Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:07:20 (1382120): wrapper (7.7.26015): starting
23:07:20 (1382120): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 23:07:20] Arguments: --nthreads 12
[2025-06-03 23:07:20] Threads: 12
[2025-06-03 23:07:20] Checking for CVMFS
[2025-06-03 23:07:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:07:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:07:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:07:22] 2.11.5.0 183045 32723 152132 146769 1 532 35454546 45568001 24969 130560 0 248793813 99.777 180548446 28444 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 23:07:22] CVMFS is ok
[2025-06-03 23:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:07:22] Further information can be found at the LHC@home message board.
[2025-06-03 23:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:07:22] Checking for apptainer binary...
[2025-06-03 23:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:07:22] Running /usr/bin/apptainer --version
[2025-06-03 23:07:22] apptainer version 1.4.0-1.el9
[2025-06-03 23:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:07:23] wns0158.triumf.lcg
[2025-06-03 23:07:23] apptainer works
[2025-06-03 23:07:23] Set ATHENA_PROC_NUMBER=12
[2025-06-03 23:07:23] Set ATHENA_CORE_NUMBER=12
[2025-06-03 23:07:24] Starting ATLAS job with PandaID=6678287088
[2025-06-03 23:07:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:12:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | WARNING  | wrong length of table data, x=[1749017341.0], y=[921.0] (must be same and length>=4)
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | ..............................
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . Timing measurements:
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . get job = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . initial setup = 4 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . payload setup = 17 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . stage-in = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . payload execution = 39 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . stage-out = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . log creation = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | ..............................
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678287088/pilotlog.txt
[2025-06-03 23:12:07] 2025-06-04 06:11:47,093 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 23:12:07] - Log from pilotlog.txt -
[2025-06-03 23:12:07] 2025-06-04 06:11:46,993 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 23:12:07] 2025-06-04 06:11:46,994 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678287088/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | INFO     | extracted standard info from prmon json
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | WARNING  | wrong length of table data, x=[1749017341.0], y=[921.0] (must be same and length>=4)
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | ..............................
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . Timing measurements:
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . get job = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . initial setup = 4 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . payload setup = 17 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . stage-in = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . payload execution = 39 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . stage-out = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . log creation = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | ..............................
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678287088/pilotlog.txt
[2025-06-03 23:12:07] 2025-06-04 06:11:47,093 | WARNING  | 
[2025-06-03 23:12:07] [begin log extracts]
[2025-06-03 23:12:07] - Log from pilotlog.txt -
[2025-06-03 23:12:07] 2025-06-04 06:11:46,993 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 23:12:07] 2025-06-04 06:11:46,994 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678287088/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | INFO     | extracted standard info from prmon json
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:12:07] 2025-06-04 06:11:46,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | WARNING  | wrong length of table data, x=[1749017341.0], y=[921.0] (must be same and length>=4)
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | ..............................
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . Timing measurements:
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . get job = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,996 | INFO     | . initial setup = 4 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . payload setup = 17 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . stage-in = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . payload execution = 39 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . stage-out = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | . log creation = 0 s
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | ..............................
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 23:12:07] 2025-06-04 06:11:46,997 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678287088/pilotlog.txt
[2025-06-03 23:12:07] [end log extracts]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,093 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 23:12:07] 2025-06-04 06:11:47,094 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | 
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | job summary report
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | --------------------------------------------------
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | PanDA job id: 6678287088
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | task id: 45006595
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 23:09:21,117 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | pilot state: failed 
[2025-06-03 23:12:07] 2025-06-04 06:11:47,375 | INFO     | transexitcode: 65
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | exeerrorcode: 65
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | exitcode: 65
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | cpuconsumptiontime: 21 s
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | nevents: 0
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | neventsw: 0
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | pid: 1405380
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | pgrp: 1405380
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | corecount: 12
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | event service: False
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | sizes: {0: 2404954, 1: 2405209, 12: 2405209, 13: 2405443, 22: 2405499, 62: 2428980, 63: 2433215, 64: 2433243, 197: 2433413}
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | --------------------------------------------------
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | 
[2025-06-03 23:12:07] 2025-06-04 06:11:47,376 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 23:12:07] 2025-06-04 06:11:47,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | job 6678287088 has completed (purged errors)
[2025-06-03 23:12:07] 2025-06-04 06:11:47,446 | INFO     | overall cleanup function is called
[2025-06-03 23:12:07] 2025-06-04 06:11:48,473 | INFO     | --- collectZombieJob: --- 10, [1405380]
[2025-06-03 23:12:07] 2025-06-04 06:11:48,474 | INFO     | zombie collector waiting for pid 1405380
[2025-06-03 23:12:07] 2025-06-04 06:11:48,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:12:07] 2025-06-04 06:11:48,474 | INFO     | collected zombie processes
[2025-06-03 23:12:07] 2025-06-04 06:11:48,474 | INFO     | will attempt to kill all subprocesses of pid=1405380
[2025-06-03 23:12:07] 2025-06-04 06:11:50,666 | INFO     | process IDs to be killed: [1405380] (in reverse order)
[2025-06-03 23:12:07] 2025-06-04 06:11:50,869 | INFO     | PID=1389572 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 23:12:07] 2025-06-04 06:11:50,870 | INFO     | .. there are 41 such processes running
[2025-06-03 23:12:07] 2025-06-04 06:11:50,933 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:12:07] 2025-06-04 06:11:50,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:12:07] 2025-06-04 06:11:50,994 | INFO     | did not find any defunct processes belonging to 1405380
[2025-06-03 23:12:07] 2025-06-04 06:11:51,006 | INFO     | did not find any defunct processes belonging to 1405380
[2025-06-03 23:12:07] 2025-06-04 06:11:51,006 | INFO     | ready for new job
[2025-06-03 23:12:07] 2025-06-04 06:11:51,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:12:07] 2025-06-04 06:11:51,008 | INFO     | **************************************
[2025-06-03 23:12:07] 2025-06-04 06:11:51,008 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:12:07] 2025-06-04 06:11:51,008 | INFO     | **************************************
[2025-06-03 23:12:07] 2025-06-04 06:11:51,008 | INFO     | 
[2025-06-03 23:12:07] 2025-06-04 06:11:51,010 | INFO     | architecture information:
[2025-06-03 23:12:07] 2025-06-04 06:11:51,011 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:12:07] 2025-06-04 06:11:51,027 | INFO     | cat /etc/os-release:
[2025-06-03 23:12:07] NAME="CentOS Linux"
[2025-06-03 23:12:07] VERSION="7 (Core)"
[2025-06-03 23:12:07] ID="centos"
[2025-06-03 23:12:07] ID_LIKE="rhel fedora"
[2025-06-03 23:12:07] VERSION_ID="7"
[2025-06-03 23:12:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:12:07] ANSI_COLOR="0;31"
[2025-06-03 23:12:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:12:07] HOME_URL="https://www.centos.org/"
[2025-06-03 23:12:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:12:07] 
[2025-06-03 23:12:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:12:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:12:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:12:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:12:07] 
[2025-06-03 23:12:07] 2025-06-04 06:11:51,027 | INFO     | **************************************
[2025-06-03 23:12:07] 2025-06-04 06:11:51,534 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 23:12:07] 2025-06-04 06:11:51,655 | INFO     | sufficient remaining disk space (1791728025600 B)
[2025-06-03 23:12:07] 2025-06-04 06:11:51,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:12:07] 2025-06-04 06:11:51,655 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:12:07] 2025-06-04 06:11:51,656 | INFO     | update_server=False
[2025-06-03 23:12:07] 2025-06-04 06:11:51,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:12:07] 2025-06-04 06:11:51,665 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:12:07] 2025-06-04 06:11:51,666 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:12:07] 2025-06-04 06:11:51,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:12:07] 2025-06-04 06:11:51,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:12:07] 2025-06-04 06:11:51,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:12:07] 2025-06-04 06:11:51,839 | INFO     | all data control threads have been joined
[2025-06-03 23:12:07] 2025-06-04 06:11:52,013 | INFO     | all payload control threads have been joined
[2025-06-03 23:12:07] 2025-06-04 06:11:52,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:12:07] 2025-06-04 06:11:52,329 | INFO     | aborting loop
[2025-06-03 23:12:07] 2025-06-04 06:11:52,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:12:07] 2025-06-04 06:11:52,394 | INFO     | all job control threads have been joined
[2025-06-03 23:12:07] 2025-06-04 06:11:52,663 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:52,730 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:52,845 | INFO     | [data] control thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:52,880 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:52,980 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,019 | INFO     | [payload] control thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,307 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,337 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,394 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,400 | INFO     | [job] control thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,506 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,814 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:53,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:54,098 | INFO     | [job] validate thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:54,142 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:11:55,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:12:07] 2025-06-04 06:11:59,032 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:12:07] 2025-06-04 06:12:00,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687205103424)>', '<ExcThread(monitor, started 139686655796992)>']
[2025-06-03 23:12:07] 2025-06-04 06:12:01,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:12:07] 2025-06-04 06:12:01,727 | INFO     | [monitor] control thread has ended
[2025-06-03 23:12:07] 2025-06-04 06:12:05,877 | INFO     | all workflow threads have been joined
[2025-06-03 23:12:07] 2025-06-04 06:12:05,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:12:07] 2025-06-04 06:12:05,878 | INFO     | traces error code: 0
[2025-06-03 23:12:07] 2025-06-04 06:12:05,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:12:07] 2025-06-04 06:12:06,167 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:12:07] 2025-06-04 06:12:06,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:12:07] 2025-06-04 06:12:06,225 [wrapper] pilotpid: 1389572
[2025-06-03 23:12:07] 2025-06-04 06:12:06,250 [wrapper] Pilot exit status: 0
[2025-06-03 23:12:07] 2025-06-04 06:12:06,353 [wrapper] pandaids: 6678287088
[2025-06-03 23:12:07] 2025-06-04 06:12:06,620 [wrapper] cleanup supervisor_pilot 1389578 1389573
[2025-06-03 23:12:07] 2025-06-04 06:12:06,678 [wrapper] Test setup, not cleaning
[2025-06-03 23:12:07] 2025-06-04 06:12:06,690 [wrapper] apfmon messages muted
[2025-06-03 23:12:07] 2025-06-04 06:12:06,707 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:12:07] 2025-06-04 06:12:06,724 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:12:07]  *** Error codes and diagnostics ***
[2025-06-03 23:12:07]     "exeErrorCode": 65,
[2025-06-03 23:12:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 23:12:07]     "pilotErrorCode": 1305,
[2025-06-03 23:12:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 23:12:07]  *** Listing of results directory ***
[2025-06-03 23:12:07] total 215120
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:29 pilot3.tar.gz
[2025-06-03 23:12:07] -rwx------. 1 boinc boinc     37140 Jun  3 20:42 runpilot2-wrapper.sh
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:42 queuedata.json
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:12:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:07 run_atlas
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:07 job.xml
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc      6597 Jun  3 23:07 init_data.xml
[2025-06-03 23:12:07] -rw-r--r--. 2 boinc boinc 216244561 Jun  3 23:07 EVNT.45006593._002073.pool.root.1
[2025-06-03 23:12:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:07 start_atlas.sh
[2025-06-03 23:12:07] drwxrwx--x. 2 boinc boinc      4096 Jun  3 23:07 shared
[2025-06-03 23:12:07] -rw-r--r--. 2 boinc boinc    508879 Jun  3 23:07 input.tar.gz
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:07 boinc_lockfile
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc      2525 Jun  3 23:07 pandaJob.out
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc    986745 Jun  3 23:07 agis_schedconf.cvmfs.json
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc   1603667 Jun  3 23:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:12:07] drwx------. 4 boinc boinc      4096 Jun  3 23:07 pilot3
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc       951 Jun  3 23:09 memory_monitor_summary.json
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc     21201 Jun  3 23:09 log.45006595._051735.job.log.tgz.1
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc        95 Jun  3 23:10 pilot_heartbeat.json
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc      8329 Jun  3 23:11 heartbeat.json
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc       525 Jun  3 23:11 boinc_task_state.xml
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:12 boinc_mmap_file
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc        23 Jun  3 23:12 wrapper_checkpoint.txt
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc      4475 Jun  3 23:12 pilotlog.txt
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc     78915 Jun  3 23:12 log.45006595._051735.job.log.1
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc       188 Jun  3 23:12 output.list
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc       620 Jun  3 23:12 runtime_log
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc    122880 Jun  3 23:12 result.tar.gz
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc      8484 Jun  3 23:12 runtime_log.err
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc       644 Jun  3 23:12 BMuLDmCCug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx4mKDmEM4dRm.diag
[2025-06-03 23:12:07] -rw-r--r--. 1 boinc boinc     21763 Jun  3 23:12 stderr.txt
[2025-06-03 23:12:07] No HITS result produced
[2025-06-03 23:12:07]  *** Contents of shared directory: ***
[2025-06-03 23:12:07] total 211816
[2025-06-03 23:12:07] -rw-r--r--. 2 boinc boinc 216244561 Jun  3 23:07 ATLAS.root_0
[2025-06-03 23:12:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:07 start_atlas.sh
[2025-06-03 23:12:07] -rw-r--r--. 2 boinc boinc    508879 Jun  3 23:07 input.tar.gz
[2025-06-03 23:12:07] -rw-------. 1 boinc boinc    122880 Jun  3 23:12 result.tar.gz
23:12:09 (1382120): run_atlas exited; CPU time 31.146227
23:12:09 (1382120): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN