Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:20:50 (4166236): wrapper (7.7.26015): starting
23:20:50 (4166236): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 23:20:50] Arguments: --nthreads 12
[2025-06-03 23:20:50] Threads: 12
[2025-06-03 23:20:50] Checking for CVMFS
[2025-06-03 23:20:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:20:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:20:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:20:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:20:51] 2.11.5.0 740348 23287 225960 146770 2 348 42238635 45568000 22264 130560 0 235330485 99.817 141446958 26589 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 23:20:51] CVMFS is ok
[2025-06-03 23:20:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:20:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:20:51] Further information can be found at the LHC@home message board.
[2025-06-03 23:20:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:20:51] Checking for apptainer binary...
[2025-06-03 23:20:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:20:51] Running /usr/bin/apptainer --version
[2025-06-03 23:20:51] apptainer version 1.4.0-1.el9
[2025-06-03 23:20:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:20:51] wns0100.triumf.lcg
[2025-06-03 23:20:51] apptainer works
[2025-06-03 23:20:51] Set ATHENA_PROC_NUMBER=12
[2025-06-03 23:20:51] Set ATHENA_CORE_NUMBER=12
[2025-06-03 23:20:52] Starting ATLAS job with PandaID=6678287208
[2025-06-03 23:20:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:24:34]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | INFO     | extracted standard info from prmon json
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | found no stored workdir sizes
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | wrong length of table data, x=[1749018103.0], y=[2800.0] (must be same and length>=4)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | ..............................
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . Timing measurements:
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . get job = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . initial setup = 3 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . payload setup = 7 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . stage-in = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . payload execution = 28 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . stage-out = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . log creation = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | ..............................
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678287208/pilotlog.txt
[2025-06-03 23:24:34] 2025-06-04 06:24:17,818 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 23:24:34] - Log from pilotlog.txt -
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | INFO     | extracted standard info from prmon json
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | found no stored workdir sizes
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | wrong length of table data, x=[1749018103.0], y=[2800.0] (must be same and length>=4)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | ..............................
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . Timing measurements:
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . get job = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . initial setup = 3 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . payload setup = 7 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . stage-in = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . payload execution = 28 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . stage-out = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . log creation = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | ..............................
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678287208/pilotlog.txt
[2025-06-03 23:24:34] 2025-06-04 06:24:17,818 | WARNING  | 
[2025-06-03 23:24:34] [begin log extracts]
[2025-06-03 23:24:34] - Log from pilotlog.txt -
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | INFO     | extracted standard info from prmon json
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:24:34] 2025-06-04 06:24:17,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | found no stored workdir sizes
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 23:24:34] 2025-06-04 06:24:17,774 | WARNING  | wrong length of table data, x=[1749018103.0], y=[2800.0] (must be same and length>=4)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | ..............................
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . Timing measurements:
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . get job = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . initial setup = 3 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . payload setup = 7 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . stage-in = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . payload execution = 28 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . stage-out = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | . log creation = 0 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | ..............................
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:24:34] 2025-06-04 06:24:17,775 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678287208/pilotlog.txt
[2025-06-03 23:24:34] [end log extracts]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,818 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,819 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | 
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | job summary report
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | --------------------------------------------------
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | PanDA job id: 6678287208
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | task id: 45006595
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 23:21:57,328 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | pilot state: failed 
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | transexitcode: 65
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | exeerrorcode: 65
[2025-06-03 23:24:34] 2025-06-04 06:24:17,877 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | exitcode: 65
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | nevents: 0
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | neventsw: 0
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | pid: 4179445
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | pgrp: 4179445
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | corecount: 12
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | event service: False
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | sizes: {0: 2404350, 1: 2405032, 2: 2405231, 3: 2405231, 7: 2405465, 13: 2405493, 39: 2428879, 41: 2433114, 45: 2433142, 172: 2433284}
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | --------------------------------------------------
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | 
[2025-06-03 23:24:34] 2025-06-04 06:24:17,878 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 23:24:34] 2025-06-04 06:24:17,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:24:34] 2025-06-04 06:24:17,895 | INFO     | job 6678287208 has completed (purged errors)
[2025-06-03 23:24:34] 2025-06-04 06:24:17,896 | INFO     | overall cleanup function is called
[2025-06-03 23:24:34] 2025-06-04 06:24:18,902 | INFO     | --- collectZombieJob: --- 10, [4179445]
[2025-06-03 23:24:34] 2025-06-04 06:24:18,902 | INFO     | zombie collector waiting for pid 4179445
[2025-06-03 23:24:34] 2025-06-04 06:24:18,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:24:34] 2025-06-04 06:24:18,906 | INFO     | collected zombie processes
[2025-06-03 23:24:34] 2025-06-04 06:24:18,906 | INFO     | will attempt to kill all subprocesses of pid=4179445
[2025-06-03 23:24:34] 2025-06-04 06:24:19,170 | INFO     | process IDs to be killed: [4179445] (in reverse order)
[2025-06-03 23:24:34] 2025-06-04 06:24:19,274 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:24:34] 2025-06-04 06:24:19,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:24:34] 2025-06-04 06:24:19,289 | INFO     | did not find any defunct processes belonging to 4179445
[2025-06-03 23:24:34] 2025-06-04 06:24:19,308 | INFO     | did not find any defunct processes belonging to 4179445
[2025-06-03 23:24:34] 2025-06-04 06:24:19,308 | INFO     | ready for new job
[2025-06-03 23:24:34] 2025-06-04 06:24:19,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:24:34] 2025-06-04 06:24:19,309 | INFO     | **************************************
[2025-06-03 23:24:34] 2025-06-04 06:24:19,309 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:24:34] 2025-06-04 06:24:19,309 | INFO     | **************************************
[2025-06-03 23:24:34] 2025-06-04 06:24:19,309 | INFO     | 
[2025-06-03 23:24:34] 2025-06-04 06:24:19,311 | INFO     | architecture information:
[2025-06-03 23:24:34] 2025-06-04 06:24:19,312 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:24:34] 2025-06-04 06:24:19,374 | INFO     | cat /etc/os-release:
[2025-06-03 23:24:34] NAME="CentOS Linux"
[2025-06-03 23:24:34] VERSION="7 (Core)"
[2025-06-03 23:24:34] ID="centos"
[2025-06-03 23:24:34] ID_LIKE="rhel fedora"
[2025-06-03 23:24:34] VERSION_ID="7"
[2025-06-03 23:24:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:24:34] ANSI_COLOR="0;31"
[2025-06-03 23:24:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:24:34] HOME_URL="https://www.centos.org/"
[2025-06-03 23:24:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:24:34] 
[2025-06-03 23:24:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:24:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:24:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:24:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:24:34] 
[2025-06-03 23:24:34] 2025-06-04 06:24:19,374 | INFO     | **************************************
[2025-06-03 23:24:34] 2025-06-04 06:24:19,878 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 23:24:34] 2025-06-04 06:24:19,916 | INFO     | sufficient remaining disk space (1056607043584 B)
[2025-06-03 23:24:34] 2025-06-04 06:24:19,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:24:34] 2025-06-04 06:24:19,916 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:24:34] 2025-06-04 06:24:19,916 | INFO     | update_server=False
[2025-06-03 23:24:34] 2025-06-04 06:24:19,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:24:34] 2025-06-04 06:24:20,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:24:34] 2025-06-04 06:24:20,292 | INFO     | all data control threads have been joined
[2025-06-03 23:24:34] 2025-06-04 06:24:20,333 | INFO     | all payload control threads have been joined
[2025-06-03 23:24:34] 2025-06-04 06:24:20,359 | INFO     | all job control threads have been joined
[2025-06-03 23:24:34] 2025-06-04 06:24:20,477 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:24:34] 2025-06-04 06:24:20,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:24:34] 2025-06-04 06:24:20,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:24:34] 2025-06-04 06:24:20,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:24:34] 2025-06-04 06:24:20,603 | INFO     | aborting loop
[2025-06-03 23:24:34] 2025-06-04 06:24:20,923 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,023 | INFO     | [job] validate thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,097 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,131 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,160 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,271 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,298 | INFO     | [data] control thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,339 | INFO     | [payload] control thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,365 | INFO     | [job] control thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,459 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,608 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:21,908 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:22,109 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:22,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:22,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:24:34] 2025-06-04 06:24:22,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:24:34] 2025-06-04 06:24:23,896 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:26,975 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:24:34] 2025-06-04 06:24:28,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463054894912)>', '<ExcThread(monitor, started 140462509766400)>']
[2025-06-03 23:24:34] 2025-06-04 06:24:29,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:24:34] 2025-06-04 06:24:29,531 | INFO     | [monitor] control thread has ended
[2025-06-03 23:24:34] 2025-06-04 06:24:33,774 | INFO     | all workflow threads have been joined
[2025-06-03 23:24:34] 2025-06-04 06:24:33,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:24:34] 2025-06-04 06:24:33,775 | INFO     | traces error code: 0
[2025-06-03 23:24:34] 2025-06-04 06:24:33,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:24:34] 2025-06-04 06:24:33,961 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:24:34] 2025-06-04 06:24:33,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:24:34] 2025-06-04 06:24:33,978 [wrapper] pilotpid: 4171178
[2025-06-03 23:24:34] 2025-06-04 06:24:34,003 [wrapper] Pilot exit status: 0
[2025-06-03 23:24:34] 2025-06-04 06:24:34,042 [wrapper] pandaids: 6678287208
[2025-06-03 23:24:34] 2025-06-04 06:24:34,130 [wrapper] cleanup supervisor_pilot 4171184 4171179
[2025-06-03 23:24:34] 2025-06-04 06:24:34,148 [wrapper] Test setup, not cleaning
[2025-06-03 23:24:34] 2025-06-04 06:24:34,154 [wrapper] apfmon messages muted
[2025-06-03 23:24:34] 2025-06-04 06:24:34,156 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:24:34] 2025-06-04 06:24:34,158 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:24:34]  *** Error codes and diagnostics ***
[2025-06-03 23:24:34]     "exeErrorCode": 65,
[2025-06-03 23:24:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 23:24:34]     "pilotErrorCode": 1305,
[2025-06-03 23:24:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 23:24:34]  *** Listing of results directory ***
[2025-06-03 23:24:34] total 214640
[2025-06-03 23:24:34] -rwx------. 1 boinc boinc     37140 Jun  3 21:04 runpilot2-wrapper.sh
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:04 queuedata.json
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:04 pilot3.tar.gz
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:24:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:20 run_atlas
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:20 job.xml
[2025-06-03 23:24:34] -rw-r--r--. 2 boinc boinc 215764720 Jun  3 23:20 EVNT.45006593._002078.pool.root.1
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc      6602 Jun  3 23:20 init_data.xml
[2025-06-03 23:24:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:20 start_atlas.sh
[2025-06-03 23:24:34] drwxrwx--x. 2 boinc boinc      4096 Jun  3 23:20 shared
[2025-06-03 23:24:34] -rw-r--r--. 2 boinc boinc    508870 Jun  3 23:20 input.tar.gz
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:20 boinc_lockfile
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc      2522 Jun  3 23:20 pandaJob.out
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc    986745 Jun  3 23:21 agis_schedconf.cvmfs.json
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc   1603667 Jun  3 23:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:24:34] drwx------. 4 boinc boinc      4096 Jun  3 23:21 pilot3
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc       522 Jun  3 23:21 boinc_task_state.xml
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc       983 Jun  3 23:22 memory_monitor_summary.json
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc     20626 Jun  3 23:22 log.45006595._051855.job.log.tgz.1
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc        95 Jun  3 23:24 pilot_heartbeat.json
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc      8348 Jun  3 23:24 heartbeat.json
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc      4352 Jun  3 23:24 pilotlog.txt
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:24 boinc_mmap_file
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc     74520 Jun  3 23:24 log.45006595._051855.job.log.1
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc       188 Jun  3 23:24 output.list
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc        22 Jun  3 23:24 wrapper_checkpoint.txt
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc       620 Jun  3 23:24 runtime_log
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc    112640 Jun  3 23:24 result.tar.gz
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc      8484 Jun  3 23:24 runtime_log.err
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc       646 Jun  3 23:24 0fNMDmcXug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr5mKDmTnzUbm.diag
[2025-06-03 23:24:34] -rw-r--r--. 1 boinc boinc     21474 Jun  3 23:24 stderr.txt
[2025-06-03 23:24:34] No HITS result produced
[2025-06-03 23:24:34]  *** Contents of shared directory: ***
[2025-06-03 23:24:34] total 211340
[2025-06-03 23:24:34] -rw-r--r--. 2 boinc boinc 215764720 Jun  3 23:20 ATLAS.root_0
[2025-06-03 23:24:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:20 start_atlas.sh
[2025-06-03 23:24:34] -rw-r--r--. 2 boinc boinc    508870 Jun  3 23:20 input.tar.gz
[2025-06-03 23:24:34] -rw-------. 1 boinc boinc    112640 Jun  3 23:24 result.tar.gz
23:24:36 (4166236): run_atlas exited; CPU time 23.523948
23:24:36 (4166236): called boinc_finish(0)

</stderr_txt>
]]>

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