Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:13:12 (2383678): wrapper (7.7.26015): starting
06:13:12 (2383678): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 06:13:12] Arguments: --nthreads 4
[2025-06-06 06:13:12] Threads: 4
[2025-06-06 06:13:12] Checking for CVMFS
[2025-06-06 06:13:12] No cvmfs_config command found, will try listing directly
[2025-06-06 06:13:12] CVMFS is ok
[2025-06-06 06:13:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:13:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:13:12] Further information can be found at the LHC@home message board.
[2025-06-06 06:13:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:13:12] Checking for apptainer binary...
[2025-06-06 06:13:12] which: no apptainer in ((null))
[2025-06-06 06:13:12] apptainer is not installed, using version from CVMFS
[2025-06-06 06:13:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:13:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-06 06:13:12] apptainer works
[2025-06-06 06:13:12] Set ATHENA_PROC_NUMBER=4
[2025-06-06 06:13:12] Set ATHENA_CORE_NUMBER=4
[2025-06-06 06:13:12] Starting ATLAS job with PandaID=6678075658
[2025-06-06 06:13:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:36:48]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:36:48] 2025-06-06 05:33:31,368 | INFO     | transferring file log.45006595._046265.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/log.45006595._046265.job.log.tgz.1 to /scratch/b
[2025-06-06 07:36:48] 2025-06-06 05:33:31,368 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/log.45006595._046265.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2025-06-06 07:36:48] 2025-06-06 05:33:31,388 | INFO     | adding to output.list: log.45006595._046265.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/d3/log.45006595._046265.job.log.tg
[2025-06-06 07:36:48] 2025-06-06 05:33:31,389 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 07:36:48] 2025-06-06 05:33:31,389 | INFO     | summary of transferred files:
[2025-06-06 07:36:48] 2025-06-06 05:33:31,389 | INFO     |  -- lfn=log.45006595._046265.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 07:36:48] 2025-06-06 05:33:31,389 | INFO     | stage-out finished correctly
[2025-06-06 07:36:48] 2025-06-06 05:33:32,112 | WARNING  | process 2395926 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 07:36:48] 2025-06-06 05:33:32,112 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,112 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,113 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2078391 B
[2025-06-06 07:36:48] 2025-06-06 05:33:32,113 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15807 B
[2025-06-06 07:36:48] 2025-06-06 05:33:32,113 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-06 07:36:48] 2025-06-06 05:33:32,131 | INFO     | sufficient remaining disk space (3317042249728 B)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,132 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,132 | INFO     | size of work directory /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658: 2377813 B (within 2537553920 B limit)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,133 | INFO     | pfn file=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/HITS.45006595._046265.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,133 | INFO     | total size of present files: 0 B (workdir size: 2377813 B)
[2025-06-06 07:36:48] 2025-06-06 05:33:32,133 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/HITS.45006595._046265.pool.root.1 since it does not exist
[2025-06-06 07:36:48] 2025-06-06 05:33:32,483 | INFO     | number of running child processes to parent process 2395926: 1
[2025-06-06 07:36:48] 2025-06-06 05:33:32,483 | INFO     | maximum number of monitored processes: 6
[2025-06-06 07:36:48] 2025-06-06 05:33:33,311 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 07:36:48] 2025-06-06 05:33:34,603 | INFO     | job 6678075658 has state=finished
[2025-06-06 07:36:48] 2025-06-06 05:33:34,603 | INFO     | preparing for final server update for job 6678075658 in state='finished'
[2025-06-06 07:36:48] 2025-06-06 05:33:34,603 | INFO     | this job has now completed (state=finished)
[2025-06-06 07:36:48] 2025-06-06 05:33:34,603 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 07:36:48] 2025-06-06 05:33:34,603 | INFO     | log transfer has been attempted: DONE
[2025-06-06 07:36:48] 2025-06-06 05:33:34,604 | INFO     | job 6678075658 has finished - writing final server update
[2025-06-06 07:36:48] 2025-06-06 05:33:34,604 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_650469/.job.ad'
[2025-06-06 07:36:48] 2025-06-06 05:33:34,604 | INFO     | total number of processed events: 400 (read)
[2025-06-06 07:36:48] 2025-06-06 05:33:34,609 | INFO     | executing command: lscpu
[2025-06-06 07:36:48] 2025-06-06 05:33:34,682 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:36:48] 2025-06-06 05:33:34,986 | INFO     | monitor loop #352: job 0:6678075658 is in state 'finished'
[2025-06-06 07:36:48] 2025-06-06 05:33:34,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:36:48] 2025-06-06 05:33:37,490 | INFO     | monitor loop #353: job 0:6678075658 is in state 'finished'
[2025-06-06 07:36:48] 2025-06-06 05:33:37,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:36:48] 2025-06-06 05:33:38,985 | INFO     | 4818s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 07:36:48] 2025-06-06 05:33:39,863 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 07:36:48] 2025-06-06 05:33:39,864 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6678075658/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:36:48] 2025-06-06 05:33:39,864 | INFO     | extracted standard info from prmon json
[2025-06-06 07:36:48] 2025-06-06 05:33:39,864 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:36:48] 2025-06-06 05:33:39,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:36:48] 2025-06-06 05:33:39,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:36:48] 2025-06-06 05:33:39,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:36:48] 2025-06-06 05:33:39,867 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:36:48] 2025-06-06 05:33:39,867 | INFO     | sum of square deviations: 115715658.0
[2025-06-06 07:36:48] 2025-06-06 05:33:39,867 | INFO     | sum of deviations: -11097465595.5
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | mean x: 1749185699.5
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | mean y: 2510755.5694444445
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | -- intersect: 167754468060.62018
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | intersect: 167754468060.62018
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | chi2: 0.019421928494741524
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | -- intersect: 167754468060.62018
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | current memory leak: -95.90 B/s (using 72 data points, chi2=0.02)
[2025-06-06 07:36:48] 2025-06-06 05:33:39,868 | INFO     | ..............................
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . Timing measurements:
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . get job = 0 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . initial setup = 1 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . payload setup = 7 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . stage-in = 0 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . payload execution = 4782 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . stage-out = 0 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | . log creation = 0 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,869 | INFO     | ..............................
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | 
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | job summary report
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | --------------------------------------------------
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | PanDA job id: 6678075658
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | task id: 45006595
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | errors: (none)
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | pilot state: finished 
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | transexitcode: 0
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | exeerrorcode: 0
[2025-06-06 07:36:48] 2025-06-06 05:33:39,927 | INFO     | exeerrordiag: 
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | exitcode: 0
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | exitmsg: OK
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | cpuconsumptiontime: 18305 s
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | nevents: 400
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | neventsw: 0
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | pid: 2395926
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | pgrp: 2395926
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | corecount: 4
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | event service: False
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | sizes: {0: 2397353, 5: 2397559, 11: 2397615, 4793: 2423777, 4795: 2432740, 4797: 2432824, 4803: 2433122}
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | --------------------------------------------------
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | 
[2025-06-06 07:36:48] 2025-06-06 05:33:39,928 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-06-06 07:36:48] 2025-06-06 05:33:39,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:36:48] 2025-06-06 05:33:39,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:36:48] 2025-06-06 05:33:39,952 | INFO     | job 6678075658 has completed (purged errors)
[2025-06-06 07:36:48] 2025-06-06 05:33:39,952 | INFO     | overall cleanup function is called
[2025-06-06 07:36:48] 2025-06-06 05:33:40,960 | INFO     | --- collectZombieJob: --- 10, [2395926]
[2025-06-06 07:36:48] 2025-06-06 05:33:40,961 | INFO     | zombie collector waiting for pid 2395926
[2025-06-06 07:36:48] 2025-06-06 05:33:40,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:36:48] 2025-06-06 05:33:40,961 | INFO     | collected zombie processes
[2025-06-06 07:36:48] 2025-06-06 05:33:40,961 | INFO     | will attempt to kill all subprocesses of pid=2395926
[2025-06-06 07:36:48] 2025-06-06 05:33:41,304 | INFO     | process IDs to be killed: [2395926] (in reverse order)
[2025-06-06 07:36:48] 2025-06-06 05:33:41,430 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:36:48] 2025-06-06 05:33:41,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:36:48] 2025-06-06 05:33:41,451 | INFO     | did not find any defunct processes belonging to 2395926
[2025-06-06 07:36:48] 2025-06-06 05:33:41,471 | INFO     | did not find any defunct processes belonging to 2395926
[2025-06-06 07:36:48] 2025-06-06 05:33:41,472 | INFO     | ready for new job
[2025-06-06 07:36:48] 2025-06-06 05:33:41,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:36:48] 2025-06-06 05:33:41,473 | INFO     | **************************************
[2025-06-06 07:36:48] 2025-06-06 05:33:41,473 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:36:48] 2025-06-06 05:33:41,473 | INFO     | **************************************
[2025-06-06 07:36:48] 2025-06-06 05:33:41,474 | INFO     | 
[2025-06-06 07:36:48] 2025-06-06 05:33:41,480 | INFO     | architecture information:
[2025-06-06 07:36:48] 2025-06-06 05:33:41,480 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:36:48] 2025-06-06 05:33:41,499 | INFO     | cat /etc/os-release:
[2025-06-06 07:36:48] NAME="CentOS Linux"
[2025-06-06 07:36:48] VERSION="7 (Core)"
[2025-06-06 07:36:48] ID="centos"
[2025-06-06 07:36:48] ID_LIKE="rhel fedora"
[2025-06-06 07:36:48] VERSION_ID="7"
[2025-06-06 07:36:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:36:48] ANSI_COLOR="0;31"
[2025-06-06 07:36:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:36:48] HOME_URL="https://www.centos.org/"
[2025-06-06 07:36:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:36:48] 
[2025-06-06 07:36:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:36:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:36:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:36:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:36:48] 
[2025-06-06 07:36:48] 2025-06-06 05:33:41,499 | INFO     | **************************************
[2025-06-06 07:36:48] 2025-06-06 05:33:42,002 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-06 07:36:48] 2025-06-06 05:33:42,021 | INFO     | sufficient remaining disk space (3317038055424 B)
[2025-06-06 07:36:48] 2025-06-06 05:33:42,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:36:48] 2025-06-06 05:33:42,022 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:36:48] 2025-06-06 05:33:42,022 | INFO     | update_server=False
[2025-06-06 07:36:48] 2025-06-06 05:33:42,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:36:48] 2025-06-06 05:33:42,022 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 07:36:48] 2025-06-06 05:33:42,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:36:48] 2025-06-06 05:33:42,023 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:36:48] 2025-06-06 05:33:42,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:36:48] 2025-06-06 05:33:42,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:36:48] 2025-06-06 05:33:42,045 | INFO     | all job control threads have been joined
[2025-06-06 07:36:48] 2025-06-06 05:33:42,319 | INFO     | all data control threads have been joined
[2025-06-06 07:36:48] 2025-06-06 05:33:42,502 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 07:36:48] 2025-06-06 05:33:42,502 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 07:36:48] 2025-06-06 05:33:42,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:36:48] 2025-06-06 05:33:42,502 | INFO     | will abort loop
[2025-06-06 07:36:48] 2025-06-06 05:33:42,562 | INFO     | all payload control threads have been joined
[2025-06-06 07:36:48] 2025-06-06 05:33:43,027 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,050 | INFO     | [job] control thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,325 | INFO     | [data] control thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,397 | INFO     | [job] validate thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,508 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,567 | INFO     | [payload] control thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,620 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,650 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,755 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,858 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:43,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:36:48] 2025-06-06 05:33:44,029 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:44,473 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:44,507 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:44,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:36:48] 2025-06-06 05:33:45,943 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:47,887 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:52,087 | INFO     | job.realtimelogging is not enabled
[2025-06-06 07:36:48] 2025-06-06 05:33:53,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:36:48] 2025-06-06 05:33:54,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23244377315136)>', '<ExcThread(monitor, started 23244140676864)>']
[2025-06-06 07:36:48] 2025-06-06 05:33:55,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:36:48] 2025-06-06 05:33:55,083 | INFO     | [monitor] control thread has ended
[2025-06-06 07:36:48] 2025-06-06 05:33:59,667 | INFO     | all workflow threads have been joined
[2025-06-06 07:36:48] 2025-06-06 05:33:59,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:36:48] 2025-06-06 05:33:59,667 | INFO     | traces error code: 0
[2025-06-06 07:36:48] 2025-06-06 05:33:59,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:36:48] 2025-06-06 05:33:59,792 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:36:48] 2025-06-06 05:33:59,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:36:48] 2025-06-06 05:33:59,798 [wrapper] pilotpid: 2387775
[2025-06-06 07:36:48] 2025-06-06 05:33:59,800 [wrapper] Pilot exit status: 0
[2025-06-06 07:36:48] 2025-06-06 05:33:59,810 [wrapper] pandaids: 6678075658
[2025-06-06 07:36:48] 2025-06-06 05:33:59,897 [wrapper] cleanup supervisor_pilot 2582118 2387776
[2025-06-06 07:36:48] 2025-06-06 05:33:59,900 [wrapper] Test setup, not cleaning
[2025-06-06 07:36:48] 2025-06-06 05:33:59,903 [wrapper] apfmon messages muted
[2025-06-06 07:36:48] 2025-06-06 05:33:59,905 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:36:48] 2025-06-06 05:33:59,907 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:36:48]  *** Error codes and diagnostics ***
[2025-06-06 07:36:48]     "exeErrorCode": 0,
[2025-06-06 07:36:48]     "exeErrorDiag": "",
[2025-06-06 07:36:48]     "pilotErrorCode": 0,
[2025-06-06 07:36:48]     "pilotErrorDiag": "",
[2025-06-06 07:36:48]  *** Listing of results directory ***
[2025-06-06 07:36:48] total 389100
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-06 07:36:48] -rwx------ 1 boinc boinc     37140 Jun  3 23:47 runpilot2-wrapper.sh
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:47 queuedata.json
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc       100 Jun  6 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:36:48] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:13 run_atlas
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc       105 Jun  6 06:13 job.xml
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc      6682 Jun  6 06:13 init_data.xml
[2025-06-06 07:36:48] -rw-r--r-- 2 boinc boinc 216723691 Jun  6 06:13 EVNT.45006593._001856.pool.root.1
[2025-06-06 07:36:48] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:13 start_atlas.sh
[2025-06-06 07:36:48] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:13 shared
[2025-06-06 07:36:48] -rw-r--r-- 2 boinc boinc    508878 Jun  6 06:13 input.tar.gz
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc         0 Jun  6 06:13 boinc_lockfile
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc      2525 Jun  6 06:13 pandaJob.out
[2025-06-06 07:36:48] -rw------- 1 boinc boinc    988125 Jun  6 06:13 agis_schedconf.cvmfs.json
[2025-06-06 07:36:48] -rw------- 1 boinc boinc   1598969 Jun  6 06:13 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:36:48] drwx------ 4 boinc boinc      4096 Jun  6 06:13 pilot3
[2025-06-06 07:36:48] -rw------- 1 boinc boinc        95 Jun  6 07:32 pilot_heartbeat.json
[2025-06-06 07:36:48] -rw------- 1 boinc boinc 176452037 Jun  6 07:33 HITS.45006595._046265.pool.root.1
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc       529 Jun  6 07:33 boinc_task_state.xml
[2025-06-06 07:36:48] -rw------- 1 boinc boinc      1025 Jun  6 07:33 memory_monitor_summary.json
[2025-06-06 07:36:48] -rw------- 1 boinc boinc    236170 Jun  6 07:33 log.45006595._046265.job.log.tgz.1
[2025-06-06 07:36:48] -rw------- 1 boinc boinc      7699 Jun  6 07:33 heartbeat.json
[2025-06-06 07:36:48] -rw------- 1 boinc boinc      4745 Jun  6 07:33 pilotlog.txt
[2025-06-06 07:36:48] -rw------- 1 boinc boinc    473896 Jun  6 07:33 log.45006595._046265.job.log.1
[2025-06-06 07:36:48] -rw------- 1 boinc boinc       357 Jun  6 07:33 output.list
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc       620 Jun  6 07:33 runtime_log
[2025-06-06 07:36:48] -rw------- 1 boinc boinc    727040 Jun  6 07:33 result.tar.gz
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc      9025 Jun  6 07:33 runtime_log.err
[2025-06-06 07:36:48] -rw------- 1 boinc boinc       661 Jun  6 07:33 HlINDm7eog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS2ZKDmOdMt5n.diag
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc        26 Jun  6 07:36 wrapper_checkpoint.txt
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc      8192 Jun  6 07:36 boinc_mmap_file
[2025-06-06 07:36:48] -rw-r--r-- 1 boinc boinc     22586 Jun  6 07:36 stderr.txt
[2025-06-06 07:36:48] HITS file was successfully produced:
[2025-06-06 07:36:48] -rw------- 1 boinc boinc 176452037 Jun  6 07:33 shared/HITS.pool.root.1
[2025-06-06 07:36:48]  *** Contents of shared directory: ***
[2025-06-06 07:36:48] total 385204
[2025-06-06 07:36:48] -rw-r--r-- 2 boinc boinc 216723691 Jun  6 06:13 ATLAS.root_0
[2025-06-06 07:36:48] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:13 start_atlas.sh
[2025-06-06 07:36:48] -rw-r--r-- 2 boinc boinc    508878 Jun  6 06:13 input.tar.gz
[2025-06-06 07:36:48] -rw------- 1 boinc boinc 176452037 Jun  6 07:33 HITS.pool.root.1
[2025-06-06 07:36:48] -rw------- 1 boinc boinc    727040 Jun  6 07:33 result.tar.gz
07:36:50 (2383678): run_atlas exited; CPU time 18456.297100
07:36:50 (2383678): called boinc_finish(0)

</stderr_txt>
]]>

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