Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:56:44 (1151049): wrapper (7.7.26015): starting
18:56:44 (1151049): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 18:56:45] Arguments: --nthreads 4
[2025-06-05 18:56:45] Threads: 4
[2025-06-05 18:56:45] Checking for CVMFS
[2025-06-05 18:56:45] No cvmfs_config command found, will try listing directly
[2025-06-05 18:56:45] CVMFS is ok
[2025-06-05 18:56:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 18:56:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 18:56:45] Further information can be found at the LHC@home message board.
[2025-06-05 18:56:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:56:45] Checking for apptainer binary...
[2025-06-05 18:56:45] which: no apptainer in ((null))
[2025-06-05 18:56:45] apptainer is not installed, using version from CVMFS
[2025-06-05 18:56:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:56:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 18:56:45] apptainer works
[2025-06-05 18:56:45] Set ATHENA_PROC_NUMBER=4
[2025-06-05 18:56:45] Set ATHENA_CORE_NUMBER=4
[2025-06-05 18:56:45] Starting ATLAS job with PandaID=6678245588
[2025-06-05 18:56:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:12:48]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:12:48] 2025-06-05 19:12:20,585 | INFO     | executing command: lscpu
[2025-06-05 21:12:48] 2025-06-05 19:12:20,692 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 21:12:48] 2025-06-05 19:12:22,574 | INFO     | monitor loop #568: job 0:6678245588 is in state 'finished'
[2025-06-05 21:12:48] 2025-06-05 19:12:22,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:12:48] 2025-06-05 19:12:25,077 | INFO     | monitor loop #569: job 0:6678245588 is in state 'finished'
[2025-06-05 21:12:48] 2025-06-05 19:12:25,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,706 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 21:12:48] 2025-06-05 19:12:26,706 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6678245588/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,707 | INFO     | extracted standard info from prmon json
[2025-06-05 21:12:48] 2025-06-05 19:12:26,707 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:12:48] 2025-06-05 19:12:26,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:12:48] 2025-06-05 19:12:26,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:12:48] 2025-06-05 19:12:26,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:12:48] 2025-06-05 19:12:26,710 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:12:48] 2025-06-05 19:12:26,711 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,711 | INFO     | sum of deviations: 19729341752.000004
[2025-06-05 21:12:48] 2025-06-05 19:12:26,712 | INFO     | mean x: 1749146677.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,712 | INFO     | mean y: 2288165.92481203
[2025-06-05 21:12:48] 2025-06-05 19:12:26,712 | INFO     | -- intersect: -47305215376.62674
[2025-06-05 21:12:48] 2025-06-05 19:12:26,712 | INFO     | intersect: -47305215376.62674
[2025-06-05 21:12:48] 2025-06-05 19:12:26,712 | INFO     | chi2: 1.6851780600036068
[2025-06-05 21:12:48] 2025-06-05 19:12:26,712 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,713 | INFO     | sum of deviations: 18941388922.5
[2025-06-05 21:12:48] 2025-06-05 19:12:26,713 | INFO     | mean x: 1749146524.5
[2025-06-05 21:12:48] 2025-06-05 19:12:26,713 | INFO     | mean y: 2286649.0234375
[2025-06-05 21:12:48] 2025-06-05 19:12:26,714 | INFO     | -- intersect: -50949121144.14503
[2025-06-05 21:12:48] 2025-06-05 19:12:26,714 | INFO     | intersect: -50949121144.14503
[2025-06-05 21:12:48] 2025-06-05 19:12:26,714 | INFO     | chi2: 1.6875677578314483
[2025-06-05 21:12:48] 2025-06-05 19:12:26,714 | INFO     | current chi2=1.6875677578314483 (change=-0.14180684430678922 %)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,714 | INFO     | right removable region: 127
[2025-06-05 21:12:48] 2025-06-05 19:12:26,714 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,715 | INFO     | sum of deviations: -1229491264.5
[2025-06-05 21:12:48] 2025-06-05 19:12:26,715 | INFO     | mean x: 1749146829.5
[2025-06-05 21:12:48] 2025-06-05 19:12:26,715 | INFO     | mean y: 2327884.2421875
[2025-06-05 21:12:48] 2025-06-05 19:12:26,715 | INFO     | -- intersect: 3309599699.172295
[2025-06-05 21:12:48] 2025-06-05 19:12:26,716 | INFO     | intersect: 3309599699.172295
[2025-06-05 21:12:48] 2025-06-05 19:12:26,716 | INFO     | chi2: 0.013258617703574343
[2025-06-05 21:12:48] 2025-06-05 19:12:26,716 | INFO     | current chi2=0.013258617703574343 (change=99.21322155692283 %)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,716 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | sum of deviations: -911332740.9999996
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | mean x: 1749146982.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | mean y: 2327180.8211382115
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | -- intersect: 2765055803.0252585
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | intersect: 2765055803.0252585
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | chi2: 0.010327146321294245
[2025-06-05 21:12:48] 2025-06-05 19:12:26,717 | INFO     | current chi2=0.010327146321294245 (change=22.109932180108135 %)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,718 | INFO     | left removable region: 20
[2025-06-05 21:12:48] 2025-06-05 19:12:26,718 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,718 | INFO     | sum of deviations: 1148184578.0000002
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | mean x: 1749147104.0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | mean y: 2321927.785046729
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | -- intersect: -5285127447.341882
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | intersect: -5285127447.341882
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | chi2: 0.0002801881958567335
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | -- intersect: -5285127447.341882
[2025-06-05 21:12:48] 2025-06-05 19:12:26,719 | INFO     | current memory leak: 3.02 B/s (using 107 data points, chi2=0.00)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | ..............................
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . Timing measurements:
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . get job = 0 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . initial setup = 1 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . payload setup = 9 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . stage-in = 0 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . payload execution = 8088 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . stage-out = 0 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | . log creation = 0 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,720 | INFO     | ..............................
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | 
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | job summary report
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | --------------------------------------------------
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | PanDA job id: 6678245588
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | task id: 45006595
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | errors: (none)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | pilot state: finished 
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | transexitcode: 0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | exeerrorcode: 0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | exeerrordiag: 
[2025-06-05 21:12:48] 2025-06-05 19:12:26,826 | INFO     | exitcode: 0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | exitmsg: OK
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | cpuconsumptiontime: 30564 s
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | nevents: 400
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | neventsw: 0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | pid: 1162572
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | pgrp: 1162572
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | corecount: 4
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | event service: False
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | sizes: {0: 2397354, 7: 2397560, 11: 2397588, 8101: 2425415, 8103: 2434380, 8106: 2434436, 8112: 2434734}
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | --------------------------------------------------
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | 
[2025-06-05 21:12:48] 2025-06-05 19:12:26,827 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-06-05 21:12:48] 2025-06-05 19:12:26,858 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,859 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,859 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,859 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,859 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:12:48] 2025-06-05 19:12:26,862 | INFO     | job 6678245588 has completed (purged errors)
[2025-06-05 21:12:48] 2025-06-05 19:12:26,862 | INFO     | overall cleanup function is called
[2025-06-05 21:12:48] 2025-06-05 19:12:27,872 | INFO     | --- collectZombieJob: --- 10, [1162572]
[2025-06-05 21:12:48] 2025-06-05 19:12:27,872 | INFO     | zombie collector waiting for pid 1162572
[2025-06-05 21:12:48] 2025-06-05 19:12:27,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:12:48] 2025-06-05 19:12:27,872 | INFO     | collected zombie processes
[2025-06-05 21:12:48] 2025-06-05 19:12:27,872 | INFO     | will attempt to kill all subprocesses of pid=1162572
[2025-06-05 21:12:48] 2025-06-05 19:12:28,568 | INFO     | process IDs to be killed: [1162572] (in reverse order)
[2025-06-05 21:12:48] 2025-06-05 19:12:28,810 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:12:48] 2025-06-05 19:12:28,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:12:48] 2025-06-05 19:12:28,839 | INFO     | did not find any defunct processes belonging to 1162572
[2025-06-05 21:12:48] 2025-06-05 19:12:28,866 | INFO     | did not find any defunct processes belonging to 1162572
[2025-06-05 21:12:48] 2025-06-05 19:12:28,867 | INFO     | ready for new job
[2025-06-05 21:12:48] 2025-06-05 19:12:28,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:12:48] 2025-06-05 19:12:28,869 | INFO     | **************************************
[2025-06-05 21:12:48] 2025-06-05 19:12:28,869 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:12:48] 2025-06-05 19:12:28,869 | INFO     | **************************************
[2025-06-05 21:12:48] 2025-06-05 19:12:28,869 | INFO     | 
[2025-06-05 21:12:48] 2025-06-05 19:12:28,877 | INFO     | architecture information:
[2025-06-05 21:12:48] 2025-06-05 19:12:28,877 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:12:48] 2025-06-05 19:12:28,900 | INFO     | cat /etc/os-release:
[2025-06-05 21:12:48] NAME="CentOS Linux"
[2025-06-05 21:12:48] VERSION="7 (Core)"
[2025-06-05 21:12:48] ID="centos"
[2025-06-05 21:12:48] ID_LIKE="rhel fedora"
[2025-06-05 21:12:48] VERSION_ID="7"
[2025-06-05 21:12:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:12:48] ANSI_COLOR="0;31"
[2025-06-05 21:12:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:12:48] HOME_URL="https://www.centos.org/"
[2025-06-05 21:12:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:12:48] 
[2025-06-05 21:12:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:12:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:12:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:12:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:12:48] 
[2025-06-05 21:12:48] 2025-06-05 19:12:28,900 | INFO     | **************************************
[2025-06-05 21:12:48] 2025-06-05 19:12:29,403 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-06-05 21:12:48] 2025-06-05 19:12:29,424 | INFO     | sufficient remaining disk space (3293222797312 B)
[2025-06-05 21:12:48] 2025-06-05 19:12:29,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:12:48] 2025-06-05 19:12:29,425 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:12:48] 2025-06-05 19:12:29,425 | INFO     | update_server=False
[2025-06-05 21:12:48] 2025-06-05 19:12:29,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:12:48] 2025-06-05 19:12:29,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:12:48] 2025-06-05 19:12:29,426 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:12:48] 2025-06-05 19:12:29,426 | INFO     | aborting loop
[2025-06-05 21:12:48] 2025-06-05 19:12:29,427 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:12:48] 2025-06-05 19:12:29,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:12:48] 2025-06-05 19:12:29,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:12:48] 2025-06-05 19:12:29,598 | INFO     | all job control threads have been joined
[2025-06-05 21:12:48] 2025-06-05 19:12:29,635 | INFO     | all data control threads have been joined
[2025-06-05 21:12:48] 2025-06-05 19:12:30,117 | INFO     | all payload control threads have been joined
[2025-06-05 21:12:48] 2025-06-05 19:12:30,432 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:30,432 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:30,604 | INFO     | [job] control thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:30,640 | INFO     | [data] control thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:30,666 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:30,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:12:48] 2025-06-05 19:12:30,899 | INFO     | [job] validate thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:12:48] 2025-06-05 19:12:31,122 | INFO     | [payload] control thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,132 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,171 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,275 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,527 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,681 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:31,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:12:48] 2025-06-05 19:12:32,826 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:32,838 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:35,064 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:39,999 | INFO     | job.realtimelogging is not enabled
[2025-06-05 21:12:48] 2025-06-05 19:12:41,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:12:48] 2025-06-05 19:12:43,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22961396340544)>', '<ExcThread(monitor, started 22960953865984)>']
[2025-06-05 21:12:48] 2025-06-05 19:12:43,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:12:48] 2025-06-05 19:12:43,497 | INFO     | [monitor] control thread has ended
[2025-06-05 21:12:48] 2025-06-05 19:12:48,062 | INFO     | all workflow threads have been joined
[2025-06-05 21:12:48] 2025-06-05 19:12:48,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:12:48] 2025-06-05 19:12:48,062 | INFO     | traces error code: 0
[2025-06-05 21:12:48] 2025-06-05 19:12:48,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:12:48] 2025-06-05 19:12:48,198 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:12:48] 2025-06-05 19:12:48,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:12:48] 2025-06-05 19:12:48,205 [wrapper] pilotpid: 1154962
[2025-06-05 21:12:48] 2025-06-05 19:12:48,210 [wrapper] Pilot exit status: 0
[2025-06-05 21:12:48] 2025-06-05 19:12:48,224 [wrapper] pandaids: 6678245588
[2025-06-05 21:12:48] 2025-06-05 19:12:48,375 [wrapper] cleanup supervisor_pilot 1617926 1154963
[2025-06-05 21:12:48] 2025-06-05 19:12:48,379 [wrapper] Test setup, not cleaning
[2025-06-05 21:12:48] 2025-06-05 19:12:48,384 [wrapper] apfmon messages muted
[2025-06-05 21:12:48] 2025-06-05 19:12:48,388 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:12:48] 2025-06-05 19:12:48,392 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:12:48]  *** Error codes and diagnostics ***
[2025-06-05 21:12:48]     "exeErrorCode": 0,
[2025-06-05 21:12:48]     "exeErrorDiag": "",
[2025-06-05 21:12:48]     "pilotErrorCode": 0,
[2025-06-05 21:12:48]     "pilotErrorDiag": "",
[2025-06-05 21:12:48]  *** Listing of results directory ***
[2025-06-05 21:12:48] total 397552
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:11 queuedata.json
[2025-06-05 21:12:48] -rwx------ 1 boinc boinc     37140 Jun  4 03:12 runpilot2-wrapper.sh
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc       100 Jun  5 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:12:48] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 18:56 run_atlas
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc       105 Jun  5 18:56 job.xml
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc      6687 Jun  5 18:56 init_data.xml
[2025-06-05 21:12:48] -rw-r--r-- 2 boinc boinc 216695903 Jun  5 18:56 EVNT.45006593._001996.pool.root.1
[2025-06-05 21:12:48] -rw-r--r-- 2 boinc boinc     15093 Jun  5 18:56 start_atlas.sh
[2025-06-05 21:12:48] drwxrwx--x 2 boinc boinc      4096 Jun  5 18:56 shared
[2025-06-05 21:12:48] -rw-r--r-- 2 boinc boinc    508882 Jun  5 18:56 input.tar.gz
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc         0 Jun  5 18:56 boinc_lockfile
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc      2525 Jun  5 18:56 pandaJob.out
[2025-06-05 21:12:48] -rw------- 1 boinc boinc    983229 Jun  5 18:56 agis_schedconf.cvmfs.json
[2025-06-05 21:12:48] -rw------- 1 boinc boinc   1598969 Jun  5 18:56 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:12:48] drwx------ 4 boinc boinc      4096 Jun  5 18:56 pilot3
[2025-06-05 21:12:48] -rw------- 1 boinc boinc 184470111 Jun  5 21:11 HITS.45006595._049787.pool.root.1
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc       529 Jun  5 21:12 boinc_task_state.xml
[2025-06-05 21:12:48] -rw------- 1 boinc boinc      1028 Jun  5 21:12 memory_monitor_summary.json
[2025-06-05 21:12:48] -rw------- 1 boinc boinc    281065 Jun  5 21:12 log.45006595._049787.job.log.tgz.1
[2025-06-05 21:12:48] -rw------- 1 boinc boinc        95 Jun  5 21:12 pilot_heartbeat.json
[2025-06-05 21:12:48] -rw------- 1 boinc boinc      7694 Jun  5 21:12 heartbeat.json
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc        27 Jun  5 21:12 wrapper_checkpoint.txt
[2025-06-05 21:12:48] -rw------- 1 boinc boinc      4560 Jun  5 21:12 pilotlog.txt
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc      8192 Jun  5 21:12 boinc_mmap_file
[2025-06-05 21:12:48] -rw------- 1 boinc boinc    768496 Jun  5 21:12 log.45006595._049787.job.log.1
[2025-06-05 21:12:48] -rw------- 1 boinc boinc       357 Jun  5 21:12 output.list
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc       620 Jun  5 21:12 runtime_log
[2025-06-05 21:12:48] -rw------- 1 boinc boinc   1064960 Jun  5 21:12 result.tar.gz
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc      9040 Jun  5 21:12 runtime_log.err
[2025-06-05 21:12:48] -rw------- 1 boinc boinc       662 Jun  5 21:12 J4pNDmLrrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKSaKDmbQFuDn.diag
[2025-06-05 21:12:48] -rw-r--r-- 1 boinc boinc     20911 Jun  5 21:12 stderr.txt
[2025-06-05 21:12:48] HITS file was successfully produced:
[2025-06-05 21:12:48] -rw------- 1 boinc boinc 184470111 Jun  5 21:11 shared/HITS.pool.root.1
[2025-06-05 21:12:48]  *** Contents of shared directory: ***
[2025-06-05 21:12:48] total 393332
[2025-06-05 21:12:48] -rw-r--r-- 2 boinc boinc 216695903 Jun  5 18:56 ATLAS.root_0
[2025-06-05 21:12:48] -rw-r--r-- 2 boinc boinc     15093 Jun  5 18:56 start_atlas.sh
[2025-06-05 21:12:48] -rw-r--r-- 2 boinc boinc    508882 Jun  5 18:56 input.tar.gz
[2025-06-05 21:12:48] -rw------- 1 boinc boinc 184470111 Jun  5 21:11 HITS.pool.root.1
[2025-06-05 21:12:48] -rw------- 1 boinc boinc   1064960 Jun  5 21:12 result.tar.gz
21:14:40 (1151049): run_atlas exited; CPU time 30999.689286
21:14:40 (1151049): called boinc_finish(0)

</stderr_txt>
]]>

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