Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:18:57 (261726): wrapper (7.7.26015): starting
02:18:57 (261726): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:18:57] Arguments: --nthreads 8
[2025-06-04 02:18:57] Threads: 8
[2025-06-04 02:18:57] Checking for CVMFS
[2025-06-04 02:18:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:18:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:18:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:18:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:18:57] 2.12.6.0 4995 36943 562772 146771 0 281 20284691 32935936 25059 16776704 1 465773401 99.681 381278826 12505 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 02:18:57] CVMFS is ok
[2025-06-04 02:18:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:18:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:18:57] Further information can be found at the LHC@home message board.
[2025-06-04 02:18:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:18:57] Checking for apptainer binary...
[2025-06-04 02:18:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:18:57] Running /usr/bin/apptainer --version
[2025-06-04 02:18:57] apptainer version 1.4.1-1.el9
[2025-06-04 02:18:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:18:58] c7-6-31.aglt2.org
[2025-06-04 02:18:58] apptainer works
[2025-06-04 02:18:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:18:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:18:58] Starting ATLAS job with PandaID=6678075681
[2025-06-04 02:18:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:18:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:18:21]  guid=82ebd2ec-7ee5-400c-825e-fac846e7c4d5
[2025-06-04 03:18:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 03:18:21]  is_altstaged=None
[2025-06-04 03:18:21]  is_tar=False
[2025-06-04 03:18:21]  lfn=log.45006595._046288.job.log.tgz.1
[2025-06-04 03:18:21]  mtime=0
[2025-06-04 03:18:21]  protocol_id=None
[2025-06-04 03:18:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:18:21]  replicas=None
[2025-06-04 03:18:21]  scope=mc23_13p6TeV
[2025-06-04 03:18:21]  status=None
[2025-06-04 03:18:21]  status_code=0
[2025-06-04 03:18:21]  storage_token=
[2025-06-04 03:18:21]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678075681/log.45006595._046288.job.log.tgz.1
[2025-06-04 03:18:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/dc/log.45006595._046288.job.log.tgz.1
[2025-06-04 03:18:21]  workdir=None
[2025-06-04 03:18:21] ]
[2025-06-04 03:18:21] 2025-06-04 07:17:53,174 | INFO     | transferring file log.45006595._046288.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678075681/log.45006595._046288.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 03:18:21] 2025-06-04 07:17:53,174 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678075681/log.45006595._046288.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._046288.job
[2025-06-04 03:18:21] 2025-06-04 07:17:53,199 | INFO     | adding to output.list: log.45006595._046288.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/dc/log.45006595._046288.job.log.tg
[2025-06-04 03:18:21] 2025-06-04 07:17:53,200 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:18:21] 2025-06-04 07:17:53,200 | INFO     | summary of transferred files:
[2025-06-04 03:18:21] 2025-06-04 07:17:53,200 | INFO     |  -- lfn=log.45006595._046288.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:18:21] 2025-06-04 07:17:53,200 | INFO     | stage-out finished correctly
[2025-06-04 03:18:21] 2025-06-04 07:17:54,790 | INFO     | monitor loop #258: job 0:6678075681 is in state 'finished'
[2025-06-04 03:18:21] 2025-06-04 07:17:54,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:18:21] 2025-06-04 07:17:56,010 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:18:21] 2025-06-04 07:17:56,088 | INFO     | job 6678075681 has state=finished
[2025-06-04 03:18:21] 2025-06-04 07:17:56,088 | INFO     | preparing for final server update for job 6678075681 in state='finished'
[2025-06-04 03:18:21] 2025-06-04 07:17:56,088 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:18:21] 2025-06-04 07:17:56,088 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:18:21] 2025-06-04 07:17:56,089 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:18:21] 2025-06-04 07:17:56,089 | INFO     | job 6678075681 has finished - writing final server update
[2025-06-04 03:18:21] 2025-06-04 07:17:56,089 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:18:21] 2025-06-04 07:17:56,108 | INFO     | executing command: lscpu
[2025-06-04 03:18:21] 2025-06-04 07:17:56,205 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:18:21] 2025-06-04 07:17:57,293 | INFO     | monitor loop #259: job 0:6678075681 is in state 'finished'
[2025-06-04 03:18:21] 2025-06-04 07:17:57,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:18:21] 2025-06-04 07:17:59,796 | INFO     | monitor loop #260: job 0:6678075681 is in state 'finished'
[2025-06-04 03:18:21] 2025-06-04 07:17:59,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:18:21] 2025-06-04 07:18:00,633 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 03:18:21] 2025-06-04 07:18:00,633 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678075681/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:18:21] 2025-06-04 07:18:00,634 | INFO     | extracted standard info from prmon json
[2025-06-04 03:18:21] 2025-06-04 07:18:00,634 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:18:21] 2025-06-04 07:18:00,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:18:21] 2025-06-04 07:18:00,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:18:21] 2025-06-04 07:18:00,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:18:21] 2025-06-04 07:18:00,636 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:18:21] 2025-06-04 07:18:00,636 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 03:18:21] 2025-06-04 07:18:00,636 | INFO     | sum of deviations: 5938301139.000001
[2025-06-04 03:18:21] 2025-06-04 07:18:00,636 | INFO     | mean x: 1749019804.0
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | mean y: 2303307.6666666665
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | -- intersect: -252598656494.33173
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | intersect: -252598656494.33173
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | chi2: 0.6860185151057329
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | -- intersect: -252598656494.33173
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | current memory leak: 144.42 B/s (using 51 data points, chi2=0.69)
[2025-06-04 03:18:21] 2025-06-04 07:18:00,637 | INFO     | ..............................
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . Timing measurements:
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . get job = 0 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . initial setup = 2 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . payload setup = 6 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . stage-in = 0 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . payload execution = 3499 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . stage-out = 0 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | . log creation = 0 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,638 | INFO     | ..............................
[2025-06-04 03:18:21] 2025-06-04 07:18:00,716 | INFO     | 
[2025-06-04 03:18:21] 2025-06-04 07:18:00,716 | INFO     | job summary report
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | --------------------------------------------------
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | PanDA job id: 6678075681
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | task id: 45006595
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | errors: (none)
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | pilot state: finished 
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | transexitcode: 0
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | exeerrorcode: 0
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | exeerrordiag: 
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | exitcode: 0
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | exitmsg: OK
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | cpuconsumptiontime: 23365 s
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | nevents: 400
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | neventsw: 0
[2025-06-04 03:18:21] 2025-06-04 07:18:00,717 | INFO     | pid: 272614
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | pgrp: 272614
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | corecount: 8
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | event service: False
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | sizes: {0: 2405182, 1: 2405182, 5: 2405416, 11: 2405472, 3509: 2431048, 3510: 2439989, 3513: 2440173, 3518: 2440343}
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | --------------------------------------------------
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | 
[2025-06-04 03:18:21] 2025-06-04 07:18:00,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 03:18:21] 2025-06-04 07:18:00,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | job 6678075681 has completed (purged errors)
[2025-06-04 03:18:21] 2025-06-04 07:18:00,749 | INFO     | overall cleanup function is called
[2025-06-04 03:18:21] 2025-06-04 07:18:01,757 | INFO     | --- collectZombieJob: --- 10, [272614]
[2025-06-04 03:18:21] 2025-06-04 07:18:01,757 | INFO     | zombie collector waiting for pid 272614
[2025-06-04 03:18:21] 2025-06-04 07:18:01,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:18:21] 2025-06-04 07:18:01,758 | INFO     | collected zombie processes
[2025-06-04 03:18:21] 2025-06-04 07:18:01,758 | INFO     | will attempt to kill all subprocesses of pid=272614
[2025-06-04 03:18:21] 2025-06-04 07:18:02,231 | INFO     | process IDs to be killed: [272614] (in reverse order)
[2025-06-04 03:18:21] 2025-06-04 07:18:02,363 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:18:21] 2025-06-04 07:18:02,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:18:21] 2025-06-04 07:18:02,384 | INFO     | did not find any defunct processes belonging to 272614
[2025-06-04 03:18:21] 2025-06-04 07:18:02,407 | INFO     | did not find any defunct processes belonging to 272614
[2025-06-04 03:18:21] 2025-06-04 07:18:02,407 | INFO     | ready for new job
[2025-06-04 03:18:21] 2025-06-04 07:18:02,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:18:21] 2025-06-04 07:18:02,410 | INFO     | **************************************
[2025-06-04 03:18:21] 2025-06-04 07:18:02,410 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:18:21] 2025-06-04 07:18:02,410 | INFO     | **************************************
[2025-06-04 03:18:21] 2025-06-04 07:18:02,410 | INFO     | 
[2025-06-04 03:18:21] 2025-06-04 07:18:02,428 | INFO     | architecture information:
[2025-06-04 03:18:21] 2025-06-04 07:18:02,429 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:18:21] 2025-06-04 07:18:02,448 | INFO     | cat /etc/os-release:
[2025-06-04 03:18:21] NAME="CentOS Linux"
[2025-06-04 03:18:21] VERSION="7 (Core)"
[2025-06-04 03:18:21] ID="centos"
[2025-06-04 03:18:21] ID_LIKE="rhel fedora"
[2025-06-04 03:18:21] VERSION_ID="7"
[2025-06-04 03:18:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:18:21] ANSI_COLOR="0;31"
[2025-06-04 03:18:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:18:21] HOME_URL="https://www.centos.org/"
[2025-06-04 03:18:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:18:21] 
[2025-06-04 03:18:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:18:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:18:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:18:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:18:21] 
[2025-06-04 03:18:21] 2025-06-04 07:18:02,448 | INFO     | **************************************
[2025-06-04 03:18:21] 2025-06-04 07:18:02,950 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 03:18:21] 2025-06-04 07:18:02,970 | INFO     | sufficient remaining disk space (75596038144 B)
[2025-06-04 03:18:21] 2025-06-04 07:18:02,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:18:21] 2025-06-04 07:18:02,970 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:18:21] 2025-06-04 07:18:02,970 | INFO     | update_server=False
[2025-06-04 03:18:21] 2025-06-04 07:18:02,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:18:21] 2025-06-04 07:18:02,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:18:21] 2025-06-04 07:18:03,125 | INFO     | all job control threads have been joined
[2025-06-04 03:18:21] 2025-06-04 07:18:03,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:18:21] 2025-06-04 07:18:03,304 | INFO     | aborting loop
[2025-06-04 03:18:21] 2025-06-04 07:18:03,426 | INFO     | all data control threads have been joined
[2025-06-04 03:18:21] 2025-06-04 07:18:03,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:18:21] 2025-06-04 07:18:03,825 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:18:21] 2025-06-04 07:18:03,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:18:21] 2025-06-04 07:18:03,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:18:21] 2025-06-04 07:18:03,976 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,017 | INFO     | all payload control threads have been joined
[2025-06-04 03:18:21] 2025-06-04 07:18:04,130 | INFO     | [job] control thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,193 | INFO     | [job] validate thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,309 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,395 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,432 | INFO     | [data] control thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,490 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,514 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,675 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:04,965 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:05,022 | INFO     | [payload] control thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:05,412 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:05,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:18:21] 2025-06-04 07:18:05,790 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:06,730 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:06,977 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:13,055 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:18:21] 2025-06-04 07:18:14,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:18:21] 2025-06-04 07:18:15,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673561978688)>', '<ExcThread(monitor, started 140672921233152)>']
[2025-06-04 03:18:21] 2025-06-04 07:18:16,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:18:21] 2025-06-04 07:18:16,885 | INFO     | [monitor] control thread has ended
[2025-06-04 03:18:21] 2025-06-04 07:18:21,011 | INFO     | all workflow threads have been joined
[2025-06-04 03:18:21] 2025-06-04 07:18:21,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:18:21] 2025-06-04 07:18:21,012 | INFO     | traces error code: 0
[2025-06-04 03:18:21] 2025-06-04 07:18:21,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:18:21] 2025-06-04 07:18:21,153 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:18:21] 2025-06-04 07:18:21,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:18:21] 2025-06-04 07:18:21,159 [wrapper] pilotpid: 265858
[2025-06-04 03:18:21] 2025-06-04 07:18:21,161 [wrapper] Pilot exit status: 0
[2025-06-04 03:18:21] 2025-06-04 07:18:21,173 [wrapper] pandaids: 6678075681
[2025-06-04 03:18:21] 2025-06-04 07:18:21,287 [wrapper] cleanup supervisor_pilot  579205 265859
[2025-06-04 03:18:21] 2025-06-04 07:18:21,290 [wrapper] Test setup, not cleaning
[2025-06-04 03:18:21] 2025-06-04 07:18:21,294 [wrapper] apfmon messages muted
[2025-06-04 03:18:21] 2025-06-04 07:18:21,297 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:18:21] 2025-06-04 07:18:21,300 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:18:21]  *** Error codes and diagnostics ***
[2025-06-04 03:18:21]     "exeErrorCode": 0,
[2025-06-04 03:18:21]     "exeErrorDiag": "",
[2025-06-04 03:18:21]     "pilotErrorCode": 0,
[2025-06-04 03:18:21]     "pilotErrorDiag": "",
[2025-06-04 03:18:21]  *** Listing of results directory ***
[2025-06-04 03:18:21] total 391764
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:41 pilot3.tar.gz
[2025-06-04 03:18:21] -rwx------. 1 boincer umatlas     37140 Jun  3 17:47 runpilot2-wrapper.sh
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 17:47 queuedata.json
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:18:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 02:18 run_atlas
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 02:18 job.xml
[2025-06-04 03:18:21] -rw-r--r--. 2 boincer umatlas 213290507 Jun  4 02:18 EVNT.45006593._001857.pool.root.1
[2025-06-04 03:18:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:18 start_atlas.sh
[2025-06-04 03:18:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 02:18 shared
[2025-06-04 03:18:21] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 02:18 input.tar.gz
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 02:18 boinc_lockfile
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 02:18 pandaJob.out
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas    986745 Jun  4 02:19 agis_schedconf.cvmfs.json
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas   1603667 Jun  4 02:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:18:21] drwx------. 4 boincer umatlas      4096 Jun  4 02:19 pilot3
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 03:10 init_data.xml
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas       529 Jun  4 03:17 boinc_task_state.xml
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas 182747502 Jun  4 03:17 HITS.45006595._046288.pool.root.1
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas      1035 Jun  4 03:17 memory_monitor_summary.json
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas    283044 Jun  4 03:17 log.45006595._046288.job.log.tgz.1
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas      7689 Jun  4 03:18 heartbeat.json
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas        95 Jun  4 03:18 pilot_heartbeat.json
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 03:18 boinc_mmap_file
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas        27 Jun  4 03:18 wrapper_checkpoint.txt
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas      4425 Jun  4 03:18 pilotlog.txt
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas    359038 Jun  4 03:18 log.45006595._046288.job.log.1
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas       357 Jun  4 03:18 output.list
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 03:18 runtime_log
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas    665600 Jun  4 03:18 result.tar.gz
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 03:18 runtime_log.err
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas       652 Jun  4 03:18 7rMNDm7eog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmU2ZKDm45Um0m.diag
[2025-06-04 03:18:21] -rw-r--r--. 1 boincer umatlas     21287 Jun  4 03:18 stderr.txt
[2025-06-04 03:18:21] HITS file was successfully produced:
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas 182747502 Jun  4 03:17 shared/HITS.pool.root.1
[2025-06-04 03:18:21]  *** Contents of shared directory: ***
[2025-06-04 03:18:21] total 387936
[2025-06-04 03:18:21] -rw-r--r--. 2 boincer umatlas 213290507 Jun  4 02:18 ATLAS.root_0
[2025-06-04 03:18:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:18 start_atlas.sh
[2025-06-04 03:18:21] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 02:18 input.tar.gz
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas 182747502 Jun  4 03:17 HITS.pool.root.1
[2025-06-04 03:18:21] -rw-------. 1 boincer umatlas    665600 Jun  4 03:18 result.tar.gz
03:18:23 (261726): run_atlas exited; CPU time 23495.982008
03:18:23 (261726): called boinc_finish(0)

</stderr_txt>
]]>

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