Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:11:59 (1839780): wrapper (7.7.26015): starting
20:11:59 (1839780): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 20:11:59] Arguments: --nthreads 12
[2025-06-05 20:11:59] Threads: 12
[2025-06-05 20:11:59] Checking for CVMFS
[2025-06-05 20:11:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 20:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 20:11:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 20:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 20:11:59] 2.12.7.0 600724 4386 60120 146828 2 15 4069495 4096000 0 130560 0 3445513 99.991 1003216 236 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 20:11:59] CVMFS is ok
[2025-06-05 20:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:11:59] Checking for apptainer binary...
[2025-06-05 20:11:59] apptainer is not installed, using version from CVMFS
[2025-06-05 20:11:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:12:00] lithium
[2025-06-05 20:12:00] apptainer works
[2025-06-05 20:12:00] Set ATHENA_PROC_NUMBER=12
[2025-06-05 20:12:00] Set ATHENA_CORE_NUMBER=12
[2025-06-05 20:12:00] Starting ATLAS job with PandaID=6678218926
[2025-06-05 20:12:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:39:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:39:38] 2025-06-05 19:38:39,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:41,785 | INFO     | monitor loop #394: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:41,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:44,288 | INFO     | monitor loop #395: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:44,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:46,793 | INFO     | monitor loop #396: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:46,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:49,296 | INFO     | monitor loop #397: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:49,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:51,801 | INFO     | monitor loop #398: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:51,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:53,651 | INFO     | 5207s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 21:39:38] 2025-06-05 19:38:54,304 | INFO     | monitor loop #399: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:54,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:56,809 | INFO     | monitor loop #400: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:56,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:38:59,310 | INFO     | monitor loop #401: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:38:59,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:00,778 | INFO     | PID=1843502 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 21:39:38] 2025-06-05 19:39:01,814 | INFO     | monitor loop #402: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:01,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:04,317 | INFO     | monitor loop #403: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:04,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:06,821 | INFO     | monitor loop #404: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:06,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:09,325 | INFO     | monitor loop #405: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:09,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:11,829 | INFO     | monitor loop #406: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:11,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:14,333 | INFO     | monitor loop #407: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:14,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:16,838 | INFO     | monitor loop #408: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:16,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:19,341 | INFO     | monitor loop #409: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:19,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:21,846 | INFO     | monitor loop #410: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:21,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:22,945 | INFO     | PID=1843502 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 21:39:38] 2025-06-05 19:39:24,349 | INFO     | monitor loop #411: job 0:6678218926 is in state 'finished'
[2025-06-05 21:39:38] 2025-06-05 19:39:24,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:39:38] 2025-06-05 19:39:25,349 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 21:39:38] 2025-06-05 19:39:25,349 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678218926/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:39:38] 2025-06-05 19:39:25,349 | INFO     | extracted standard info from prmon json
[2025-06-05 21:39:38] 2025-06-05 19:39:25,350 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:39:38] 2025-06-05 19:39:25,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:39:38] 2025-06-05 19:39:25,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:39:38] 2025-06-05 19:39:25,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:39:38] 2025-06-05 19:39:25,352 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:39:38] 2025-06-05 19:39:25,352 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 21:39:38] 2025-06-05 19:39:25,352 | INFO     | sum of deviations: -3546255069.0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,352 | INFO     | mean x: 1749149804.5
[2025-06-05 21:39:38] 2025-06-05 19:39:25,352 | INFO     | mean y: 2803282.0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,352 | INFO     | -- intersect: 42163340132.529915
[2025-06-05 21:39:38] 2025-06-05 19:39:25,353 | INFO     | intersect: 42163340132.529915
[2025-06-05 21:39:38] 2025-06-05 19:39:25,353 | INFO     | chi2: 0.02492230566818099
[2025-06-05 21:39:38] 2025-06-05 19:39:25,353 | INFO     | -- intersect: 42163340132.529915
[2025-06-05 21:39:38] 2025-06-05 19:39:25,353 | INFO     | current memory leak: -24.10 B/s (using 78 data points, chi2=0.02)
[2025-06-05 21:39:38] 2025-06-05 19:39:25,353 | INFO     | ..............................
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . Timing measurements:
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . get job = 0 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . initial setup = 1 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . payload setup = 5 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . stage-in = 0 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . payload execution = 5132 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . stage-out = 0 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | . log creation = 0 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,354 | INFO     | ..............................
[2025-06-05 21:39:38] 2025-06-05 19:39:25,433 | INFO     | 
[2025-06-05 21:39:38] 2025-06-05 19:39:25,433 | INFO     | job summary report
[2025-06-05 21:39:38] 2025-06-05 19:39:25,433 | INFO     | --------------------------------------------------
[2025-06-05 21:39:38] 2025-06-05 19:39:25,433 | INFO     | PanDA job id: 6678218926
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | task id: 45006595
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | errors: (none)
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | pilot state: finished 
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | transexitcode: 0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | exeerrorcode: 0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | exeerrordiag: 
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | exitcode: 0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | exitmsg: OK
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | cpuconsumptiontime: 56711 s
[2025-06-05 21:39:38] 2025-06-05 19:39:25,434 | INFO     | nevents: 400
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | neventsw: 0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | pid: 1850147
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | pgrp: 1850147
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | corecount: 12
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | event service: False
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | sizes: {0: 2397178, 1: 2397377, 4: 2397583, 11: 2397611, 5142: 2423778, 5143: 2432917, 5224: 2433031}
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | --------------------------------------------------
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | 
[2025-06-05 21:39:38] 2025-06-05 19:39:25,435 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 21:39:38] 2025-06-05 19:39:25,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:39:38] 2025-06-05 19:39:25,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:39:38] 2025-06-05 19:39:25,455 | INFO     | job 6678218926 has completed (purged errors)
[2025-06-05 21:39:38] 2025-06-05 19:39:25,455 | INFO     | overall cleanup function is called
[2025-06-05 21:39:38] 2025-06-05 19:39:26,461 | INFO     | --- collectZombieJob: --- 10, [1850147]
[2025-06-05 21:39:38] 2025-06-05 19:39:26,462 | INFO     | zombie collector waiting for pid 1850147
[2025-06-05 21:39:38] 2025-06-05 19:39:26,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:39:38] 2025-06-05 19:39:26,462 | INFO     | collected zombie processes
[2025-06-05 21:39:38] 2025-06-05 19:39:26,462 | INFO     | will attempt to kill all subprocesses of pid=1850147
[2025-06-05 21:39:38] 2025-06-05 19:39:26,542 | INFO     | process IDs to be killed: [1850147] (in reverse order)
[2025-06-05 21:39:38] 2025-06-05 19:39:26,587 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:39:38] 2025-06-05 19:39:26,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:39:38] 2025-06-05 19:39:26,590 | INFO     | did not find any defunct processes belonging to 1850147
[2025-06-05 21:39:38] 2025-06-05 19:39:26,593 | INFO     | did not find any defunct processes belonging to 1850147
[2025-06-05 21:39:38] 2025-06-05 19:39:26,593 | INFO     | ready for new job
[2025-06-05 21:39:38] 2025-06-05 19:39:26,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:39:38] 2025-06-05 19:39:26,594 | INFO     | **************************************
[2025-06-05 21:39:38] 2025-06-05 19:39:26,594 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:39:38] 2025-06-05 19:39:26,594 | INFO     | **************************************
[2025-06-05 21:39:38] 2025-06-05 19:39:26,595 | INFO     | 
[2025-06-05 21:39:38] 2025-06-05 19:39:26,615 | INFO     | architecture information:
[2025-06-05 21:39:38] 2025-06-05 19:39:26,615 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:39:38] 2025-06-05 19:39:26,626 | INFO     | cat /etc/os-release:
[2025-06-05 21:39:38] NAME="CentOS Linux"
[2025-06-05 21:39:38] VERSION="7 (Core)"
[2025-06-05 21:39:38] ID="centos"
[2025-06-05 21:39:38] ID_LIKE="rhel fedora"
[2025-06-05 21:39:38] VERSION_ID="7"
[2025-06-05 21:39:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:39:38] ANSI_COLOR="0;31"
[2025-06-05 21:39:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:39:38] HOME_URL="https://www.centos.org/"
[2025-06-05 21:39:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:39:38] 
[2025-06-05 21:39:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:39:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:39:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:39:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:39:38] 
[2025-06-05 21:39:38] 2025-06-05 19:39:26,626 | INFO     | **************************************
[2025-06-05 21:39:38] 2025-06-05 19:39:27,130 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 21:39:38] 2025-06-05 19:39:27,142 | INFO     | sufficient remaining disk space (33946599424 B)
[2025-06-05 21:39:38] 2025-06-05 19:39:27,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:39:38] 2025-06-05 19:39:27,142 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:39:38] 2025-06-05 19:39:27,142 | INFO     | update_server=False
[2025-06-05 21:39:38] 2025-06-05 19:39:27,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:39:38] 2025-06-05 19:39:27,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:39:38] 2025-06-05 19:39:27,143 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:39:38] 2025-06-05 19:39:27,143 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:39:38] 2025-06-05 19:39:27,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:39:38] 2025-06-05 19:39:27,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:39:38] 2025-06-05 19:39:27,237 | INFO     | all payload control threads have been joined
[2025-06-05 21:39:38] 2025-06-05 19:39:27,357 | INFO     | all data control threads have been joined
[2025-06-05 21:39:38] 2025-06-05 19:39:27,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:39:38] 2025-06-05 19:39:27,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:39:38] 2025-06-05 19:39:27,683 | INFO     | all job control threads have been joined
[2025-06-05 21:39:38] 2025-06-05 19:39:27,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:39:38] 2025-06-05 19:39:27,857 | INFO     | aborting loop
[2025-06-05 21:39:38] 2025-06-05 19:39:28,148 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,148 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,241 | INFO     | [payload] control thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,361 | INFO     | [data] control thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,571 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,666 | INFO     | [job] validate thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,689 | INFO     | [job] control thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,722 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,853 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,861 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,973 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:28,981 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:29,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:29,442 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:29,633 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:31,677 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:39:38] 2025-06-05 19:39:33,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840098064192)>', '<ExcThread(monitor, started 139839437534976)>']
[2025-06-05 21:39:38] 2025-06-05 19:39:34,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:39:38] 2025-06-05 19:39:34,179 | INFO     | [monitor] control thread has ended
[2025-06-05 21:39:38] 2025-06-05 19:39:38,527 | INFO     | all workflow threads have been joined
[2025-06-05 21:39:38] 2025-06-05 19:39:38,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:39:38] 2025-06-05 19:39:38,527 | INFO     | traces error code: 0
[2025-06-05 21:39:38] 2025-06-05 19:39:38,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:39:38] 2025-06-05 19:39:38,613 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:39:38] 2025-06-05 19:39:38,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:39:38] 2025-06-05 19:39:38,617 [wrapper] pilotpid: 1843502
[2025-06-05 21:39:38] 2025-06-05 19:39:38,620 [wrapper] Pilot exit status: 0
[2025-06-05 21:39:38] 2025-06-05 19:39:38,628 [wrapper] pandaids: 6678218926
[2025-06-05 21:39:38] 2025-06-05 19:39:38,655 [wrapper] cleanup supervisor_pilot 1861875 1843503
[2025-06-05 21:39:38] 2025-06-05 19:39:38,657 [wrapper] Test setup, not cleaning
[2025-06-05 21:39:38] 2025-06-05 19:39:38,659 [wrapper] apfmon messages muted
[2025-06-05 21:39:38] 2025-06-05 19:39:38,661 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:39:38] 2025-06-05 19:39:38,663 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:39:38]  *** Error codes and diagnostics ***
[2025-06-05 21:39:38]     "exeErrorCode": 0,
[2025-06-05 21:39:38]     "exeErrorDiag": "",
[2025-06-05 21:39:38]     "pilotErrorCode": 0,
[2025-06-05 21:39:38]     "pilotErrorDiag": "",
[2025-06-05 21:39:38]  *** Listing of results directory ***
[2025-06-05 21:39:38] total 391548
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:51 queuedata.json
[2025-06-05 21:39:38] -rwx------ 1 boinc boinc     37140 Jun  4 02:51 runpilot2-wrapper.sh
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc       100 Jun  5 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:39:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 20:11 run_atlas
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc       105 Jun  5 20:11 job.xml
[2025-06-05 21:39:38] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:11 start_atlas.sh
[2025-06-05 21:39:38] drwxrwx--x 2 boinc boinc      4096 Jun  5 20:11 shared
[2025-06-05 21:39:38] -rw-r--r-- 2 boinc boinc    508878 Jun  5 20:11 input.tar.gz
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc      6048 Jun  5 20:11 init_data.xml
[2025-06-05 21:39:38] -rw-r--r-- 2 boinc boinc 214588191 Jun  5 20:11 EVNT.45006593._001979.pool.root.1
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc         0 Jun  5 20:11 boinc_lockfile
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc      2525 Jun  5 20:12 pandaJob.out
[2025-06-05 21:39:38] -rw------- 1 boinc boinc    983229 Jun  5 20:12 agis_schedconf.cvmfs.json
[2025-06-05 21:39:38] -rw------- 1 boinc boinc   1598969 Jun  5 20:12 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:39:38] drwx------ 4 boinc boinc      4096 Jun  5 20:12 pilot3
[2025-06-05 21:39:38] -rw------- 1 boinc boinc 180806971 Jun  5 21:37 HITS.45006595._049336.pool.root.1
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc       529 Jun  5 21:37 boinc_task_state.xml
[2025-06-05 21:39:38] -rw------- 1 boinc boinc      1061 Jun  5 21:38 memory_monitor_summary.json
[2025-06-05 21:39:38] -rw------- 1 boinc boinc    362784 Jun  5 21:38 log.45006595._049336.job.log.tgz.1
[2025-06-05 21:39:38] -rw------- 1 boinc boinc        95 Jun  5 21:38 pilot_heartbeat.json
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc      8192 Jun  5 21:39 boinc_mmap_file
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc        27 Jun  5 21:39 wrapper_checkpoint.txt
[2025-06-05 21:39:38] -rw------- 1 boinc boinc      7731 Jun  5 21:39 heartbeat.json
[2025-06-05 21:39:38] -rw------- 1 boinc boinc      4483 Jun  5 21:39 pilotlog.txt
[2025-06-05 21:39:38] -rw------- 1 boinc boinc    494795 Jun  5 21:39 log.45006595._049336.job.log.1
[2025-06-05 21:39:38] -rw------- 1 boinc boinc       357 Jun  5 21:39 output.list
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc       620 Jun  5 21:39 runtime_log
[2025-06-05 21:39:38] -rw------- 1 boinc boinc    880640 Jun  5 21:39 result.tar.gz
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc      8716 Jun  5 21:39 runtime_log.err
[2025-06-05 21:39:38] -rw------- 1 boinc boinc       654 Jun  5 21:39 FNeLDmSXrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0PaKDmShWvLo.diag
[2025-06-05 21:39:38] -rw-r--r-- 1 boinc boinc     22240 Jun  5 21:39 stderr.txt
[2025-06-05 21:39:38] HITS file was successfully produced:
[2025-06-05 21:39:38] -rw------- 1 boinc boinc 180806971 Jun  5 21:37 shared/HITS.pool.root.1
[2025-06-05 21:39:38]  *** Contents of shared directory: ***
[2025-06-05 21:39:38] total 387516
[2025-06-05 21:39:38] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:11 start_atlas.sh
[2025-06-05 21:39:38] -rw-r--r-- 2 boinc boinc    508878 Jun  5 20:11 input.tar.gz
[2025-06-05 21:39:38] -rw-r--r-- 2 boinc boinc 214588191 Jun  5 20:11 ATLAS.root_0
[2025-06-05 21:39:38] -rw------- 1 boinc boinc 180806971 Jun  5 21:37 HITS.pool.root.1
[2025-06-05 21:39:38] -rw------- 1 boinc boinc    880640 Jun  5 21:39 result.tar.gz
21:39:40 (1839780): run_atlas exited; CPU time 56637.182347
21:39:40 (1839780): called boinc_finish(0)

</stderr_txt>
]]>

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