Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:01 (30954): wrapper (7.7.26015): starting
17:21:01 (30954): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:21:01] Arguments: --nthreads 8
[2025-06-04 17:21:01] Threads: 8
[2025-06-04 17:21:01] Checking for CVMFS
[2025-06-04 17:21:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:21:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:21:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:21:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:21:03] 2.11.2.0 13961 33403 89124 146783 0 59 12867923 25165825 3918 130560 0 17073900 99.769 19852526 2338 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 17:21:03] CVMFS is ok
[2025-06-04 17:21:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:21:03] Checking for apptainer binary...
[2025-06-04 17:21:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:21:03] Running /usr/bin/apptainer --version
[2025-06-04 17:21:03] apptainer version 1.3.2-1.el7
[2025-06-04 17:21:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:21:08] cg-vwn452.simple-grid.lan
[2025-06-04 17:21:08] apptainer works
[2025-06-04 17:21:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:21:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:21:09] Starting ATLAS job with PandaID=6678245679
[2025-06-04 17:21:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:27:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:27:02] 2025-06-04 19:23:58,749 | INFO     | extracted standard info from prmon json
[2025-06-04 21:27:02] 2025-06-04 19:23:58,749 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:27:02] 2025-06-04 19:23:58,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:27:02] 2025-06-04 19:23:58,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:27:02] 2025-06-04 19:23:58,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:27:02] 2025-06-04 19:23:58,754 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:27:02] 2025-06-04 19:23:58,755 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 21:27:02] 2025-06-04 19:23:58,757 | INFO     | sum of deviations: 61592927228.50003
[2025-06-04 21:27:02] 2025-06-04 19:23:58,757 | INFO     | mean x: 1749058054.5
[2025-06-04 21:27:02] 2025-06-04 19:23:58,757 | INFO     | mean y: 2439247.46460177
[2025-06-04 21:27:02] 2025-06-04 19:23:58,757 | INFO     | -- intersect: -30095712740.18671
[2025-06-04 21:27:02] 2025-06-04 19:23:58,758 | INFO     | intersect: -30095712740.18671
[2025-06-04 21:27:02] 2025-06-04 19:23:58,758 | INFO     | chi2: 6.528859286232341
[2025-06-04 21:27:02] 2025-06-04 19:23:58,758 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,760 | INFO     | sum of deviations: 74988578621.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | mean x: 1749057902.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | mean y: 2447864.5791855203
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | -- intersect: -39185539176.446686
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | intersect: -39185539176.446686
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | chi2: 5.822191076428039
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | current chi2=5.822191076428039 (change=10.823762296339886 %)
[2025-06-04 21:27:02] 2025-06-04 19:23:58,761 | INFO     | right removable region: 220
[2025-06-04 21:27:02] 2025-06-04 19:23:58,762 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,764 | INFO     | sum of deviations: -14862236907.999998
[2025-06-04 21:27:02] 2025-06-04 19:23:58,764 | INFO     | mean x: 1749058207.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,764 | INFO     | mean y: 2489375.5248868777
[2025-06-04 21:27:02] 2025-06-04 19:23:58,764 | INFO     | -- intersect: 7769288795.171687
[2025-06-04 21:27:02] 2025-06-04 19:23:58,764 | INFO     | intersect: 7769288795.171687
[2025-06-04 21:27:02] 2025-06-04 19:23:58,765 | INFO     | chi2: 1.9142618594620855
[2025-06-04 21:27:02] 2025-06-04 19:23:58,765 | INFO     | current chi2=1.9142618594620855 (change=70.67999514863547 %)
[2025-06-04 21:27:02] 2025-06-04 19:23:58,773 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,774 | INFO     | sum of deviations: -44198528653.5
[2025-06-04 21:27:02] 2025-06-04 19:23:58,774 | INFO     | mean x: 1749058359.5
[2025-06-04 21:27:02] 2025-06-04 19:23:58,775 | INFO     | mean y: 2509359.652777778
[2025-06-04 21:27:02] 2025-06-04 19:23:58,775 | INFO     | -- intersect: 24741486754.14808
[2025-06-04 21:27:02] 2025-06-04 19:23:58,775 | INFO     | intersect: 24741486754.14808
[2025-06-04 21:27:02] 2025-06-04 19:23:58,775 | INFO     | chi2: 0.9671911186405538
[2025-06-04 21:27:02] 2025-06-04 19:23:58,775 | INFO     | current chi2=0.9671911186405538 (change=49.4744611945443 %)
[2025-06-04 21:27:02] 2025-06-04 19:23:58,776 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,777 | INFO     | sum of deviations: -43460623884.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | mean x: 1749058512.0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | mean y: 2508790.63507109
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | -- intersect: 26099128675.920235
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | intersect: 26099128675.920235
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | chi2: 0.950512002011751
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | current chi2=0.950512002011751 (change=1.7244902591998936 %)
[2025-06-04 21:27:02] 2025-06-04 19:23:58,778 | INFO     | left removable region: 30
[2025-06-04 21:27:02] 2025-06-04 19:23:58,779 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 21:27:02] 2025-06-04 19:23:58,780 | INFO     | sum of deviations: -6947318487.000001
[2025-06-04 21:27:02] 2025-06-04 19:23:58,780 | INFO     | mean x: 1749058786.5
[2025-06-04 21:27:02] 2025-06-04 19:23:58,780 | INFO     | mean y: 2501588.1157894735
[2025-06-04 21:27:02] 2025-06-04 19:23:58,781 | INFO     | -- intersect: 5715898805.444245
[2025-06-04 21:27:02] 2025-06-04 19:23:58,781 | INFO     | intersect: 5715898805.444245
[2025-06-04 21:27:02] 2025-06-04 19:23:58,781 | INFO     | chi2: 0.07812702320360566
[2025-06-04 21:27:02] 2025-06-04 19:23:58,781 | INFO     | -- intersect: 5715898805.444245
[2025-06-04 21:27:02] 2025-06-04 19:23:58,781 | INFO     | current memory leak: -3.27 B/s (using 190 data points, chi2=0.08)
[2025-06-04 21:27:02] 2025-06-04 19:23:58,782 | INFO     | ..............................
[2025-06-04 21:27:02] 2025-06-04 19:23:58,782 | INFO     | . Timing measurements:
[2025-06-04 21:27:02] 2025-06-04 19:23:58,782 | INFO     | . get job = 0 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,782 | INFO     | . initial setup = 16 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,783 | INFO     | . payload setup = 176 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,783 | INFO     | . stage-in = 0 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,783 | INFO     | . payload execution = 13897 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,783 | INFO     | . stage-out = 6 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,783 | INFO     | . log creation = 1 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,783 | INFO     | ..............................
[2025-06-04 21:27:02] 2025-06-04 19:23:58,975 | INFO     | 
[2025-06-04 21:27:02] 2025-06-04 19:23:58,975 | INFO     | job summary report
[2025-06-04 21:27:02] 2025-06-04 19:23:58,975 | INFO     | --------------------------------------------------
[2025-06-04 21:27:02] 2025-06-04 19:23:58,975 | INFO     | PanDA job id: 6678245679
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | task id: 45006595
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | errors: (none)
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | pilot state: finished 
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | transexitcode: 0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | exeerrorcode: 0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | exeerrordiag: 
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | exitcode: 0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | exitmsg: OK
[2025-06-04 21:27:02] 2025-06-04 19:23:58,976 | INFO     | cpuconsumptiontime: 51513 s
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | nevents: 400
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | neventsw: 0
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | pid: 10903
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | pgrp: 10903
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | corecount: 8
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | event service: False
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | sizes: {0: 2397115, 1: 2397370, 12: 2397370, 23: 2397398, 34: 2397426, 45: 2397454, 55: 2397610, 66: 2397638, 77: 2397666, 88: 2397722, 96: 2397956, 98: 2398264, 1
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | --------------------------------------------------
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | 
[2025-06-04 21:27:02] 2025-06-04 19:23:58,977 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 21:27:02] 2025-06-04 19:23:59,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:27:02] 2025-06-04 19:23:59,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:27:02] 2025-06-04 19:23:59,466 | INFO     | job 6678245679 has completed (purged errors)
[2025-06-04 21:27:02] 2025-06-04 19:23:59,466 | INFO     | overall cleanup function is called
[2025-06-04 21:27:02] 2025-06-04 19:24:00,477 | INFO     | --- collectZombieJob: --- 10, [10903]
[2025-06-04 21:27:02] 2025-06-04 19:24:00,477 | INFO     | zombie collector waiting for pid 10903
[2025-06-04 21:27:02] 2025-06-04 19:24:00,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:27:02] 2025-06-04 19:24:00,478 | INFO     | collected zombie processes
[2025-06-04 21:27:02] 2025-06-04 19:24:00,478 | INFO     | will attempt to kill all subprocesses of pid=10903
[2025-06-04 21:27:02] 2025-06-04 19:24:00,598 | INFO     | process IDs to be killed: [10903] (in reverse order)
[2025-06-04 21:27:02] 2025-06-04 19:24:01,402 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:27:02] 2025-06-04 19:24:01,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:27:02] 2025-06-04 19:24:01,405 | INFO     | did not find any defunct processes belonging to 10903
[2025-06-04 21:27:02] 2025-06-04 19:24:01,409 | INFO     | did not find any defunct processes belonging to 10903
[2025-06-04 21:27:02] 2025-06-04 19:24:01,409 | INFO     | ready for new job
[2025-06-04 21:27:02] 2025-06-04 19:24:01,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:27:02] 2025-06-04 19:24:01,415 | INFO     | **************************************
[2025-06-04 21:27:02] 2025-06-04 19:24:01,415 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:27:02] 2025-06-04 19:24:01,415 | INFO     | **************************************
[2025-06-04 21:27:02] 2025-06-04 19:24:01,415 | INFO     | 
[2025-06-04 21:27:02] 2025-06-04 19:24:01,416 | INFO     | pilot is running in a VM
[2025-06-04 21:27:02] 2025-06-04 19:24:01,416 | INFO     | architecture information:
[2025-06-04 21:27:02] 2025-06-04 19:24:01,430 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:27:02] 2025-06-04 19:24:01,734 | INFO     | cat /etc/os-release:
[2025-06-04 21:27:02] NAME="CentOS Linux"
[2025-06-04 21:27:02] VERSION="7 (Core)"
[2025-06-04 21:27:02] ID="centos"
[2025-06-04 21:27:02] ID_LIKE="rhel fedora"
[2025-06-04 21:27:02] VERSION_ID="7"
[2025-06-04 21:27:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:27:02] ANSI_COLOR="0;31"
[2025-06-04 21:27:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:27:02] HOME_URL="https://www.centos.org/"
[2025-06-04 21:27:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:27:02] 
[2025-06-04 21:27:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:27:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:27:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:27:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:27:02] 
[2025-06-04 21:27:02] 2025-06-04 19:24:01,735 | INFO     | **************************************
[2025-06-04 21:27:02] 2025-06-04 19:24:02,238 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 21:27:02] 2025-06-04 19:24:02,524 | INFO     | sufficient remaining disk space (496581476352 B)
[2025-06-04 21:27:02] 2025-06-04 19:24:02,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:27:02] 2025-06-04 19:24:02,524 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:27:02] 2025-06-04 19:24:02,524 | INFO     | update_server=False
[2025-06-04 21:27:02] 2025-06-04 19:24:02,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:27:02] 2025-06-04 19:24:02,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:27:02] 2025-06-04 19:24:02,527 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:27:02] 2025-06-04 19:24:02,527 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:27:02] 2025-06-04 19:24:02,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:27:02] 2025-06-04 19:24:02,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:27:02] 2025-06-04 19:24:03,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:27:02] 2025-06-04 19:24:03,165 | INFO     | aborting loop
[2025-06-04 21:27:02] 2025-06-04 19:24:03,353 | INFO     | all job control threads have been joined
[2025-06-04 21:27:02] 2025-06-04 19:24:03,510 | INFO     | all payload control threads have been joined
[2025-06-04 21:27:02] 2025-06-04 19:24:03,517 | INFO     | all data control threads have been joined
[2025-06-04 21:27:02] 2025-06-04 19:24:03,530 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:03,979 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:03,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:27:02] 2025-06-04 19:24:04,171 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,303 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,311 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,359 | INFO     | [job] control thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,385 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,516 | INFO     | [payload] control thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,523 | INFO     | [data] control thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,526 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,532 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,674 | INFO     | [job] validate thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,788 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,893 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:04,989 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:05,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:27:02] 2025-06-04 19:24:09,408 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:27:02] 2025-06-04 19:24:10,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431980828480)>', '<ExcThread(monitor, started 140431753938688)>']
[2025-06-04 21:27:02] 2025-06-04 19:24:11,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:27:02] 2025-06-04 19:24:11,586 | INFO     | [monitor] control thread has ended
[2025-06-04 21:27:02] 2025-06-04 19:24:15,802 | INFO     | all workflow threads have been joined
[2025-06-04 21:27:02] 2025-06-04 19:24:15,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:27:02] 2025-06-04 19:24:15,803 | INFO     | traces error code: 0
[2025-06-04 21:27:02] 2025-06-04 19:24:15,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:27:02] 2025-06-04 19:24:16,288 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:27:02] 2025-06-04 19:24:16,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:27:02] 2025-06-04 19:24:16,378 [wrapper] pilotpid: 2298
[2025-06-04 21:27:02] 2025-06-04 19:24:16,458 [wrapper] Pilot exit status: 0
[2025-06-04 21:27:02] 2025-06-04 19:24:16,873 [wrapper] pandaids: 6678245679
[2025-06-04 21:27:02] 2025-06-04 19:24:17,660 [wrapper] cleanup supervisor_pilot 25381 2299
[2025-06-04 21:27:02] 2025-06-04 19:24:17,672 [wrapper] Test setup, not cleaning
[2025-06-04 21:27:02] 2025-06-04 19:24:17,683 [wrapper] apfmon messages muted
[2025-06-04 21:27:02] 2025-06-04 19:24:17,688 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:27:02] 2025-06-04 19:24:17,696 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:27:02]  *** Error codes and diagnostics ***
[2025-06-04 21:27:02]     "exeErrorCode": 0,
[2025-06-04 21:27:02]     "exeErrorDiag": "",
[2025-06-04 21:27:02]     "pilotErrorCode": 0,
[2025-06-04 21:27:02]     "pilotErrorDiag": "",
[2025-06-04 21:27:02]  *** Listing of results directory ***
[2025-06-04 21:27:02] total 394312
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc      5111 Jun  4 03:52 queuedata.json
[2025-06-04 21:27:02] -rwx------. 1 boinc boinc     37140 Jun  4 03:53 runpilot2-wrapper.sh
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc       100 Jun  4 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:27:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 17:21 run_atlas
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc       105 Jun  4 17:21 job.xml
[2025-06-04 21:27:02] -rw-r--r--. 2 boinc boinc 217563722 Jun  4 17:21 EVNT.45006593._002000.pool.root.1
[2025-06-04 21:27:02] -rw-r--r--. 2 boinc boinc    508880 Jun  4 17:21 input.tar.gz
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc      6390 Jun  4 17:21 init_data.xml
[2025-06-04 21:27:02] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:21 start_atlas.sh
[2025-06-04 21:27:02] drwxrwx--x. 2 boinc boinc        68 Jun  4 17:21 shared
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc         0 Jun  4 17:21 boinc_lockfile
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc      2525 Jun  4 17:21 pandaJob.out
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc    990989 Jun  4 17:24 agis_schedconf.cvmfs.json
[2025-06-04 21:27:02] drwx------. 4 boinc boinc      4096 Jun  4 17:24 pilot3
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc 179193659 Jun  4 21:21 HITS.45006595._049878.pool.root.1
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:21 boinc_task_state.xml
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc      1015 Jun  4 21:22 memory_monitor_summary.json
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc   1598969 Jun  4 21:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc    377674 Jun  4 21:22 log.45006595._049878.job.log.tgz.1
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc        95 Jun  4 21:23 pilot_heartbeat.json
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc      7684 Jun  4 21:23 heartbeat.json
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc      4539 Jun  4 21:24 pilotlog.txt
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc   1217858 Jun  4 21:24 log.45006595._049878.job.log.1
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc       357 Jun  4 21:24 output.list
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:24 runtime_log
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc   1617920 Jun  4 21:24 result.tar.gz
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc      8659 Jun  4 21:24 runtime_log.err
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc       657 Jun  4 21:24 aVHKDmdUsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdmmKDmlqnCum.diag
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:27 boinc_mmap_file
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:27 wrapper_checkpoint.txt
[2025-06-04 21:27:02] -rw-r--r--. 1 boinc boinc     20501 Jun  4 21:27 stderr.txt
[2025-06-04 21:27:02] HITS file was successfully produced:
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc 179193659 Jun  4 21:21 shared/HITS.pool.root.1
[2025-06-04 21:27:02]  *** Contents of shared directory: ***
[2025-06-04 21:27:02] total 389560
[2025-06-04 21:27:02] -rw-r--r--. 2 boinc boinc 217563722 Jun  4 17:21 ATLAS.root_0
[2025-06-04 21:27:02] -rw-r--r--. 2 boinc boinc    508880 Jun  4 17:21 input.tar.gz
[2025-06-04 21:27:02] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:21 start_atlas.sh
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc 179193659 Jun  4 21:21 HITS.pool.root.1
[2025-06-04 21:27:02] -rw-------. 1 boinc boinc   1617920 Jun  4 21:24 result.tar.gz
21:27:04 (30954): run_atlas exited; CPU time 51714.383851
21:27:04 (30954): called boinc_finish(0)

</stderr_txt>
]]>

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