Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:20:42 (956482): wrapper (7.7.26015): starting
18:20:42 (956482): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 18:20:42] Arguments: --nthreads 3
[2025-06-05 18:20:42] Threads: 3
[2025-06-05 18:20:42] Checking for CVMFS
[2025-06-05 18:21:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 18:21:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 18:21:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 18:21:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 18:21:27] 2.11.5.0 956699 0 30788 146814 3 1 45109074 52428801 0 130560 0 0 0.000 1292 66 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 18:21:27] CVMFS is ok
[2025-06-05 18:21:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:21:27] Checking for apptainer binary...
[2025-06-05 18:21:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 18:21:27] Running /usr/bin/apptainer --version
[2025-06-05 18:21:27] apptainer version 1.3.5-1.el9
[2025-06-05 18:21:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:21:27] testio004
[2025-06-05 18:21:27] apptainer works
[2025-06-05 18:21:27] Set ATHENA_PROC_NUMBER=3
[2025-06-05 18:21:27] Set ATHENA_CORE_NUMBER=3
[2025-06-05 18:21:27] Starting ATLAS job with PandaID=6678244535
[2025-06-05 18:21:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:13:13]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:13:13] 2025-06-05 11:12:55,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:13:13] 2025-06-05 11:12:55,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:13:13] 2025-06-05 11:12:55,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | sum of deviations: 11473080446.000008
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | mean x: 1749118685.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | mean y: 2306827.161904762
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | -- intersect: -55908066261.963486
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | intersect: -55908066261.963486
[2025-06-05 20:13:13] 2025-06-05 11:12:55,416 | INFO     | chi2: 4.2708128910816745
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | sum of square deviations: 310052325.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | sum of deviations: 17107884899.500004
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | mean x: 1749118532.5
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | mean y: 2323690.91
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | -- intersect: -96509510334.4996
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | intersect: -96509510334.4996
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | chi2: 3.6498039616060884
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | current chi2=3.6498039616060884 (change=14.540766484347253 %)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | right removable region: 99
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | sum of square deviations: 310052325.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | sum of deviations: -9624301108.000002
[2025-06-05 20:13:13] 2025-06-05 11:12:55,417 | INFO     | mean x: 1749118837.5
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | mean y: 2372202.18
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | -- intersect: 54296583238.25246
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | intersect: 54296583238.25246
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | chi2: 2.0137875128782654
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | current chi2=2.0137875128782654 (change=52.847676443904554 %)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | sum of square deviations: 265828240.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | sum of deviations: -23890936639.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | mean x: 1749118990.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | mean y: 2421422.2210526317
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | -- intersect: 157202013776.1473
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | intersect: 157202013776.1473
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | chi2: 0.9758816946353063
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | current chi2=0.9758816946353063 (change=51.53998679629815 %)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,418 | INFO     | sum of square deviations: 226022842.5
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | sum of deviations: -22812525020.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | mean x: 1749119142.5
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | mean y: 2416849.3333333335
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | -- intersect: 176541317784.72086
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | intersect: 176541317784.72086
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | chi2: 0.8895283206074787
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | current chi2=0.8895283206074787 (change=8.848754362597044 %)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | left removable region: 30
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | sum of square deviations: 101843770.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | sum of deviations: -4897716718.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | mean x: 1749119417.0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | mean y: 2380157.115942029
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | -- intersect: 84118388533.66478
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | intersect: 84118388533.66478
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | chi2: 0.14194500908457042
[2025-06-05 20:13:13] 2025-06-05 11:12:55,419 | INFO     | -- intersect: 84118388533.66478
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | current memory leak: -48.09 B/s (using 69 data points, chi2=0.14)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | ..............................
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . Timing measurements:
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . get job = 0 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . initial setup = 6 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . payload setup = 5 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . stage-in = 0 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . payload execution = 6351 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . stage-out = 0 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | . log creation = 0 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,420 | INFO     | ..............................
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | 
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | job summary report
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | --------------------------------------------------
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | PanDA job id: 6678244535
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | task id: 45006595
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | errors: (none)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | pilot state: finished 
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | transexitcode: 0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | exeerrorcode: 0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | exeerrordiag: 
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | exitcode: 0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | exitmsg: OK
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | cpuconsumptiontime: 16880 s
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | nevents: 400
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | neventsw: 0
[2025-06-05 20:13:13] 2025-06-05 11:12:55,458 | INFO     | pid: 967033
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | pgrp: 967033
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | corecount: 3
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | event service: False
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | sizes: {0: 2397342, 1: 2397342, 4: 2397576, 11: 2397604, 6359: 2424510, 6360: 2433634, 6362: 2433634, 6471: 2433804}
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | --------------------------------------------------
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | 
[2025-06-05 20:13:13] 2025-06-05 11:12:55,459 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:13:13] 2025-06-05 11:12:55,470 | INFO     | job 6678244535 has completed (purged errors)
[2025-06-05 20:13:13] 2025-06-05 11:12:55,470 | INFO     | overall cleanup function is called
[2025-06-05 20:13:13] 2025-06-05 11:12:56,476 | INFO     | --- collectZombieJob: --- 10, [967033]
[2025-06-05 20:13:13] 2025-06-05 11:12:56,476 | INFO     | zombie collector waiting for pid 967033
[2025-06-05 20:13:13] 2025-06-05 11:12:56,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:13:13] 2025-06-05 11:12:56,476 | INFO     | collected zombie processes
[2025-06-05 20:13:13] 2025-06-05 11:12:56,476 | INFO     | will attempt to kill all subprocesses of pid=967033
[2025-06-05 20:13:13] 2025-06-05 11:12:56,506 | INFO     | process IDs to be killed: [967033] (in reverse order)
[2025-06-05 20:13:13] 2025-06-05 11:12:56,525 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:13:13] 2025-06-05 11:12:56,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:13:13] 2025-06-05 11:12:56,526 | INFO     | did not find any defunct processes belonging to 967033
[2025-06-05 20:13:13] 2025-06-05 11:12:56,527 | INFO     | did not find any defunct processes belonging to 967033
[2025-06-05 20:13:13] 2025-06-05 11:12:56,527 | INFO     | ready for new job
[2025-06-05 20:13:13] 2025-06-05 11:12:56,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:13:13] 2025-06-05 11:12:56,528 | INFO     | **************************************
[2025-06-05 20:13:13] 2025-06-05 11:12:56,528 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:13:13] 2025-06-05 11:12:56,528 | INFO     | **************************************
[2025-06-05 20:13:13] 2025-06-05 11:12:56,528 | INFO     | 
[2025-06-05 20:13:13] 2025-06-05 11:12:56,529 | INFO     | architecture information:
[2025-06-05 20:13:13] 2025-06-05 11:12:56,529 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:13:13] 2025-06-05 11:12:56,536 | INFO     | cat /etc/os-release:
[2025-06-05 20:13:13] NAME="CentOS Linux"
[2025-06-05 20:13:13] VERSION="7 (Core)"
[2025-06-05 20:13:13] ID="centos"
[2025-06-05 20:13:13] ID_LIKE="rhel fedora"
[2025-06-05 20:13:13] VERSION_ID="7"
[2025-06-05 20:13:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:13:13] ANSI_COLOR="0;31"
[2025-06-05 20:13:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:13:13] HOME_URL="https://www.centos.org/"
[2025-06-05 20:13:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:13:13] 
[2025-06-05 20:13:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:13:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:13:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:13:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:13:13] 
[2025-06-05 20:13:13] 2025-06-05 11:12:56,536 | INFO     | **************************************
[2025-06-05 20:13:13] 2025-06-05 11:12:57,039 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-05 20:13:13] 2025-06-05 11:12:57,047 | INFO     | sufficient remaining disk space (323769860096 B)
[2025-06-05 20:13:13] 2025-06-05 11:12:57,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | INFO     | update_server=False
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:13:13] 2025-06-05 11:12:57,048 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:13:13] 2025-06-05 11:12:57,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:13:13] 2025-06-05 11:12:57,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:13:13] 2025-06-05 11:12:57,164 | INFO     | all payload control threads have been joined
[2025-06-05 20:13:13] 2025-06-05 11:12:57,513 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 20:13:13] 2025-06-05 11:12:57,513 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 20:13:13] 2025-06-05 11:12:57,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:13:13] 2025-06-05 11:12:57,513 | INFO     | will abort loop
[2025-06-05 20:13:13] 2025-06-05 11:12:57,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:13:13] 2025-06-05 11:12:57,641 | INFO     | all data control threads have been joined
[2025-06-05 20:13:13] 2025-06-05 11:12:57,736 | INFO     | all job control threads have been joined
[2025-06-05 20:13:13] 2025-06-05 11:12:58,049 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,053 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,081 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,169 | INFO     | [payload] control thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,381 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,387 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,518 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,646 | INFO     | [data] control thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,742 | INFO     | [job] control thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,805 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,892 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:58,897 | INFO     | [job] validate thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:59,123 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:12:59,543 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:13:01,054 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:13:07,182 | INFO     | job.realtimelogging is not enabled
[2025-06-05 20:13:13] 2025-06-05 11:13:08,187 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:13:13] 2025-06-05 11:13:08,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931963901760)>', '<ExcThread(monitor, started 139931611543296)>']
[2025-06-05 20:13:13] 2025-06-05 11:13:09,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:13:13] 2025-06-05 11:13:09,107 | INFO     | [monitor] control thread has ended
[2025-06-05 20:13:13] 2025-06-05 11:13:13,312 | INFO     | all workflow threads have been joined
[2025-06-05 20:13:13] 2025-06-05 11:13:13,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:13:13] 2025-06-05 11:13:13,312 | INFO     | traces error code: 0
[2025-06-05 20:13:13] 2025-06-05 11:13:13,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:13:13] 2025-06-05 11:13:13,370 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:13:13] 2025-06-05 11:13:13,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:13:13] 2025-06-05 11:13:13,373 [wrapper] pilotpid: 960691
[2025-06-05 20:13:13] 2025-06-05 11:13:13,375 [wrapper] Pilot exit status: 0
[2025-06-05 20:13:13] 2025-06-05 11:13:13,381 [wrapper] pandaids: 6678244535
[2025-06-05 20:13:13] 2025-06-05 11:13:13,393 [wrapper] cleanup supervisor_pilot  980803 960692
[2025-06-05 20:13:13] 2025-06-05 11:13:13,395 [wrapper] Test setup, not cleaning
[2025-06-05 20:13:13] 2025-06-05 11:13:13,397 [wrapper] apfmon messages muted
[2025-06-05 20:13:13] 2025-06-05 11:13:13,399 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:13:13] 2025-06-05 11:13:13,400 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:13:13]  *** Error codes and diagnostics ***
[2025-06-05 20:13:13]     "exeErrorCode": 0,
[2025-06-05 20:13:13]     "exeErrorDiag": "",
[2025-06-05 20:13:13]     "pilotErrorCode": 0,
[2025-06-05 20:13:13]     "pilotErrorDiag": "",
[2025-06-05 20:13:13]  *** Listing of results directory ***
[2025-06-05 20:13:13] total 393232
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc    495897 Jun  4 08:58 pilot3.tar.gz
[2025-06-05 20:13:13] -rwx------. 1 boinc boinc     37140 Jun  4 09:57 runpilot2-wrapper.sh
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:57 queuedata.json
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc       100 Jun  5 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:13:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 18:20 run_atlas
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc       105 Jun  5 18:20 job.xml
[2025-06-05 20:13:13] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:20 start_atlas.sh
[2025-06-05 20:13:13] drwxrwx--x. 2 boinc boinc        68 Jun  5 18:20 shared
[2025-06-05 20:13:13] -rw-r--r--. 2 boinc boinc    508883 Jun  5 18:20 input.tar.gz
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc      6507 Jun  5 18:20 init_data.xml
[2025-06-05 20:13:13] -rw-r--r--. 2 boinc boinc 217292244 Jun  5 18:20 EVNT.45006593._001986.pool.root.1
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc         0 Jun  5 18:20 boinc_lockfile
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc      2525 Jun  5 18:21 pandaJob.out
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc    983289 Jun  5 18:24 agis_schedconf.cvmfs.json
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc   1598969 Jun  5 18:24 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:13:13] drwx------. 4 boinc boinc      4096 Jun  5 18:24 pilot3
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc 179879002 Jun  5 20:10 HITS.45006595._049540.pool.root.1
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc       529 Jun  5 20:10 boinc_task_state.xml
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc      1012 Jun  5 20:11 memory_monitor_summary.json
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc    247318 Jun  5 20:11 log.45006595._049540.job.log.tgz.1
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc        95 Jun  5 20:12 pilot_heartbeat.json
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc      8192 Jun  5 20:12 boinc_mmap_file
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc        27 Jun  5 20:12 wrapper_checkpoint.txt
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc      7658 Jun  5 20:12 heartbeat.json
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc      4735 Jun  5 20:13 pilotlog.txt
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc    598786 Jun  5 20:13 log.45006595._049540.job.log.1
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc       357 Jun  5 20:13 output.list
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc       620 Jun  5 20:13 runtime_log
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc    860160 Jun  5 20:13 result.tar.gz
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc      8617 Jun  5 20:13 runtime_log.err
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc       643 Jun  5 20:13 KSsNDmUcrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLjmKDmdqYcdm.diag
[2025-06-05 20:13:13] -rw-r--r--. 1 boinc boinc     20447 Jun  5 20:13 stderr.txt
[2025-06-05 20:13:13] HITS file was successfully produced:
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc 179879002 Jun  5 20:10 shared/HITS.pool.root.1
[2025-06-05 20:13:13]  *** Contents of shared directory: ***
[2025-06-05 20:13:13] total 389220
[2025-06-05 20:13:13] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:20 start_atlas.sh
[2025-06-05 20:13:13] -rw-r--r--. 2 boinc boinc    508883 Jun  5 18:20 input.tar.gz
[2025-06-05 20:13:13] -rw-r--r--. 2 boinc boinc 217292244 Jun  5 18:20 ATLAS.root_0
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc 179879002 Jun  5 20:10 HITS.pool.root.1
[2025-06-05 20:13:13] -rw-------. 1 boinc boinc    860160 Jun  5 20:13 result.tar.gz
20:13:14 (956482): run_atlas exited; CPU time 16904.368969
20:13:14 (956482): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN