.json
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc     20462 Jun  3 23:38 log.45006595._052325.job.log.tgz.1
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc      8369 Jun  3 23:40 heartbeat.json
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:41 boinc_mmap_file
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc        22 Jun  3 23:41 wrapper_checkpoint.txt
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc        95 Jun  3 23:41 pilot_heartbeat.json
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc       892 Jun  3 23:41 pilotlog.txt
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc     79487 Jun  3 23:41 log.45006595._052325.job.log.1
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc       188 Jun  3 23:41 output.list
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc       620 Jun  3 23:41 runtime_log
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc    122880 Jun  3 23:41 result.tar.gz
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc      8484 Jun  3 23:41 runtime_log.err
[2025-06-03 23:41:11] -rw-------. 1 boinc boinc       644 Jun  3 23:41 Km2LDm8lug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNCnKDmHGtTOn.diag
[2025-06-03 23:41:11] -rw-r--r--. 1 boinc boinc     21664 Jun  3 23:41 stderr.txt
[2025-06-03 23:41:11] No HITS result produced
[2025-06-03 23:41:11]  *** Contents of shared directory: ***
[2025-06-03 23:41:12] total 209956
[2025-06-03 23:41:12] -rw-r--r--. 2 boinc boinc 214287665 Jun  3 23:37 ATLAS.root_0
[2025-06-03 23:41:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:37 start_atlas.sh
[2025-06-03 23:41:12] -rw-r--r--. 2 boinc boinc    564110 Jun  3 23:37 input.tar.gz
[2025-06-03 23:41:12] -rw-------. 1 boinc boinc    122880 Jun  3 23:41 result.tar.gz
23:41:13 (528556): run_atlas exited; CPU time 27.203833
23:41:13 (528556): called boinc_finish(0)

</stderr_txt>
]]>

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