Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:21:26 (2972): wrapper (7.7.26015): starting
02:21:26 (2972): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 02:21:26] Arguments: --nthreads 12
[2025-06-04 02:21:26] Threads: 12
[2025-06-04 02:21:26] Checking for CVMFS
[2025-06-04 02:21:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:21:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:21:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:21:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:21:26] 2.11.2.0 2945 35315 88976 146771 3 55 18750259 20275201 1 130560 0 15994451 99.983 6481877 7933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 02:21:26] CVMFS is ok
[2025-06-04 02:21:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:21:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:21:26] Further information can be found at the LHC@home message board.
[2025-06-04 02:21:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:21:26] Checking for apptainer binary...
[2025-06-04 02:21:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:21:26] Running /usr/bin/apptainer --version
[2025-06-04 02:21:26] apptainer version 1.3.2-1.el7
[2025-06-04 02:21:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:21:28] c-205-2.aglt2.org
[2025-06-04 02:21:28] apptainer works
[2025-06-04 02:21:28] Set ATHENA_PROC_NUMBER=12
[2025-06-04 02:21:28] Set ATHENA_CORE_NUMBER=12
[2025-06-04 02:21:28] Starting ATLAS job with PandaID=6678312760
[2025-06-04 02:21:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:27:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:27:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:27:04]  replicas=None
[2025-06-04 03:27:04]  scope=mc23_13p6TeV
[2025-06-04 03:27:04]  status=None
[2025-06-04 03:27:04]  status_code=0
[2025-06-04 03:27:04]  storage_token=
[2025-06-04 03:27:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678312760/log.45006595._052206.job.log.tgz.1
[2025-06-04 03:27:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/06/log.45006595._052206.job.log.tgz.1
[2025-06-04 03:27:04]  workdir=None
[2025-06-04 03:27:04] ]
[2025-06-04 03:27:04] 2025-06-04 07:26:33,460 | INFO     | transferring file log.45006595._052206.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678312760/log.45006595._052206.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 03:27:04] 2025-06-04 07:26:33,460 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678312760/log.45006595._052206.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052206.job
[2025-06-04 03:27:04] 2025-06-04 07:26:33,493 | INFO     | adding to output.list: log.45006595._052206.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/06/log.45006595._052206.job.log.tg
[2025-06-04 03:27:04] 2025-06-04 07:26:33,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:27:04] 2025-06-04 07:26:33,494 | INFO     | summary of transferred files:
[2025-06-04 03:27:04] 2025-06-04 07:26:33,494 | INFO     |  -- lfn=log.45006595._052206.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:27:04] 2025-06-04 07:26:33,494 | INFO     | stage-out finished correctly
[2025-06-04 03:27:04] 2025-06-04 07:26:33,889 | INFO     | 3895s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 03:27:04] 2025-06-04 07:26:34,273 | WARNING  | process 13058 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 03:27:04] 2025-06-04 07:26:34,273 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678312760/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:27:04] 2025-06-04 07:26:34,362 | INFO     | number of running child processes to parent process 13058: 1
[2025-06-04 03:27:04] 2025-06-04 07:26:34,362 | INFO     | maximum number of monitored processes: 6
[2025-06-04 03:27:04] 2025-06-04 07:26:35,606 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:27:04] 2025-06-04 07:26:36,866 | INFO     | monitor loop #291: job 0:6678312760 is in state 'finished'
[2025-06-04 03:27:04] 2025-06-04 07:26:36,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:27:04] 2025-06-04 07:26:38,516 | INFO     | job 6678312760 has state=finished
[2025-06-04 03:27:04] 2025-06-04 07:26:38,555 | INFO     | preparing for final server update for job 6678312760 in state='finished'
[2025-06-04 03:27:04] 2025-06-04 07:26:38,556 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:27:04] 2025-06-04 07:26:38,556 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:27:04] 2025-06-04 07:26:38,556 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:27:04] 2025-06-04 07:26:38,556 | INFO     | job 6678312760 has finished - writing final server update
[2025-06-04 03:27:04] 2025-06-04 07:26:38,557 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:27:04] 2025-06-04 07:26:38,559 | INFO     | executing command: lscpu
[2025-06-04 03:27:04] 2025-06-04 07:26:38,585 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:27:04] 2025-06-04 07:26:39,369 | INFO     | monitor loop #292: job 0:6678312760 is in state 'finished'
[2025-06-04 03:27:04] 2025-06-04 07:26:39,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:27:04] 2025-06-04 07:26:41,026 | INFO     | PID=6585 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 03:27:04] 2025-06-04 07:26:41,872 | INFO     | monitor loop #293: job 0:6678312760 is in state 'finished'
[2025-06-04 03:27:04] 2025-06-04 07:26:41,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:27:04] 2025-06-04 07:26:43,251 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 03:27:04] 2025-06-04 07:26:43,252 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678312760/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:27:04] 2025-06-04 07:26:43,253 | INFO     | extracted standard info from prmon json
[2025-06-04 03:27:04] 2025-06-04 07:26:43,253 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:27:04] 2025-06-04 07:26:43,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:27:04] 2025-06-04 07:26:43,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:27:04] 2025-06-04 07:26:43,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:27:04] 2025-06-04 07:26:43,256 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:27:04] 2025-06-04 07:26:43,256 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,256 | INFO     | sum of deviations: -1666263800.0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,257 | INFO     | mean x: 1749020145.0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,257 | INFO     | mean y: 2903119.0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,257 | INFO     | -- intersect: 50768473570.840805
[2025-06-04 03:27:04] 2025-06-04 07:26:43,257 | INFO     | intersect: 50768473570.840805
[2025-06-04 03:27:04] 2025-06-04 07:26:43,257 | INFO     | chi2: 0.0908526919272288
[2025-06-04 03:27:04] 2025-06-04 07:26:43,258 | INFO     | -- intersect: 50768473570.840805
[2025-06-04 03:27:04] 2025-06-04 07:26:43,258 | INFO     | current memory leak: -29.03 B/s (using 57 data points, chi2=0.09)
[2025-06-04 03:27:04] 2025-06-04 07:26:43,258 | INFO     | ..............................
[2025-06-04 03:27:04] 2025-06-04 07:26:43,258 | INFO     | . Timing measurements:
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . get job = 0 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . initial setup = 2 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . payload setup = 9 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . stage-in = 0 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . payload execution = 3862 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . stage-out = 0 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,259 | INFO     | . log creation = 0 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,260 | INFO     | ..............................
[2025-06-04 03:27:04] 2025-06-04 07:26:43,343 | INFO     | 
[2025-06-04 03:27:04] 2025-06-04 07:26:43,343 | INFO     | job summary report
[2025-06-04 03:27:04] 2025-06-04 07:26:43,344 | INFO     | --------------------------------------------------
[2025-06-04 03:27:04] 2025-06-04 07:26:43,344 | INFO     | PanDA job id: 6678312760
[2025-06-04 03:27:04] 2025-06-04 07:26:43,344 | INFO     | task id: 45006595
[2025-06-04 03:27:04] 2025-06-04 07:26:43,344 | INFO     | errors: (none)
[2025-06-04 03:27:04] 2025-06-04 07:26:43,344 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:27:04] 2025-06-04 07:26:43,344 | INFO     | pilot state: finished 
[2025-06-04 03:27:04] 2025-06-04 07:26:43,345 | INFO     | transexitcode: 0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,345 | INFO     | exeerrorcode: 0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,345 | INFO     | exeerrordiag: 
[2025-06-04 03:27:04] 2025-06-04 07:26:43,345 | INFO     | exitcode: 0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,345 | INFO     | exitmsg: OK
[2025-06-04 03:27:04] 2025-06-04 07:26:43,345 | INFO     | cpuconsumptiontime: 40820 s
[2025-06-04 03:27:04] 2025-06-04 07:26:43,346 | INFO     | nevents: 400
[2025-06-04 03:27:04] 2025-06-04 07:26:43,346 | INFO     | neventsw: 0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,346 | INFO     | pid: 13058
[2025-06-04 03:27:04] 2025-06-04 07:26:43,346 | INFO     | pgrp: 13058
[2025-06-04 03:27:04] 2025-06-04 07:26:43,346 | INFO     | corecount: 12
[2025-06-04 03:27:04] 2025-06-04 07:26:43,346 | INFO     | event service: False
[2025-06-04 03:27:04] 2025-06-04 07:26:43,347 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3875: 2431097, 3876: 2440038, 3878: 2440094, 3885: 2440392}
[2025-06-04 03:27:04] 2025-06-04 07:26:43,347 | INFO     | --------------------------------------------------
[2025-06-04 03:27:04] 2025-06-04 07:26:43,347 | INFO     | 
[2025-06-04 03:27:04] 2025-06-04 07:26:43,347 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 03:27:04] 2025-06-04 07:26:43,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:27:04] 2025-06-04 07:26:43,374 | INFO     | job 6678312760 has completed (purged errors)
[2025-06-04 03:27:04] 2025-06-04 07:26:43,374 | INFO     | overall cleanup function is called
[2025-06-04 03:27:04] 2025-06-04 07:26:44,382 | INFO     | --- collectZombieJob: --- 10, [13058]
[2025-06-04 03:27:04] 2025-06-04 07:26:44,382 | INFO     | zombie collector waiting for pid 13058
[2025-06-04 03:27:04] 2025-06-04 07:26:44,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:27:04] 2025-06-04 07:26:44,391 | INFO     | collected zombie processes
[2025-06-04 03:27:04] 2025-06-04 07:26:44,391 | INFO     | will attempt to kill all subprocesses of pid=13058
[2025-06-04 03:27:04] 2025-06-04 07:26:44,483 | INFO     | process IDs to be killed: [13058] (in reverse order)
[2025-06-04 03:27:04] 2025-06-04 07:26:44,535 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:27:04] 2025-06-04 07:26:44,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:27:04] 2025-06-04 07:26:44,539 | INFO     | did not find any defunct processes belonging to 13058
[2025-06-04 03:27:04] 2025-06-04 07:26:44,541 | INFO     | did not find any defunct processes belonging to 13058
[2025-06-04 03:27:04] 2025-06-04 07:26:44,541 | INFO     | ready for new job
[2025-06-04 03:27:04] 2025-06-04 07:26:44,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:27:04] 2025-06-04 07:26:44,543 | INFO     | **************************************
[2025-06-04 03:27:04] 2025-06-04 07:26:44,543 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:27:04] 2025-06-04 07:26:44,543 | INFO     | **************************************
[2025-06-04 03:27:04] 2025-06-04 07:26:44,543 | INFO     | 
[2025-06-04 03:27:04] 2025-06-04 07:26:44,544 | INFO     | architecture information:
[2025-06-04 03:27:04] 2025-06-04 07:26:44,544 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:27:04] 2025-06-04 07:26:44,557 | INFO     | cat /etc/os-release:
[2025-06-04 03:27:04] NAME="CentOS Linux"
[2025-06-04 03:27:04] VERSION="7 (Core)"
[2025-06-04 03:27:04] ID="centos"
[2025-06-04 03:27:04] ID_LIKE="rhel fedora"
[2025-06-04 03:27:04] VERSION_ID="7"
[2025-06-04 03:27:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:27:04] ANSI_COLOR="0;31"
[2025-06-04 03:27:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:27:04] HOME_URL="https://www.centos.org/"
[2025-06-04 03:27:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:27:04] 
[2025-06-04 03:27:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:27:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:27:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:27:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:27:04] 
[2025-06-04 03:27:04] 2025-06-04 07:26:44,558 | INFO     | **************************************
[2025-06-04 03:27:04] 2025-06-04 07:26:45,061 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 03:27:04] 2025-06-04 07:26:45,077 | INFO     | sufficient remaining disk space (29489102848 B)
[2025-06-04 03:27:04] 2025-06-04 07:26:45,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:27:04] 2025-06-04 07:26:45,077 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:27:04] 2025-06-04 07:26:45,078 | INFO     | update_server=False
[2025-06-04 03:27:04] 2025-06-04 07:26:45,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:27:04] 2025-06-04 07:26:45,078 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:27:04] 2025-06-04 07:26:45,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:27:04] 2025-06-04 07:26:45,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:27:04] 2025-06-04 07:26:45,079 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:27:04] 2025-06-04 07:26:45,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:27:04] 2025-06-04 07:26:45,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:27:04] 2025-06-04 07:26:45,099 | INFO     | all job control threads have been joined
[2025-06-04 03:27:04] 2025-06-04 07:26:45,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:27:04] 2025-06-04 07:26:45,379 | INFO     | aborting loop
[2025-06-04 03:27:04] 2025-06-04 07:26:46,083 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,085 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,103 | INFO     | [job] control thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,168 | INFO     | all data control threads have been joined
[2025-06-04 03:27:04] 2025-06-04 07:26:46,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:27:04] 2025-06-04 07:26:46,384 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,557 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,557 | INFO     | all payload control threads have been joined
[2025-06-04 03:27:04] 2025-06-04 07:26:46,839 | INFO     | [job] validate thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,937 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,940 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:46,965 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:47,085 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:47,174 | INFO     | [data] control thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:47,522 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:47,563 | INFO     | [payload] control thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:47,593 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:50,207 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:55,892 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:27:04] 2025-06-04 07:26:56,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:27:04] 2025-06-04 07:26:58,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435455137600)>', '<ExcThread(monitor, started 140434860914432)>']
[2025-06-04 03:27:04] 2025-06-04 07:26:59,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:27:04] 2025-06-04 07:26:59,130 | INFO     | [monitor] control thread has ended
[2025-06-04 03:27:04] 2025-06-04 07:27:03,965 | INFO     | all workflow threads have been joined
[2025-06-04 03:27:04] 2025-06-04 07:27:03,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:27:04] 2025-06-04 07:27:03,970 | INFO     | traces error code: 0
[2025-06-04 03:27:04] 2025-06-04 07:27:03,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:27:04] 2025-06-04 07:27:04,060 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:27:04] 2025-06-04 07:27:04,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:27:04] 2025-06-04 07:27:04,068 [wrapper] pilotpid: 6585
[2025-06-04 03:27:04] 2025-06-04 07:27:04,071 [wrapper] Pilot exit status: 0
[2025-06-04 03:27:04] 2025-06-04 07:27:04,088 [wrapper] pandaids: 6678312760
[2025-06-04 03:27:04] 2025-06-04 07:27:04,126 [wrapper] cleanup supervisor_pilot 18429 6586
[2025-06-04 03:27:04] 2025-06-04 07:27:04,130 [wrapper] Test setup, not cleaning
[2025-06-04 03:27:04] 2025-06-04 07:27:04,134 [wrapper] apfmon messages muted
[2025-06-04 03:27:04] 2025-06-04 07:27:04,137 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:27:04] 2025-06-04 07:27:04,141 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:27:04]  *** Error codes and diagnostics ***
[2025-06-04 03:27:04]     "exeErrorCode": 0,
[2025-06-04 03:27:04]     "exeErrorDiag": "",
[2025-06-04 03:27:04]     "pilotErrorCode": 0,
[2025-06-04 03:27:04]     "pilotErrorDiag": "",
[2025-06-04 03:27:04]  *** Listing of results directory ***
[2025-06-04 03:27:04] total 389204
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 03:27:04] -rwx------ 1 boincer umatlas     37140 Jun  4 00:15 runpilot2-wrapper.sh
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:15 queuedata.json
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas       100 Jun  4 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:27:04] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 02:21 run_atlas
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas       105 Jun  4 02:21 job.xml
[2025-06-04 03:27:04] -rw-r--r-- 2 boincer umatlas 214191031 Jun  4 02:21 EVNT.45006593._002091.pool.root.1
[2025-06-04 03:27:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:21 start_atlas.sh
[2025-06-04 03:27:04] drwxrwx--x 2 boincer umatlas      4096 Jun  4 02:21 shared
[2025-06-04 03:27:04] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 02:21 input.tar.gz
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas         0 Jun  4 02:21 boinc_lockfile
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 02:21 pandaJob.out
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas    986745 Jun  4 02:21 agis_schedconf.cvmfs.json
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas   1603667 Jun  4 02:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:27:04] drwx------ 4 boincer umatlas      4096 Jun  4 02:21 pilot3
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas      5866 Jun  4 03:20 init_data.xml
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas 179067979 Jun  4 03:26 HITS.45006595._052206.pool.root.1
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas      1050 Jun  4 03:26 memory_monitor_summary.json
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas       530 Jun  4 03:26 boinc_task_state.xml
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas        95 Jun  4 03:26 pilot_heartbeat.json
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas    345258 Jun  4 03:26 log.45006595._052206.job.log.tgz.1
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas      7745 Jun  4 03:26 heartbeat.json
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 03:26 boinc_mmap_file
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas        27 Jun  4 03:27 wrapper_checkpoint.txt
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas      4548 Jun  4 03:27 pilotlog.txt
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas    381569 Jun  4 03:27 log.45006595._052206.job.log.1
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas       357 Jun  4 03:27 output.list
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas       620 Jun  4 03:27 runtime_log
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas    747520 Jun  4 03:27 result.tar.gz
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 03:27 runtime_log.err
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas       658 Jun  4 03:27 htXNDmgiug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDAnKDmPGVXEn.diag
[2025-06-04 03:27:04] -rw-r--r-- 1 boincer umatlas     21898 Jun  4 03:27 stderr.txt
[2025-06-04 03:27:04] HITS file was successfully produced:
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas 179067979 Jun  4 03:26 shared/HITS.pool.root.1
[2025-06-04 03:27:04]  *** Contents of shared directory: ***
[2025-06-04 03:27:04] total 385292
[2025-06-04 03:27:04] -rw-r--r-- 2 boincer umatlas 214191031 Jun  4 02:21 ATLAS.root_0
[2025-06-04 03:27:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 02:21 start_atlas.sh
[2025-06-04 03:27:04] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 02:21 input.tar.gz
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas 179067979 Jun  4 03:26 HITS.pool.root.1
[2025-06-04 03:27:04] -rw------- 1 boincer umatlas    747520 Jun  4 03:27 result.tar.gz
03:27:06 (2972): run_atlas exited; CPU time 40796.801348
03:27:06 (2972): called boinc_finish(0)

</stderr_txt>
]]>

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