Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:47:46 (8771): wrapper (7.7.26015): starting
01:47:46 (8771): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:47:46] Arguments: --nthreads 8
[2025-06-04 01:47:46] Threads: 8
[2025-06-04 01:47:46] Checking for CVMFS
[2025-06-04 01:47:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:47:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:47:47] 2.11.2.0 2944 35211 93524 146769 1 56 13329783 20275200 1 130560 0 12176372 99.958 7400676 8271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:47:47] CVMFS is ok
[2025-06-04 01:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:47:47] Further information can be found at the LHC@home message board.
[2025-06-04 01:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:47:47] Checking for apptainer binary...
[2025-06-04 01:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:47:47] Running /usr/bin/apptainer --version
[2025-06-04 01:47:47] apptainer version 1.3.2-1.el7
[2025-06-04 01:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:47:48] c-204-38.aglt2.org
[2025-06-04 01:47:48] apptainer works
[2025-06-04 01:47:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:47:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:47:48] Starting ATLAS job with PandaID=6678153456
[2025-06-04 01:47:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:41:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:41:33] 2025-06-04 07:41:07,109 | INFO     | PID=12367 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 03:41:33] 2025-06-04 07:41:09,559 | INFO     | monitor loop #502: job 0:6678153456 is in state 'finished'
[2025-06-04 03:41:33] 2025-06-04 07:41:09,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,062 | INFO     | monitor loop #503: job 0:6678153456 is in state 'finished'
[2025-06-04 03:41:33] 2025-06-04 07:41:12,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,699 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 03:41:33] 2025-06-04 07:41:12,700 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678153456/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,701 | INFO     | extracted standard info from prmon json
[2025-06-04 03:41:33] 2025-06-04 07:41:12,701 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:41:33] 2025-06-04 07:41:12,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:41:33] 2025-06-04 07:41:12,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:41:33] 2025-06-04 07:41:12,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:41:33] 2025-06-04 07:41:12,705 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:41:33] 2025-06-04 07:41:12,706 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,706 | INFO     | sum of deviations: 11377307640.000002
[2025-06-04 03:41:33] 2025-06-04 07:41:12,706 | INFO     | mean x: 1749019475.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,706 | INFO     | mean y: 2470999.3333333335
[2025-06-04 03:41:33] 2025-06-04 07:41:12,707 | INFO     | -- intersect: -46924447434.133255
[2025-06-04 03:41:33] 2025-06-04 07:41:12,707 | INFO     | intersect: -46924447434.133255
[2025-06-04 03:41:33] 2025-06-04 07:41:12,707 | INFO     | chi2: 1.5157973564743878
[2025-06-04 03:41:33] 2025-06-04 07:41:12,707 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 03:41:33] 2025-06-04 07:41:12,708 | INFO     | sum of deviations: 10814600696.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,708 | INFO     | mean x: 1749019322.5
[2025-06-04 03:41:33] 2025-06-04 07:41:12,708 | INFO     | mean y: 2469431.433962264
[2025-06-04 03:41:33] 2025-06-04 07:41:12,708 | INFO     | -- intersect: -51218492489.83058
[2025-06-04 03:41:33] 2025-06-04 07:41:12,708 | INFO     | intersect: -51218492489.83058
[2025-06-04 03:41:33] 2025-06-04 07:41:12,708 | INFO     | chi2: 1.5190588341083908
[2025-06-04 03:41:33] 2025-06-04 07:41:12,709 | INFO     | current chi2=1.5190588341083908 (change=-0.21516580828382534 %)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,709 | INFO     | right removable region: 105
[2025-06-04 03:41:33] 2025-06-04 07:41:12,709 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 03:41:33] 2025-06-04 07:41:12,709 | INFO     | sum of deviations: -4580551579.5
[2025-06-04 03:41:33] 2025-06-04 07:41:12,710 | INFO     | mean x: 1749019627.5
[2025-06-04 03:41:33] 2025-06-04 07:41:12,710 | INFO     | mean y: 2514463.179245283
[2025-06-04 03:41:33] 2025-06-04 07:41:12,710 | INFO     | -- intersect: 21697286701.290966
[2025-06-04 03:41:33] 2025-06-04 07:41:12,710 | INFO     | intersect: 21697286701.290966
[2025-06-04 03:41:33] 2025-06-04 07:41:12,710 | INFO     | chi2: 0.07442733386519548
[2025-06-04 03:41:33] 2025-06-04 07:41:12,710 | INFO     | current chi2=0.07442733386519548 (change=95.08988892563404 %)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,711 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,711 | INFO     | sum of deviations: -3289567374.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,711 | INFO     | mean x: 1749019780.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,711 | INFO     | mean y: 2510337.8514851485
[2025-06-04 03:41:33] 2025-06-04 07:41:12,711 | INFO     | -- intersect: 18013332463.493145
[2025-06-04 03:41:33] 2025-06-04 07:41:12,712 | INFO     | intersect: 18013332463.493145
[2025-06-04 03:41:33] 2025-06-04 07:41:12,712 | INFO     | chi2: 0.05627449421097365
[2025-06-04 03:41:33] 2025-06-04 07:41:12,712 | INFO     | current chi2=0.05627449421097365 (change=24.39001736526083 %)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,712 | INFO     | left removable region: 20
[2025-06-04 03:41:33] 2025-06-04 07:41:12,712 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | sum of deviations: 862068835.9999996
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | mean x: 1749019902.0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | mean y: 2495134.6705882354
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | -- intersect: -7916345625.815012
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | intersect: -7916345625.815012
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | chi2: 5.426377162981504e-05
[2025-06-04 03:41:33] 2025-06-04 07:41:12,713 | INFO     | -- intersect: -7916345625.815012
[2025-06-04 03:41:33] 2025-06-04 07:41:12,714 | INFO     | current memory leak: 4.53 B/s (using 85 data points, chi2=0.00)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,714 | INFO     | ..............................
[2025-06-04 03:41:33] 2025-06-04 07:41:12,714 | INFO     | . Timing measurements:
[2025-06-04 03:41:33] 2025-06-04 07:41:12,714 | INFO     | . get job = 0 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,714 | INFO     | . initial setup = 2 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,715 | INFO     | . payload setup = 11 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,715 | INFO     | . stage-in = 0 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,715 | INFO     | . payload execution = 6746 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,715 | INFO     | . stage-out = 0 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,715 | INFO     | . log creation = 0 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,715 | INFO     | ..............................
[2025-06-04 03:41:33] 2025-06-04 07:41:12,808 | INFO     | 
[2025-06-04 03:41:33] 2025-06-04 07:41:12,808 | INFO     | job summary report
[2025-06-04 03:41:33] 2025-06-04 07:41:12,809 | INFO     | --------------------------------------------------
[2025-06-04 03:41:33] 2025-06-04 07:41:12,809 | INFO     | PanDA job id: 6678153456
[2025-06-04 03:41:33] 2025-06-04 07:41:12,809 | INFO     | task id: 45006595
[2025-06-04 03:41:33] 2025-06-04 07:41:12,809 | INFO     | errors: (none)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:41:33] 2025-06-04 07:41:12,809 | INFO     | pilot state: finished 
[2025-06-04 03:41:33] 2025-06-04 07:41:12,810 | INFO     | transexitcode: 0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,810 | INFO     | exeerrorcode: 0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,810 | INFO     | exeerrordiag: 
[2025-06-04 03:41:33] 2025-06-04 07:41:12,810 | INFO     | exitcode: 0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,810 | INFO     | exitmsg: OK
[2025-06-04 03:41:33] 2025-06-04 07:41:12,810 | INFO     | cpuconsumptiontime: 49657 s
[2025-06-04 03:41:33] 2025-06-04 07:41:12,811 | INFO     | nevents: 400
[2025-06-04 03:41:33] 2025-06-04 07:41:12,811 | INFO     | neventsw: 0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,811 | INFO     | pid: 18823
[2025-06-04 03:41:33] 2025-06-04 07:41:12,811 | INFO     | pgrp: 18823
[2025-06-04 03:41:33] 2025-06-04 07:41:12,811 | INFO     | corecount: 8
[2025-06-04 03:41:33] 2025-06-04 07:41:12,811 | INFO     | event service: False
[2025-06-04 03:41:33] 2025-06-04 07:41:12,812 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 6761: 2432400, 6762: 2432399, 6764: 2441524, 6765: 2441580, 6772: 2441750}
[2025-06-04 03:41:33] 2025-06-04 07:41:12,812 | INFO     | --------------------------------------------------
[2025-06-04 03:41:33] 2025-06-04 07:41:12,812 | INFO     | 
[2025-06-04 03:41:33] 2025-06-04 07:41:12,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 03:41:33] 2025-06-04 07:41:12,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:41:33] 2025-06-04 07:41:12,845 | INFO     | job 6678153456 has completed (purged errors)
[2025-06-04 03:41:33] 2025-06-04 07:41:12,846 | INFO     | overall cleanup function is called
[2025-06-04 03:41:33] 2025-06-04 07:41:13,853 | INFO     | --- collectZombieJob: --- 10, [18823]
[2025-06-04 03:41:33] 2025-06-04 07:41:13,853 | INFO     | zombie collector waiting for pid 18823
[2025-06-04 03:41:33] 2025-06-04 07:41:13,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:41:33] 2025-06-04 07:41:13,860 | INFO     | collected zombie processes
[2025-06-04 03:41:33] 2025-06-04 07:41:13,860 | INFO     | will attempt to kill all subprocesses of pid=18823
[2025-06-04 03:41:33] 2025-06-04 07:41:13,950 | INFO     | process IDs to be killed: [18823] (in reverse order)
[2025-06-04 03:41:33] 2025-06-04 07:41:14,008 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:41:33] 2025-06-04 07:41:14,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:41:33] 2025-06-04 07:41:14,013 | INFO     | did not find any defunct processes belonging to 18823
[2025-06-04 03:41:33] 2025-06-04 07:41:14,017 | INFO     | did not find any defunct processes belonging to 18823
[2025-06-04 03:41:33] 2025-06-04 07:41:14,017 | INFO     | ready for new job
[2025-06-04 03:41:33] 2025-06-04 07:41:14,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:41:33] 2025-06-04 07:41:14,019 | INFO     | **************************************
[2025-06-04 03:41:33] 2025-06-04 07:41:14,019 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:41:33] 2025-06-04 07:41:14,019 | INFO     | **************************************
[2025-06-04 03:41:33] 2025-06-04 07:41:14,019 | INFO     | 
[2025-06-04 03:41:33] 2025-06-04 07:41:14,020 | INFO     | architecture information:
[2025-06-04 03:41:33] 2025-06-04 07:41:14,020 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:41:33] 2025-06-04 07:41:14,038 | INFO     | cat /etc/os-release:
[2025-06-04 03:41:33] NAME="CentOS Linux"
[2025-06-04 03:41:33] VERSION="7 (Core)"
[2025-06-04 03:41:33] ID="centos"
[2025-06-04 03:41:33] ID_LIKE="rhel fedora"
[2025-06-04 03:41:33] VERSION_ID="7"
[2025-06-04 03:41:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:41:33] ANSI_COLOR="0;31"
[2025-06-04 03:41:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:41:33] HOME_URL="https://www.centos.org/"
[2025-06-04 03:41:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:41:33] 
[2025-06-04 03:41:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:41:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:41:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:41:33] 
[2025-06-04 03:41:33] 2025-06-04 07:41:14,039 | INFO     | **************************************
[2025-06-04 03:41:33] 2025-06-04 07:41:14,542 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 03:41:33] 2025-06-04 07:41:14,561 | INFO     | sufficient remaining disk space (18612224000 B)
[2025-06-04 03:41:33] 2025-06-04 07:41:14,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:41:33] 2025-06-04 07:41:14,562 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:41:33] 2025-06-04 07:41:14,562 | INFO     | update_server=False
[2025-06-04 03:41:33] 2025-06-04 07:41:14,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:41:33] 2025-06-04 07:41:14,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:41:33] 2025-06-04 07:41:14,565 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 03:41:33] 2025-06-04 07:41:14,565 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 03:41:33] 2025-06-04 07:41:14,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:41:33] 2025-06-04 07:41:14,566 | INFO     | will abort loop
[2025-06-04 03:41:33] 2025-06-04 07:41:15,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:41:33] 2025-06-04 07:41:15,048 | INFO     | all payload control threads have been joined
[2025-06-04 03:41:33] 2025-06-04 07:41:15,130 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:41:33] 2025-06-04 07:41:15,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:41:33] 2025-06-04 07:41:15,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:41:33] 2025-06-04 07:41:15,456 | INFO     | all data control threads have been joined
[2025-06-04 03:41:33] 2025-06-04 07:41:15,567 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,568 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,571 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,584 | INFO     | [job] validate thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,589 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,621 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,742 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,908 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:15,983 | INFO     | all job control threads have been joined
[2025-06-04 03:41:33] 2025-06-04 07:41:16,054 | INFO     | [payload] control thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:16,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:41:33] 2025-06-04 07:41:16,342 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:16,462 | INFO     | [data] control thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:16,806 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:16,988 | INFO     | [job] control thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:17,032 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:20,079 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:25,261 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:41:33] 2025-06-04 07:41:26,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:41:33] 2025-06-04 07:41:27,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592023414592)>', '<ExcThread(monitor, started 140591434286848)>']
[2025-06-04 03:41:33] 2025-06-04 07:41:28,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:41:33] 2025-06-04 07:41:28,199 | INFO     | [monitor] control thread has ended
[2025-06-04 03:41:33] 2025-06-04 07:41:32,830 | INFO     | all workflow threads have been joined
[2025-06-04 03:41:33] 2025-06-04 07:41:32,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:41:33] 2025-06-04 07:41:32,831 | INFO     | traces error code: 0
[2025-06-04 03:41:33] 2025-06-04 07:41:32,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:41:33] 2025-06-04 07:41:32,942 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:41:33] 2025-06-04 07:41:32,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:41:33] 2025-06-04 07:41:32,951 [wrapper] pilotpid: 12367
[2025-06-04 03:41:33] 2025-06-04 07:41:32,956 [wrapper] Pilot exit status: 0
[2025-06-04 03:41:33] 2025-06-04 07:41:32,977 [wrapper] pandaids: 6678153456
[2025-06-04 03:41:33] 2025-06-04 07:41:33,025 [wrapper] cleanup supervisor_pilot 28776 12368
[2025-06-04 03:41:33] 2025-06-04 07:41:33,030 [wrapper] Test setup, not cleaning
[2025-06-04 03:41:33] 2025-06-04 07:41:33,036 [wrapper] apfmon messages muted
[2025-06-04 03:41:33] 2025-06-04 07:41:33,040 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:41:33] 2025-06-04 07:41:33,045 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:41:33]  *** Error codes and diagnostics ***
[2025-06-04 03:41:33]     "exeErrorCode": 0,
[2025-06-04 03:41:33]     "exeErrorDiag": "",
[2025-06-04 03:41:33]     "pilotErrorCode": 0,
[2025-06-04 03:41:33]     "pilotErrorDiag": "",
[2025-06-04 03:41:33]  *** Listing of results directory ***
[2025-06-04 03:41:33] total 389220
[2025-06-04 03:41:33] -rwx------ 1 boincer umatlas     37140 Jun  3 18:42 runpilot2-wrapper.sh
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:42 queuedata.json
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:41:33] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:47 run_atlas
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:47 job.xml
[2025-06-04 03:41:33] -rw-r--r-- 2 boincer umatlas 215997541 Jun  4 01:47 EVNT.45006593._001904.pool.root.1
[2025-06-04 03:41:33] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:47 start_atlas.sh
[2025-06-04 03:41:33] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:47 shared
[2025-06-04 03:41:33] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 01:47 input.tar.gz
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:47 boinc_lockfile
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:47 pandaJob.out
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas    986745 Jun  4 01:48 agis_schedconf.cvmfs.json
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas   1603667 Jun  4 01:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:41:33] drwx------ 4 boincer umatlas      4096 Jun  4 01:48 pilot3
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 03:37 init_data.xml
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas 176821691 Jun  4 03:40 HITS.45006595._047474.pool.root.1
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas        95 Jun  4 03:40 pilot_heartbeat.json
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas       529 Jun  4 03:40 boinc_task_state.xml
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas      1049 Jun  4 03:40 memory_monitor_summary.json
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas    328328 Jun  4 03:41 log.45006595._047474.job.log.tgz.1
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas      7747 Jun  4 03:41 heartbeat.json
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 03:41 boinc_mmap_file
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas        27 Jun  4 03:41 wrapper_checkpoint.txt
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas      4611 Jun  4 03:41 pilotlog.txt
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas    623578 Jun  4 03:41 log.45006595._047474.job.log.1
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas       357 Jun  4 03:41 output.list
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas       620 Jun  4 03:41 runtime_log
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas    972800 Jun  4 03:41 result.tar.gz
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas       658 Jun  4 03:41 tJhNDm2Vpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1AaKDmalk16m.diag
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 03:41 runtime_log.err
[2025-06-04 03:41:33] -rw-r--r-- 1 boincer umatlas     21111 Jun  4 03:41 stderr.txt
[2025-06-04 03:41:33] HITS file was successfully produced:
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas 176821691 Jun  4 03:40 shared/HITS.pool.root.1
[2025-06-04 03:41:33]  *** Contents of shared directory: ***
[2025-06-04 03:41:33] total 385088
[2025-06-04 03:41:33] -rw-r--r-- 2 boincer umatlas 215997541 Jun  4 01:47 ATLAS.root_0
[2025-06-04 03:41:33] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:47 start_atlas.sh
[2025-06-04 03:41:33] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 01:47 input.tar.gz
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas 176821691 Jun  4 03:40 HITS.pool.root.1
[2025-06-04 03:41:33] -rw------- 1 boincer umatlas    972800 Jun  4 03:41 result.tar.gz
03:41:34 (8771): run_atlas exited; CPU time 49611.919632
03:41:34 (8771): called boinc_finish(0)

</stderr_txt>
]]>

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