Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:51:32 (1734535): wrapper (7.7.26015): starting
11:51:32 (1734535): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 11:51:32] Arguments: --nthreads 4
[2025-06-05 11:51:32] Threads: 4
[2025-06-05 11:51:32] Checking for CVMFS
[2025-06-05 11:51:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:51:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:51:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:51:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:51:33] 2.12.7.0 94760 3522 60856 146814 1 56 2819710 4096001 917 130560 1 4628321 99.994 840789 5796 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-06-05 11:51:33] CVMFS is ok
[2025-06-05 11:51:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:51:33] Checking for apptainer binary...
[2025-06-05 11:51:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:51:33] Running /usr/bin/apptainer --version
[2025-06-05 11:51:33] apptainer version 1.4.0
[2025-06-05 11:51:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:51:33] TC-910
[2025-06-05 11:51:33] apptainer works
[2025-06-05 11:51:33] Set ATHENA_PROC_NUMBER=4
[2025-06-05 11:51:33] Set ATHENA_CORE_NUMBER=4
[2025-06-05 11:51:33] Starting ATLAS job with PandaID=6678245519
[2025-06-05 11:51:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:40:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:40:41] 2025-06-05 11:40:24,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:40:41] 2025-06-05 11:40:24,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:40:41] 2025-06-05 11:40:24,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:40:41] 2025-06-05 11:40:24,859 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:40:41] 2025-06-05 11:40:24,859 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 13:40:41] 2025-06-05 11:40:24,860 | INFO     | sum of deviations: -1249963443.9999998
[2025-06-05 13:40:41] 2025-06-05 11:40:24,860 | INFO     | mean x: 1749120351.0
[2025-06-05 13:40:41] 2025-06-05 11:40:24,860 | INFO     | mean y: 2396547.9813084113
[2025-06-05 13:40:41] 2025-06-05 11:40:24,860 | INFO     | -- intersect: 5758454826.284817
[2025-06-05 13:40:41] 2025-06-05 11:40:24,860 | INFO     | intersect: 5758454826.284817
[2025-06-05 13:40:41] 2025-06-05 11:40:24,860 | INFO     | chi2: 1.5182339801009341
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | sum of deviations: -846390890.5000013
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | mean x: 1749120198.5
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | mean y: 2397743.0098039214
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | -- intersect: 4501785696.803498
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | intersect: 4501785696.803498
[2025-06-05 13:40:41] 2025-06-05 11:40:24,861 | INFO     | chi2: 1.5196029846935977
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | current chi2=1.5196029846935977 (change=-0.09017085710152022 %)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | right removable region: 101
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | sum of deviations: -12539409184.999996
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | mean x: 1749120503.5
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | mean y: 2429276.294117647
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | -- intersect: 66661554635.54424
[2025-06-05 13:40:41] 2025-06-05 11:40:24,862 | INFO     | intersect: 66661554635.54424
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | chi2: 0.17681369147310233
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | current chi2=0.17681369147310233 (change=88.35398931979196 %)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | sum of deviations: -7855699620.999999
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | mean x: 1749120656.0
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | mean y: 2413746.3608247424
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | -- intersect: 48560008972.08677
[2025-06-05 13:40:41] 2025-06-05 11:40:24,863 | INFO     | intersect: 48560008972.08677
[2025-06-05 13:40:41] 2025-06-05 11:40:24,864 | INFO     | chi2: 0.14483647682399392
[2025-06-05 13:40:41] 2025-06-05 11:40:24,864 | INFO     | current chi2=0.14483647682399392 (change=18.085259338625892 %)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,864 | INFO     | left removable region: 20
[2025-06-05 13:40:41] 2025-06-05 11:40:24,864 | INFO     | sufficient remaining disk space (163178348544 B)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,864 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | sum of deviations: 1153316996.0000007
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | mean x: 1749120778.0
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | mean y: 2379651.049382716
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | -- intersect: -12240996958.987501
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | intersect: -12240996958.987501
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | chi2: 0.010810422226789382
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | -- intersect: -12240996958.987501
[2025-06-05 13:40:41] 2025-06-05 11:40:24,865 | INFO     | current memory leak: 7.00 B/s (using 81 data points, chi2=0.01)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | ..............................
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . Timing measurements:
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . get job = 0 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . initial setup = 1 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . payload setup = 3 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . stage-in = 0 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . payload execution = 6499 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . stage-out = 0 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | . log creation = 0 s
[2025-06-05 13:40:41] 2025-06-05 11:40:24,866 | INFO     | ..............................
[2025-06-05 13:40:41] 2025-06-05 11:40:24,932 | INFO     | size of work directory /var/lib/boinc2/slots/0/PanDA_Pilot-6678245519: 3064910 B (within 2537553920 B limit)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,932 | INFO     | pfn file=/var/lib/boinc2/slots/0/PanDA_Pilot-6678245519/HITS.45006595._049718.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,932 | INFO     | total size of present files: 0 B (workdir size: 3064910 B)
[2025-06-05 13:40:41] 2025-06-05 11:40:24,932 | INFO     | output file size check: skipping output file /var/lib/boinc2/slots/0/PanDA_Pilot-6678245519/HITS.45006595._049718.pool.root.1 since it does not exist
[2025-06-05 13:40:41] 2025-06-05 11:40:24,992 | INFO     | number of running child processes to parent process 1744614: 1
[2025-06-05 13:40:41] 2025-06-05 11:40:24,992 | INFO     | maximum number of monitored processes: 6
[2025-06-05 13:40:41] 2025-06-05 11:40:24,993 | INFO     | aborting job monitoring since job object (job id=6678245519) has expired
[2025-06-05 13:40:41] 2025-06-05 11:40:25,369 | INFO     | 
[2025-06-05 13:40:41] 2025-06-05 11:40:25,369 | INFO     | job summary report
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | --------------------------------------------------
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | PanDA job id: 6678245519
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | task id: 45006595
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | errors: (none)
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | pilot state: finished 
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | transexitcode: 0
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | exeerrorcode: 0
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | exeerrordiag: 
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | exitcode: 0
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | exitmsg: OK
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | cpuconsumptiontime: 24711 s
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | nevents: 400
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | neventsw: 0
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | pid: 1744614
[2025-06-05 13:40:41] 2025-06-05 11:40:25,370 | INFO     | pgrp: 1744614
[2025-06-05 13:40:41] 2025-06-05 11:40:25,371 | INFO     | corecount: 4
[2025-06-05 13:40:41] 2025-06-05 11:40:25,371 | INFO     | event service: False
[2025-06-05 13:40:41] 2025-06-05 11:40:25,371 | INFO     | sizes: {0: 2397343, 2: 2397549, 11: 2397577, 6506: 2424555, 6508: 2433554, 6513: 2433668}
[2025-06-05 13:40:41] 2025-06-05 11:40:25,371 | INFO     | --------------------------------------------------
[2025-06-05 13:40:41] 2025-06-05 11:40:25,371 | INFO     | 
[2025-06-05 13:40:41] 2025-06-05 11:40:25,371 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-05 13:40:41] 2025-06-05 11:40:25,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | job 6678245519 has completed (purged errors)
[2025-06-05 13:40:41] 2025-06-05 11:40:25,383 | INFO     | overall cleanup function is called
[2025-06-05 13:40:41] 2025-06-05 11:40:26,390 | INFO     | --- collectZombieJob: --- 10, [1744614]
[2025-06-05 13:40:41] 2025-06-05 11:40:26,390 | INFO     | zombie collector waiting for pid 1744614
[2025-06-05 13:40:41] 2025-06-05 11:40:26,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:40:41] 2025-06-05 11:40:26,390 | INFO     | collected zombie processes
[2025-06-05 13:40:41] 2025-06-05 11:40:26,390 | INFO     | will attempt to kill all subprocesses of pid=1744614
[2025-06-05 13:40:41] 2025-06-05 11:40:26,453 | INFO     | process IDs to be killed: [1744614] (in reverse order)
[2025-06-05 13:40:41] 2025-06-05 11:40:26,477 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:40:41] 2025-06-05 11:40:26,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:40:41] 2025-06-05 11:40:26,479 | INFO     | did not find any defunct processes belonging to 1744614
[2025-06-05 13:40:41] 2025-06-05 11:40:26,481 | INFO     | did not find any defunct processes belonging to 1744614
[2025-06-05 13:40:41] 2025-06-05 11:40:26,481 | INFO     | ready for new job
[2025-06-05 13:40:41] 2025-06-05 11:40:26,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:40:41] 2025-06-05 11:40:26,482 | INFO     | **************************************
[2025-06-05 13:40:41] 2025-06-05 11:40:26,482 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:40:41] 2025-06-05 11:40:26,482 | INFO     | **************************************
[2025-06-05 13:40:41] 2025-06-05 11:40:26,482 | INFO     | 
[2025-06-05 13:40:41] 2025-06-05 11:40:26,483 | INFO     | architecture information:
[2025-06-05 13:40:41] 2025-06-05 11:40:26,483 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:40:41] 2025-06-05 11:40:26,490 | INFO     | cat /etc/os-release:
[2025-06-05 13:40:41] NAME="CentOS Linux"
[2025-06-05 13:40:41] VERSION="7 (Core)"
[2025-06-05 13:40:41] ID="centos"
[2025-06-05 13:40:41] ID_LIKE="rhel fedora"
[2025-06-05 13:40:41] VERSION_ID="7"
[2025-06-05 13:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:40:41] ANSI_COLOR="0;31"
[2025-06-05 13:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:40:41] HOME_URL="https://www.centos.org/"
[2025-06-05 13:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:40:41] 
[2025-06-05 13:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:40:41] 
[2025-06-05 13:40:41] 2025-06-05 11:40:26,491 | INFO     | **************************************
[2025-06-05 13:40:41] 2025-06-05 11:40:26,993 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 13:40:41] 2025-06-05 11:40:27,002 | INFO     | sufficient remaining disk space (163182542848 B)
[2025-06-05 13:40:41] 2025-06-05 11:40:27,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:40:41] 2025-06-05 11:40:27,002 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:40:41] 2025-06-05 11:40:27,002 | INFO     | update_server=False
[2025-06-05 13:40:41] 2025-06-05 11:40:27,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:40:41] 2025-06-05 11:40:27,003 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:40:41] 2025-06-05 11:40:27,003 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:40:41] 2025-06-05 11:40:27,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:40:41] 2025-06-05 11:40:27,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:40:41] 2025-06-05 11:40:27,449 | INFO     | all job control threads have been joined
[2025-06-05 13:40:41] 2025-06-05 11:40:27,495 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 13:40:41] 2025-06-05 11:40:27,496 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 13:40:41] 2025-06-05 11:40:27,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:40:41] 2025-06-05 11:40:27,496 | INFO     | will abort loop
[2025-06-05 13:40:41] 2025-06-05 11:40:27,570 | INFO     | all data control threads have been joined
[2025-06-05 13:40:41] 2025-06-05 11:40:27,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:40:41] 2025-06-05 11:40:27,909 | INFO     | all payload control threads have been joined
[2025-06-05 13:40:41] 2025-06-05 11:40:28,004 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,083 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,257 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,434 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,455 | INFO     | [job] control thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,501 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,533 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,573 | INFO     | [data] control thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,877 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:28,913 | INFO     | [payload] control thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:29,267 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:29,443 | INFO     | [job] validate thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:29,845 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:29,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:40:41] 2025-06-05 11:40:30,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:40:41] 2025-06-05 11:40:30,942 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:34,406 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:40:41] 2025-06-05 11:40:36,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136427175642944)>', '<ExcThread(monitor, started 136426414929664)>']
[2025-06-05 13:40:41] 2025-06-05 11:40:37,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:40:41] 2025-06-05 11:40:37,052 | INFO     | [monitor] control thread has ended
[2025-06-05 13:40:41] 2025-06-05 11:40:41,417 | INFO     | all workflow threads have been joined
[2025-06-05 13:40:41] 2025-06-05 11:40:41,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:40:41] 2025-06-05 11:40:41,417 | INFO     | traces error code: 0
[2025-06-05 13:40:41] 2025-06-05 11:40:41,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:40:41] 2025-06-05 11:40:41,487 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:40:41] 2025-06-05 11:40:41,489 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:40:41] 2025-06-05 11:40:41,490 [wrapper] pilotpid: 1738151
[2025-06-05 13:40:41] 2025-06-05 11:40:41,492 [wrapper] Pilot exit status: 0
[2025-06-05 13:40:41] 2025-06-05 11:40:41,497 [wrapper] pandaids: 6678245519
[2025-06-05 13:40:41] 2025-06-05 11:40:41,514 [wrapper] cleanup supervisor_pilot 1784710 1738152
[2025-06-05 13:40:41] 2025-06-05 11:40:41,515 [wrapper] Test setup, not cleaning
[2025-06-05 13:40:41] 2025-06-05 11:40:41,517 [wrapper] apfmon messages muted
[2025-06-05 13:40:41] 2025-06-05 11:40:41,518 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:40:41] 2025-06-05 11:40:41,520 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:40:41]  *** Error codes and diagnostics ***
[2025-06-05 13:40:41]     "exeErrorCode": 0,
[2025-06-05 13:40:41]     "exeErrorDiag": "",
[2025-06-05 13:40:41]     "pilotErrorCode": 0,
[2025-06-05 13:40:41]     "pilotErrorDiag": "",
[2025-06-05 13:40:41]  *** Listing of results directory ***
[2025-06-05 13:40:41] insgesamt 388952
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc    495897  4. Jun 02:59 pilot3.tar.gz
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc      5111  4. Jun 03:08 queuedata.json
[2025-06-05 13:40:41] -rwx------ 1 boinc boinc     37140  4. Jun 03:09 runpilot2-wrapper.sh
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc       100  5. Jun 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:40:41] -rwxr-xr-x 1 boinc boinc      7986  5. Jun 11:51 run_atlas
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc       105  5. Jun 11:51 job.xml
[2025-06-05 13:40:41] -rw-r--r-- 2 boinc boinc     15093  5. Jun 11:51 start_atlas.sh
[2025-06-05 13:40:41] drwxrwx--x 2 boinc boinc      4096  5. Jun 11:51 shared
[2025-06-05 13:40:41] -rw-r--r-- 2 boinc boinc    508880  5. Jun 11:51 input.tar.gz
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc      9810  5. Jun 11:51 init_data.xml
[2025-06-05 13:40:41] -rw-r--r-- 2 boinc boinc 213981759  5. Jun 11:51 EVNT.45006593._001993.pool.root.1
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc         0  5. Jun 11:51 boinc_lockfile
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc      2525  5. Jun 11:51 pandaJob.out
[2025-06-05 13:40:41] -rw------- 1 boinc boinc    983289  5. Jun 11:51 agis_schedconf.cvmfs.json
[2025-06-05 13:40:41] -rw------- 1 boinc boinc   1598969  5. Jun 11:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:40:41] drwx------ 4 boinc boinc      4096  5. Jun 11:51 pilot3
[2025-06-05 13:40:41] -rw------- 1 boinc boinc        95  5. Jun 13:39 pilot_heartbeat.json
[2025-06-05 13:40:41] -rw------- 1 boinc boinc 178649168  5. Jun 13:39 HITS.45006595._049718.pool.root.1
[2025-06-05 13:40:41] -rw------- 1 boinc boinc      1017  5. Jun 13:40 memory_monitor_summary.json
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc       529  5. Jun 13:40 boinc_task_state.xml
[2025-06-05 13:40:41] -rw------- 1 boinc boinc    269830  5. Jun 13:40 log.45006595._049718.job.log.tgz.1
[2025-06-05 13:40:41] -rw------- 1 boinc boinc      7645  5. Jun 13:40 heartbeat.json
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc      8192  5. Jun 13:40 boinc_mmap_file
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc        27  5. Jun 13:40 wrapper_checkpoint.txt
[2025-06-05 13:40:41] -rw------- 1 boinc boinc      4664  5. Jun 13:40 pilotlog.txt
[2025-06-05 13:40:41] -rw------- 1 boinc boinc    639323  5. Jun 13:40 log.45006595._049718.job.log.1
[2025-06-05 13:40:41] -rw------- 1 boinc boinc       357  5. Jun 13:40 output.list
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc       620  5. Jun 13:40 runtime_log
[2025-06-05 13:40:41] -rw------- 1 boinc boinc    931840  5. Jun 13:40 result.tar.gz
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc      8636  5. Jun 13:40 runtime_log.err
[2025-06-05 13:40:41] -rw------- 1 boinc boinc       642  5. Jun 13:40 MI9MDmIorg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmikmKDmmWofun.diag
[2025-06-05 13:40:41] -rw-r--r-- 1 boinc boinc     20943  5. Jun 13:40 stderr.txt
[2025-06-05 13:40:41] HITS file was successfully produced:
[2025-06-05 13:40:41] -rw------- 1 boinc boinc 178649168  5. Jun 13:39 shared/HITS.pool.root.1
[2025-06-05 13:40:41]  *** Contents of shared directory: ***
[2025-06-05 13:40:41] insgesamt 384864
[2025-06-05 13:40:41] -rw-r--r-- 2 boinc boinc     15093  5. Jun 11:51 start_atlas.sh
[2025-06-05 13:40:41] -rw-r--r-- 2 boinc boinc    508880  5. Jun 11:51 input.tar.gz
[2025-06-05 13:40:41] -rw-r--r-- 2 boinc boinc 213981759  5. Jun 11:51 ATLAS.root_0
[2025-06-05 13:40:41] -rw------- 1 boinc boinc 178649168  5. Jun 13:39 HITS.pool.root.1
[2025-06-05 13:40:41] -rw------- 1 boinc boinc    931840  5. Jun 13:40 result.tar.gz
13:40:42 (1734535): run_atlas exited; CPU time 24771.919740
13:40:42 (1734535): called boinc_finish(0)

</stderr_txt>
]]>

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