Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:58:23 (3690006): wrapper (7.7.26015): starting
15:58:23 (3690006): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:58:23] Arguments: --nthreads 4
[2025-06-04 15:58:23] Threads: 4
[2025-06-04 15:58:23] Checking for CVMFS
[2025-06-04 15:58:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:58:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:58:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:58:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:58:23] 2.9.2.0 2645185 2739 93884 146781 0 56 30133986 36864001 0 130560 0 2796634 99.993 676726 34067 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 15:58:23] CVMFS is ok
[2025-06-04 15:58:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:58:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:58:23] Further information can be found at the LHC@home message board.
[2025-06-04 15:58:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:58:23] Checking for apptainer binary...
[2025-06-04 15:58:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:58:23] Running /usr/bin/apptainer --version
[2025-06-04 15:58:23] apptainer version 1.3.6-6.1
[2025-06-04 15:58:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:58:24] belleA267b
[2025-06-04 15:58:24] apptainer works
[2025-06-04 15:58:24] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:58:24] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:58:24] Starting ATLAS job with PandaID=6678153397
[2025-06-04 15:58:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:04:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:04:47]  filetype=log
[2025-06-04 17:04:47]  guid=8b42184f-77f2-4973-823c-5934dc366ea4
[2025-06-04 17:04:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 17:04:47]  is_altstaged=None
[2025-06-04 17:04:47]  is_tar=False
[2025-06-04 17:04:47]  lfn=log.45006595._047415.job.log.tgz.1
[2025-06-04 17:04:47]  mtime=0
[2025-06-04 17:04:47]  protocol_id=None
[2025-06-04 17:04:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:04:47]  replicas=None
[2025-06-04 17:04:47]  scope=mc23_13p6TeV
[2025-06-04 17:04:47]  status=None
[2025-06-04 17:04:47]  status_code=0
[2025-06-04 17:04:47]  storage_token=
[2025-06-04 17:04:47]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678153397/log.45006595._047415.job.log.tgz.1
[2025-06-04 17:04:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/d2/log.45006595._047415.job.log.tgz.1
[2025-06-04 17:04:47]  workdir=None
[2025-06-04 17:04:47] ]
[2025-06-04 17:04:47] 2025-06-04 15:04:30,100 | INFO     | transferring file log.45006595._047415.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678153397/log.45006595._047415.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 17:04:47] 2025-06-04 15:04:30,100 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678153397/log.45006595._047415.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0474
[2025-06-04 17:04:47] 2025-06-04 15:04:30,119 | INFO     | adding to output.list: log.45006595._047415.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/d2/log.45006595._047415.job.log.tg
[2025-06-04 17:04:47] 2025-06-04 15:04:30,120 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:04:47] 2025-06-04 15:04:30,120 | INFO     | summary of transferred files:
[2025-06-04 17:04:47] 2025-06-04 15:04:30,120 | INFO     |  -- lfn=log.45006595._047415.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:04:47] 2025-06-04 15:04:30,120 | INFO     | stage-out finished correctly
[2025-06-04 17:04:47] 2025-06-04 15:04:30,573 | INFO     | PID=3693701 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 17:04:47] 2025-06-04 15:04:31,922 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:04:47] 2025-06-04 15:04:31,965 | INFO     | job 6678153397 has state=finished
[2025-06-04 17:04:47] 2025-06-04 15:04:31,965 | INFO     | preparing for final server update for job 6678153397 in state='finished'
[2025-06-04 17:04:47] 2025-06-04 15:04:31,966 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:04:47] 2025-06-04 15:04:31,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:04:47] 2025-06-04 15:04:31,966 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:04:47] 2025-06-04 15:04:31,966 | INFO     | job 6678153397 has finished - writing final server update
[2025-06-04 17:04:47] 2025-06-04 15:04:31,966 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:04:47] 2025-06-04 15:04:31,967 | INFO     | executing command: lscpu
[2025-06-04 17:04:47] 2025-06-04 15:04:31,988 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:04:47] 2025-06-04 15:04:32,418 | INFO     | monitor loop #306: job 0:6678153397 is in state 'finished'
[2025-06-04 17:04:47] 2025-06-04 15:04:32,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:04:47] 2025-06-04 15:04:34,921 | INFO     | monitor loop #307: job 0:6678153397 is in state 'finished'
[2025-06-04 17:04:47] 2025-06-04 15:04:34,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:04:47] 2025-06-04 15:04:35,492 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:04:47] 2025-06-04 15:04:35,492 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678153397/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:04:47] 2025-06-04 15:04:35,493 | INFO     | extracted standard info from prmon json
[2025-06-04 17:04:47] 2025-06-04 15:04:35,493 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:04:47] 2025-06-04 15:04:35,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:04:47] 2025-06-04 15:04:35,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:04:47] 2025-06-04 15:04:35,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | sum of deviations: -6877796970.000001
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | mean x: 1749047579.5
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | mean y: 2541129.6551724137
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | -- intersect: 198894713088.35236
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | intersect: 198894713088.35236
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | chi2: 0.04885998741287753
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | -- intersect: 198894713088.35236
[2025-06-04 17:04:47] 2025-06-04 15:04:35,494 | INFO     | current memory leak: -113.71 B/s (using 58 data points, chi2=0.05)
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | ..............................
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . Timing measurements:
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . get job = 0 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . initial setup = 1 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . payload setup = 5 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . stage-in = 0 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . payload execution = 3933 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . stage-out = 0 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | . log creation = 0 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,495 | INFO     | ..............................
[2025-06-04 17:04:47] 2025-06-04 15:04:35,809 | INFO     | 
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | job summary report
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | --------------------------------------------------
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | PanDA job id: 6678153397
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | task id: 45006595
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | errors: (none)
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | pilot state: finished 
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | transexitcode: 0
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | exeerrorcode: 0
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | exeerrordiag: 
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | exitcode: 0
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | exitmsg: OK
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | cpuconsumptiontime: 14889 s
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | nevents: 400
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | neventsw: 0
[2025-06-04 17:04:47] 2025-06-04 15:04:35,810 | INFO     | pid: 3700323
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | pgrp: 3700323
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | corecount: 4
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | event service: False
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | sizes: {0: 2397345, 3: 2397551, 10: 2397579, 3942: 2423430, 3944: 2432377, 3946: 2432433, 3949: 2432731}
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | --------------------------------------------------
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | 
[2025-06-04 17:04:47] 2025-06-04 15:04:35,811 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 17:04:47] 2025-06-04 15:04:35,831 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:04:47] 2025-06-04 15:04:35,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,833 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:04:47] 2025-06-04 15:04:35,833 | INFO     | job 6678153397 has completed (purged errors)
[2025-06-04 17:04:47] 2025-06-04 15:04:35,833 | INFO     | overall cleanup function is called
[2025-06-04 17:04:47] 2025-06-04 15:04:36,839 | INFO     | --- collectZombieJob: --- 10, [3700323]
[2025-06-04 17:04:47] 2025-06-04 15:04:36,840 | INFO     | zombie collector waiting for pid 3700323
[2025-06-04 17:04:47] 2025-06-04 15:04:36,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:04:47] 2025-06-04 15:04:36,840 | INFO     | collected zombie processes
[2025-06-04 17:04:47] 2025-06-04 15:04:36,840 | INFO     | will attempt to kill all subprocesses of pid=3700323
[2025-06-04 17:04:47] 2025-06-04 15:04:36,886 | INFO     | process IDs to be killed: [3700323] (in reverse order)
[2025-06-04 17:04:47] 2025-06-04 15:04:36,920 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:04:47] 2025-06-04 15:04:36,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:04:47] 2025-06-04 15:04:36,923 | INFO     | did not find any defunct processes belonging to 3700323
[2025-06-04 17:04:47] 2025-06-04 15:04:36,924 | INFO     | did not find any defunct processes belonging to 3700323
[2025-06-04 17:04:47] 2025-06-04 15:04:36,924 | INFO     | ready for new job
[2025-06-04 17:04:47] 2025-06-04 15:04:36,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:04:47] 2025-06-04 15:04:36,925 | INFO     | **************************************
[2025-06-04 17:04:47] 2025-06-04 15:04:36,925 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:04:47] 2025-06-04 15:04:36,925 | INFO     | **************************************
[2025-06-04 17:04:47] 2025-06-04 15:04:36,925 | INFO     | 
[2025-06-04 17:04:47] 2025-06-04 15:04:36,925 | INFO     | architecture information:
[2025-06-04 17:04:47] 2025-06-04 15:04:36,926 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:04:47] 2025-06-04 15:04:36,941 | INFO     | cat /etc/os-release:
[2025-06-04 17:04:47] NAME="CentOS Linux"
[2025-06-04 17:04:47] VERSION="7 (Core)"
[2025-06-04 17:04:47] ID="centos"
[2025-06-04 17:04:47] ID_LIKE="rhel fedora"
[2025-06-04 17:04:47] VERSION_ID="7"
[2025-06-04 17:04:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:04:47] ANSI_COLOR="0;31"
[2025-06-04 17:04:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:04:47] HOME_URL="https://www.centos.org/"
[2025-06-04 17:04:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:04:47] 
[2025-06-04 17:04:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:04:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:04:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:04:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:04:47] 
[2025-06-04 17:04:47] 2025-06-04 15:04:36,941 | INFO     | **************************************
[2025-06-04 17:04:47] 2025-06-04 15:04:37,444 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 17:04:47] 2025-06-04 15:04:37,462 | INFO     | sufficient remaining disk space (325341675520 B)
[2025-06-04 17:04:47] 2025-06-04 15:04:37,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:04:47] 2025-06-04 15:04:37,462 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:04:47] 2025-06-04 15:04:37,462 | INFO     | update_server=False
[2025-06-04 17:04:47] 2025-06-04 15:04:37,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:04:47] 2025-06-04 15:04:37,462 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:04:47] 2025-06-04 15:04:37,463 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:04:47] 2025-06-04 15:04:37,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:04:47] 2025-06-04 15:04:37,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:04:47] 2025-06-04 15:04:37,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:04:47] 2025-06-04 15:04:37,495 | INFO     | all job control threads have been joined
[2025-06-04 17:04:47] 2025-06-04 15:04:37,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:04:47] 2025-06-04 15:04:38,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:04:47] 2025-06-04 15:04:38,261 | INFO     | all data control threads have been joined
[2025-06-04 17:04:47] 2025-06-04 15:04:38,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:04:47] 2025-06-04 15:04:38,430 | INFO     | aborting loop
[2025-06-04 17:04:47] 2025-06-04 15:04:38,468 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,468 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,479 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,489 | INFO     | [job] validate thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,501 | INFO     | [job] control thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,588 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,610 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:38,665 | INFO     | all payload control threads have been joined
[2025-06-04 17:04:47] 2025-06-04 15:04:38,722 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:39,038 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:39,221 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:39,267 | INFO     | [data] control thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:39,296 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:39,436 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:39,671 | INFO     | [payload] control thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:40,179 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:41,979 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:04:47] 2025-06-04 15:04:42,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032839587648)>', '<ExcThread(monitor, started 140031729575680)>']
[2025-06-04 17:04:47] 2025-06-04 15:04:43,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:04:47] 2025-06-04 15:04:43,495 | INFO     | [monitor] control thread has ended
[2025-06-04 17:04:47] 2025-06-04 15:04:47,628 | INFO     | all workflow threads have been joined
[2025-06-04 17:04:47] 2025-06-04 15:04:47,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:04:47] 2025-06-04 15:04:47,629 | INFO     | traces error code: 0
[2025-06-04 17:04:47] 2025-06-04 15:04:47,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:04:47] 2025-06-04 15:04:47,709 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:04:47] 2025-06-04 15:04:47,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:04:47] 2025-06-04 15:04:47,717 [wrapper] pilotpid: 3693701
[2025-06-04 17:04:47] 2025-06-04 15:04:47,721 [wrapper] Pilot exit status: 0
[2025-06-04 17:04:47] 2025-06-04 15:04:47,734 [wrapper] pandaids: 6678153397
[2025-06-04 17:04:47] 2025-06-04 15:04:47,757 [wrapper] cleanup supervisor_pilot 3710050 3693702
[2025-06-04 17:04:47] 2025-06-04 15:04:47,761 [wrapper] Test setup, not cleaning
[2025-06-04 17:04:47] 2025-06-04 15:04:47,765 [wrapper] apfmon messages muted
[2025-06-04 17:04:47] 2025-06-04 15:04:47,769 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:04:47] 2025-06-04 15:04:47,773 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:04:47]  *** Error codes and diagnostics ***
[2025-06-04 17:04:47]     "exeErrorCode": 0,
[2025-06-04 17:04:47]     "exeErrorDiag": "",
[2025-06-04 17:04:47]     "pilotErrorCode": 0,
[2025-06-04 17:04:47]     "pilotErrorDiag": "",
[2025-06-04 17:04:47]  *** Listing of results directory ***
[2025-06-04 17:04:47] total 394136
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:42 queuedata.json
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 17:04:47] -rwx------ 1 boinc boinc     37140 Jun  4 00:42 runpilot2-wrapper.sh
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:04:47] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:58 run_atlas
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:58 job.xml
[2025-06-04 17:04:47] -rw-r--r-- 2 boinc boinc 214601026 Jun  4 15:58 EVNT.45006593._001902.pool.root.1
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc      6863 Jun  4 15:58 init_data.xml
[2025-06-04 17:04:47] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:58 shared
[2025-06-04 17:04:47] -rw-r--r-- 2 boinc boinc    508878 Jun  4 15:58 input.tar.gz
[2025-06-04 17:04:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:58 start_atlas.sh
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:58 boinc_lockfile
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc      2525 Jun  4 15:58 pandaJob.out
[2025-06-04 17:04:47] -rw------- 1 boinc boinc    986819 Jun  4 15:58 agis_schedconf.cvmfs.json
[2025-06-04 17:04:47] -rw------- 1 boinc boinc   1598969 Jun  4 15:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:04:47] drwx------ 4 boinc boinc      4096 Jun  4 15:58 pilot3
[2025-06-04 17:04:47] -rw------- 1 boinc boinc        95 Jun  4 17:03 pilot_heartbeat.json
[2025-06-04 17:04:47] -rw------- 1 boinc boinc 183911168 Jun  4 17:04 HITS.45006595._047415.pool.root.1
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:04 boinc_task_state.xml
[2025-06-04 17:04:47] -rw------- 1 boinc boinc      1026 Jun  4 17:04 memory_monitor_summary.json
[2025-06-04 17:04:47] -rw------- 1 boinc boinc    229235 Jun  4 17:04 log.45006595._047415.job.log.tgz.1
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:04 boinc_mmap_file
[2025-06-04 17:04:47] -rw------- 1 boinc boinc      7674 Jun  4 17:04 heartbeat.json
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:04 wrapper_checkpoint.txt
[2025-06-04 17:04:47] -rw------- 1 boinc boinc      4480 Jun  4 17:04 pilotlog.txt
[2025-06-04 17:04:47] -rw------- 1 boinc boinc    396157 Jun  4 17:04 log.45006595._047415.job.log.1
[2025-06-04 17:04:47] -rw------- 1 boinc boinc       357 Jun  4 17:04 output.list
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:04 runtime_log
[2025-06-04 17:04:47] -rw------- 1 boinc boinc    645120 Jun  4 17:04 result.tar.gz
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc      8753 Jun  4 17:04 runtime_log.err
[2025-06-04 17:04:47] -rw------- 1 boinc boinc       662 Jun  4 17:04 9nJMDmIWpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtQmKDm2PN4Mn.diag
[2025-06-04 17:04:47] -rw-r--r-- 1 boinc boinc     21327 Jun  4 17:04 stderr.txt
[2025-06-04 17:04:47] HITS file was successfully produced:
[2025-06-04 17:04:47] -rw------- 1 boinc boinc 183911168 Jun  4 17:04 shared/HITS.pool.root.1
[2025-06-04 17:04:47]  *** Contents of shared directory: ***
[2025-06-04 17:04:47] total 390332
[2025-06-04 17:04:47] -rw-r--r-- 2 boinc boinc 214601026 Jun  4 15:58 ATLAS.root_0
[2025-06-04 17:04:47] -rw-r--r-- 2 boinc boinc    508878 Jun  4 15:58 input.tar.gz
[2025-06-04 17:04:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:58 start_atlas.sh
[2025-06-04 17:04:47] -rw------- 1 boinc boinc 183911168 Jun  4 17:04 HITS.pool.root.1
[2025-06-04 17:04:47] -rw------- 1 boinc boinc    645120 Jun  4 17:04 result.tar.gz
17:04:49 (3690006): run_atlas exited; CPU time 14894.236681
17:04:49 (3690006): called boinc_finish(0)

</stderr_txt>
]]>

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