Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:11:23 (1021435): wrapper (7.7.26015): starting
02:11:23 (1021435): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 02:11:23] Arguments: --nthreads 10
[2025-06-04 02:11:23] Threads: 10
[2025-06-04 02:11:23] Checking for CVMFS
[2025-06-04 02:11:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:11:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:11:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:11:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:11:24] 2.12.6.0 6643 960 171440 146770 1 728 26827029 32935936 27792 16776704 0 7866718 99.775 3273239 20921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 02:11:24] CVMFS is ok
[2025-06-04 02:11:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:11:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:11:24] Further information can be found at the LHC@home message board.
[2025-06-04 02:11:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:11:24] Checking for apptainer binary...
[2025-06-04 02:11:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:11:24] Running /usr/bin/apptainer --version
[2025-06-04 02:11:24] apptainer version 1.4.1-1.el9
[2025-06-04 02:11:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:11:24] c-3-40.aglt2.org
[2025-06-04 02:11:24] apptainer works
[2025-06-04 02:11:24] Set ATHENA_PROC_NUMBER=10
[2025-06-04 02:11:24] Set ATHENA_CORE_NUMBER=10
[2025-06-04 02:11:24] Starting ATLAS job with PandaID=6678245586
[2025-06-04 02:11:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:14:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:14:44] 2025-06-04 12:14:30,242 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678245586/HITS.45006595._049785.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,242 | INFO     | total size of present files: 0 B (workdir size: 4300858 B)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,242 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678245586/HITS.45006595._049785.pool.root.1 since it does not exist
[2025-06-04 08:14:44] 2025-06-04 12:14:30,255 | INFO     | sum of deviations: 161372496033.3636
[2025-06-04 08:14:44] 2025-06-04 12:14:30,255 | INFO     | mean x: 1749028233.590909
[2025-06-04 08:14:44] 2025-06-04 12:14:30,255 | INFO     | mean y: 2175409.9886363638
[2025-06-04 08:14:44] 2025-06-04 12:14:30,255 | INFO     | -- intersect: -20867888499.37889
[2025-06-04 08:14:44] 2025-06-04 12:14:30,255 | INFO     | intersect: -20867888499.37889
[2025-06-04 08:14:44] 2025-06-04 12:14:30,256 | INFO     | chi2: 4.454098294844901
[2025-06-04 08:14:44] 2025-06-04 12:14:30,256 | INFO     | current chi2=4.454098294844901 (change=14.873195695361158 %)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,261 | INFO     | right removable region: 351
[2025-06-04 08:14:44] 2025-06-04 12:14:30,261 | INFO     | sum of square deviations: 13523899377.090881
[2025-06-04 08:14:44] 2025-06-04 12:14:30,266 | INFO     | sum of deviations: 69248518677.63641
[2025-06-04 08:14:44] 2025-06-04 12:14:30,267 | INFO     | mean x: 1749028538.590909
[2025-06-04 08:14:44] 2025-06-04 12:14:30,267 | INFO     | mean y: 2189218.8238636362
[2025-06-04 08:14:44] 2025-06-04 12:14:30,267 | INFO     | -- intersect: -8953632770.468786
[2025-06-04 08:14:44] 2025-06-04 12:14:30,267 | INFO     | intersect: -8953632770.468786
[2025-06-04 08:14:44] 2025-06-04 12:14:30,268 | INFO     | chi2: 3.0645793605304616
[2025-06-04 08:14:44] 2025-06-04 12:14:30,268 | INFO     | current chi2=3.0645793605304616 (change=41.42970580558414 %)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,269 | INFO     | sum of square deviations: 12955730127.048925
[2025-06-04 08:14:44] 2025-06-04 12:14:30,285 | INFO     | sum of deviations: 9161631287.582184
[2025-06-04 08:14:44] 2025-06-04 12:14:30,286 | INFO     | mean x: 1749028691.092219
[2025-06-04 08:14:44] 2025-06-04 12:14:30,286 | INFO     | mean y: 2205333.9193083574
[2025-06-04 08:14:44] 2025-06-04 12:14:30,286 | INFO     | -- intersect: -1234618513.2936428
[2025-06-04 08:14:44] 2025-06-04 12:14:30,286 | INFO     | intersect: -1234618513.2936428
[2025-06-04 08:14:44] 2025-06-04 12:14:30,287 | INFO     | chi2: 1.7064245583038482
[2025-06-04 08:14:44] 2025-06-04 12:14:30,287 | INFO     | current chi2=1.7064245583038482 (change=44.31782122266608 %)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,288 | INFO     | sum of square deviations: 12403700714.505823
[2025-06-04 08:14:44] 2025-06-04 12:14:30,291 | INFO     | sum of deviations: -29086279544.061405
[2025-06-04 08:14:44] 2025-06-04 12:14:30,292 | INFO     | mean x: 1749028843.5935671
[2025-06-04 08:14:44] 2025-06-04 12:14:30,292 | INFO     | mean y: 2215881.51754386
[2025-06-04 08:14:44] 2025-06-04 12:14:30,292 | INFO     | -- intersect: 4103632309.2691846
[2025-06-04 08:14:44] 2025-06-04 12:14:30,292 | INFO     | intersect: 4103632309.2691846
[2025-06-04 08:14:44] 2025-06-04 12:14:30,293 | INFO     | chi2: 1.1157746170609637
[2025-06-04 08:14:44] 2025-06-04 12:14:30,293 | INFO     | current chi2=1.1157746170609637 (change=34.6133052509499 %)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,294 | INFO     | sum of square deviations: 11867599194.148392
[2025-06-04 08:14:44] 2025-06-04 12:14:30,297 | INFO     | sum of deviations: -48508143636.74184
[2025-06-04 08:14:44] 2025-06-04 12:14:30,298 | INFO     | mean x: 1749028996.091988
[2025-06-04 08:14:44] 2025-06-04 12:14:30,298 | INFO     | mean y: 2221395.540059347
[2025-06-04 08:14:44] 2025-06-04 12:14:30,298 | INFO     | -- intersect: 7151278958.007287
[2025-06-04 08:14:44] 2025-06-04 12:14:30,298 | INFO     | intersect: 7151278958.007287
[2025-06-04 08:14:44] 2025-06-04 12:14:30,299 | INFO     | chi2: 0.9399795680013285
[2025-06-04 08:14:44] 2025-06-04 12:14:30,299 | INFO     | current chi2=0.9399795680013285 (change=15.755426442904112 %)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,299 | INFO     | left removable region: 40
[2025-06-04 08:14:44] 2025-06-04 12:14:30,300 | INFO     | sum of square deviations: 9327256266.2958
[2025-06-04 08:14:44] 2025-06-04 12:14:30,303 | INFO     | sum of deviations: -21601644934.131836
[2025-06-04 08:14:44] 2025-06-04 12:14:30,303 | INFO     | mean x: 1749029423.0932477
[2025-06-04 08:14:44] 2025-06-04 12:14:30,303 | INFO     | mean y: 2225587.5562700965
[2025-06-04 08:14:44] 2025-06-04 12:14:30,303 | INFO     | -- intersect: 4052925117.871029
[2025-06-04 08:14:44] 2025-06-04 12:14:30,304 | INFO     | intersect: 4052925117.871029
[2025-06-04 08:14:44] 2025-06-04 12:14:30,304 | INFO     | chi2: 0.12764130611272842
[2025-06-04 08:14:44] 2025-06-04 12:14:30,305 | INFO     | -- intersect: 4052925117.871029
[2025-06-04 08:14:44] 2025-06-04 12:14:30,305 | INFO     | current memory leak: -2.32 B/s (using 311 data points, chi2=0.13)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,306 | INFO     | ..............................
[2025-06-04 08:14:44] 2025-06-04 12:14:30,306 | INFO     | . Timing measurements:
[2025-06-04 08:14:44] 2025-06-04 12:14:30,306 | INFO     | . get job = 0 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,306 | INFO     | . initial setup = 2 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,306 | INFO     | . payload setup = 8 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,307 | INFO     | . stage-in = 0 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,307 | INFO     | . payload execution = 21734 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,307 | INFO     | . stage-out = 2 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,307 | INFO     | . log creation = 0 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,307 | INFO     | ..............................
[2025-06-04 08:14:44] 2025-06-04 12:14:30,944 | INFO     | number of running child processes to parent process 1034458: 1
[2025-06-04 08:14:44] 2025-06-04 12:14:30,944 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:14:44] 2025-06-04 12:14:30,944 | INFO     | aborting job monitoring since job object (job id=6678245586) has expired
[2025-06-04 08:14:44] 2025-06-04 12:14:30,969 | INFO     | 
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | job summary report
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | --------------------------------------------------
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | PanDA job id: 6678245586
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | task id: 45006595
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | errors: (none)
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | pilot state: finished 
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | transexitcode: 0
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | exeerrorcode: 0
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | exeerrordiag: 
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | exitcode: 0
[2025-06-04 08:14:44] 2025-06-04 12:14:30,977 | INFO     | exitmsg: OK
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | cpuconsumptiontime: 37971 s
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | nevents: 400
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | neventsw: 0
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | pid: 1034458
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | pgrp: 1034458
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | corecount: 10
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | event service: False
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | sizes: {0: 2404356, 1: 2405212, 6: 2405418, 12: 2405446, 21746: 2438591, 21749: 2448585, 21750: 2448769, 21757: 2448967}
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | --------------------------------------------------
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | 
[2025-06-04 08:14:44] 2025-06-04 12:14:30,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:14:44] 2025-06-04 12:14:31,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:14:44] 2025-06-04 12:14:31,075 | INFO     | job 6678245586 has completed (purged errors)
[2025-06-04 08:14:44] 2025-06-04 12:14:31,075 | INFO     | overall cleanup function is called
[2025-06-04 08:14:44] 2025-06-04 12:14:32,085 | INFO     | --- collectZombieJob: --- 10, [1034458]
[2025-06-04 08:14:44] 2025-06-04 12:14:32,085 | INFO     | zombie collector waiting for pid 1034458
[2025-06-04 08:14:44] 2025-06-04 12:14:32,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:14:44] 2025-06-04 12:14:32,086 | INFO     | collected zombie processes
[2025-06-04 08:14:44] 2025-06-04 12:14:32,086 | INFO     | will attempt to kill all subprocesses of pid=1034458
[2025-06-04 08:14:44] 2025-06-04 12:14:32,663 | INFO     | PID=1026148 has CPU usage=18.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:14:44] 2025-06-04 12:14:32,664 | INFO     | .. there are 47 such processes running
[2025-06-04 08:14:44] 2025-06-04 12:14:32,947 | INFO     | process IDs to be killed: [1034458] (in reverse order)
[2025-06-04 08:14:44] 2025-06-04 12:14:33,092 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:14:44] 2025-06-04 12:14:33,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:14:44] 2025-06-04 12:14:33,111 | INFO     | did not find any defunct processes belonging to 1034458
[2025-06-04 08:14:44] 2025-06-04 12:14:33,129 | INFO     | did not find any defunct processes belonging to 1034458
[2025-06-04 08:14:44] 2025-06-04 12:14:33,129 | INFO     | ready for new job
[2025-06-04 08:14:44] 2025-06-04 12:14:33,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:14:44] 2025-06-04 12:14:33,132 | INFO     | **************************************
[2025-06-04 08:14:44] 2025-06-04 12:14:33,133 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:14:44] 2025-06-04 12:14:33,133 | INFO     | **************************************
[2025-06-04 08:14:44] 2025-06-04 12:14:33,133 | INFO     | 
[2025-06-04 08:14:44] 2025-06-04 12:14:33,152 | INFO     | architecture information:
[2025-06-04 08:14:44] 2025-06-04 12:14:33,152 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:14:44] 2025-06-04 12:14:33,183 | INFO     | cat /etc/os-release:
[2025-06-04 08:14:44] NAME="CentOS Linux"
[2025-06-04 08:14:44] VERSION="7 (Core)"
[2025-06-04 08:14:44] ID="centos"
[2025-06-04 08:14:44] ID_LIKE="rhel fedora"
[2025-06-04 08:14:44] VERSION_ID="7"
[2025-06-04 08:14:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:14:44] ANSI_COLOR="0;31"
[2025-06-04 08:14:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:14:44] HOME_URL="https://www.centos.org/"
[2025-06-04 08:14:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:14:44] 
[2025-06-04 08:14:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:14:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:14:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:14:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:14:44] 
[2025-06-04 08:14:44] 2025-06-04 12:14:33,183 | INFO     | **************************************
[2025-06-04 08:14:44] 2025-06-04 12:14:33,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:14:44] 2025-06-04 12:14:33,711 | INFO     | sufficient remaining disk space (76130811904 B)
[2025-06-04 08:14:44] 2025-06-04 12:14:33,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:14:44] 2025-06-04 12:14:33,712 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:14:44] 2025-06-04 12:14:33,712 | INFO     | update_server=False
[2025-06-04 08:14:44] 2025-06-04 12:14:33,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:14:44] 2025-06-04 12:14:33,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:14:44] 2025-06-04 12:14:33,955 | INFO     | all job control threads have been joined
[2025-06-04 08:14:44] 2025-06-04 12:14:34,087 | INFO     | all data control threads have been joined
[2025-06-04 08:14:44] 2025-06-04 12:14:34,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:14:44] 2025-06-04 12:14:34,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:14:44] 2025-06-04 12:14:34,455 | INFO     | aborting loop
[2025-06-04 08:14:44] 2025-06-04 12:14:34,670 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:14:44] 2025-06-04 12:14:34,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:14:44] 2025-06-04 12:14:34,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:14:44] 2025-06-04 12:14:34,718 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:34,744 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:34,839 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:34,854 | INFO     | all payload control threads have been joined
[2025-06-04 08:14:44] 2025-06-04 12:14:34,864 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:34,918 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:34,951 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:34,960 | INFO     | [job] control thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:35,093 | INFO     | [data] control thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:35,411 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:35,460 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:35,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:14:44] 2025-06-04 12:14:35,718 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:35,803 | INFO     | [job] validate thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:35,860 | INFO     | [payload] control thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:36,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:36,486 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:38,226 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:14:44] 2025-06-04 12:14:39,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251412567872)>', '<ExcThread(monitor, started 140250479326976)>']
[2025-06-04 08:14:44] 2025-06-04 12:14:39,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:14:44] 2025-06-04 12:14:39,702 | INFO     | [monitor] control thread has ended
[2025-06-04 08:14:44] 2025-06-04 12:14:44,380 | INFO     | all workflow threads have been joined
[2025-06-04 08:14:44] 2025-06-04 12:14:44,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:14:44] 2025-06-04 12:14:44,381 | INFO     | traces error code: 0
[2025-06-04 08:14:44] 2025-06-04 12:14:44,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:14:44] 2025-06-04 12:14:44,640 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:14:44] 2025-06-04 12:14:44,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:14:44] 2025-06-04 12:14:44,647 [wrapper] pilotpid: 1026148
[2025-06-04 08:14:44] 2025-06-04 12:14:44,650 [wrapper] Pilot exit status: 0
[2025-06-04 08:14:44] 2025-06-04 12:14:44,665 [wrapper] pandaids: 6678245586
[2025-06-04 08:14:44] 2025-06-04 12:14:44,761 [wrapper] cleanup supervisor_pilot 2973210 1026149
[2025-06-04 08:14:44] 2025-06-04 12:14:44,765 [wrapper] Test setup, not cleaning
[2025-06-04 08:14:44] 2025-06-04 12:14:44,768 [wrapper] apfmon messages muted
[2025-06-04 08:14:44] 2025-06-04 12:14:44,771 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:14:44] 2025-06-04 12:14:44,774 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:14:44]  *** Error codes and diagnostics ***
[2025-06-04 08:14:44]     "exeErrorCode": 0,
[2025-06-04 08:14:44]     "exeErrorDiag": "",
[2025-06-04 08:14:44]     "pilotErrorCode": 0,
[2025-06-04 08:14:44]     "pilotErrorDiag": "",
[2025-06-04 08:14:44]  *** Listing of results directory ***
[2025-06-04 08:14:44] total 390652
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 20:59 pilot3.tar.gz
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 21:11 queuedata.json
[2025-06-04 08:14:44] -rwx------. 1 boincer umatlas     37140 Jun  3 21:12 runpilot2-wrapper.sh
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas       100 Jun  4 02:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:14:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 02:11 run_atlas
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas       105 Jun  4 02:11 job.xml
[2025-06-04 08:14:44] -rw-r--r--. 2 boincer umatlas 216695903 Jun  4 02:11 EVNT.45006593._001996.pool.root.1
[2025-06-04 08:14:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:11 start_atlas.sh
[2025-06-04 08:14:44] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 02:11 shared
[2025-06-04 08:14:44] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 02:11 input.tar.gz
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas         0 Jun  4 02:11 boinc_lockfile
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 02:11 pandaJob.out
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas    986745 Jun  4 02:11 agis_schedconf.cvmfs.json
[2025-06-04 08:14:44] drwx------. 4 boincer umatlas      4096 Jun  4 02:11 pilot3
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 08:12 init_data.xml
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas        95 Jun  4 08:13 pilot_heartbeat.json
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas 175149390 Jun  4 08:13 HITS.45006595._049785.pool.root.1
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas       531 Jun  4 08:13 boinc_task_state.xml
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas      1038 Jun  4 08:14 memory_monitor_summary.json
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas    482624 Jun  4 08:14 log.45006595._049785.job.log.tgz.1
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas      7711 Jun  4 08:14 heartbeat.json
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas        28 Jun  4 08:14 wrapper_checkpoint.txt
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:14 boinc_mmap_file
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas      4353 Jun  4 08:14 pilotlog.txt
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas   1692988 Jun  4 08:14 log.45006595._049785.job.log.1
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas       357 Jun  4 08:14 output.list
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:14 runtime_log
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas   2191360 Jun  4 08:14 result.tar.gz
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas      8652 Jun  4 08:14 runtime_log.err
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas       653 Jun  4 08:14 odmNDmLrrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmISaKDmXou1Tn.diag
[2025-06-04 08:14:44] -rw-r--r--. 1 boincer umatlas     21262 Jun  4 08:14 stderr.txt
[2025-06-04 08:14:44] HITS file was successfully produced:
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas 175149390 Jun  4 08:13 shared/HITS.pool.root.1
[2025-06-04 08:14:44]  *** Contents of shared directory: ***
[2025-06-04 08:14:44] total 385332
[2025-06-04 08:14:44] -rw-r--r--. 2 boincer umatlas 216695903 Jun  4 02:11 ATLAS.root_0
[2025-06-04 08:14:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 02:11 start_atlas.sh
[2025-06-04 08:14:44] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 02:11 input.tar.gz
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas 175149390 Jun  4 08:13 HITS.pool.root.1
[2025-06-04 08:14:44] -rw-------. 1 boincer umatlas   2191360 Jun  4 08:14 result.tar.gz
08:14:46 (1021435): run_atlas exited; CPU time 39065.251269
08:14:46 (1021435): called boinc_finish(0)

</stderr_txt>
]]>

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