Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:47:09 (490399): wrapper (7.7.26015): starting
01:47:09 (490399): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:47:09] Arguments: --nthreads 8
[2025-06-04 01:47:09] Threads: 8
[2025-06-04 01:47:09] Checking for CVMFS
[2025-06-04 01:47:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:47:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:47:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:47:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:47:10] 2.12.6.0 4082173 23363 310708 146769 3 362 26755925 40960001 29775 16776704 1 321538393 99.792 171120822 27398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 01:47:10] CVMFS is ok
[2025-06-04 01:47:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:47:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:47:10] Further information can be found at the LHC@home message board.
[2025-06-04 01:47:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:47:10] Checking for apptainer binary...
[2025-06-04 01:47:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:47:10] Running /usr/bin/apptainer --version
[2025-06-04 01:47:10] apptainer version 1.4.1-1.el9
[2025-06-04 01:47:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:47:10] c8-7-6.aglt2.org
[2025-06-04 01:47:10] apptainer works
[2025-06-04 01:47:10] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:47:10] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:47:10] Starting ATLAS job with PandaID=6678218898
[2025-06-04 01:47:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:35:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:35:58]  is_tar=False
[2025-06-04 02:35:58]  lfn=log.45006595._049308.job.log.tgz.1
[2025-06-04 02:35:58]  mtime=0
[2025-06-04 02:35:58]  protocol_id=None
[2025-06-04 02:35:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:35:58]  replicas=None
[2025-06-04 02:35:58]  scope=mc23_13p6TeV
[2025-06-04 02:35:58]  status=None
[2025-06-04 02:35:58]  status_code=0
[2025-06-04 02:35:58]  storage_token=
[2025-06-04 02:35:58]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678218898/log.45006595._049308.job.log.tgz.1
[2025-06-04 02:35:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/b4/log.45006595._049308.job.log.tgz.1
[2025-06-04 02:35:58]  workdir=None
[2025-06-04 02:35:58] ]
[2025-06-04 02:35:58] 2025-06-04 06:35:29,609 | INFO     | transferring file log.45006595._049308.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678218898/log.45006595._049308.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:35:58] 2025-06-04 06:35:29,609 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678218898/log.45006595._049308.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._049308.job
[2025-06-04 02:35:58] 2025-06-04 06:35:29,628 | INFO     | adding to output.list: log.45006595._049308.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/b4/log.45006595._049308.job.log.tg
[2025-06-04 02:35:58] 2025-06-04 06:35:29,628 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:35:58] 2025-06-04 06:35:29,628 | INFO     | summary of transferred files:
[2025-06-04 02:35:58] 2025-06-04 06:35:29,628 | INFO     |  -- lfn=log.45006595._049308.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:35:58] 2025-06-04 06:35:29,629 | INFO     | stage-out finished correctly
[2025-06-04 02:35:58] 2025-06-04 06:35:32,952 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:35:58] 2025-06-04 06:35:34,183 | INFO     | job 6678218898 has state=finished
[2025-06-04 02:35:58] 2025-06-04 06:35:34,183 | INFO     | preparing for final server update for job 6678218898 in state='finished'
[2025-06-04 02:35:58] 2025-06-04 06:35:34,184 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:35:58] 2025-06-04 06:35:34,184 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:35:58] 2025-06-04 06:35:34,184 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:35:58] 2025-06-04 06:35:34,184 | INFO     | job 6678218898 has finished - writing final server update
[2025-06-04 02:35:58] 2025-06-04 06:35:34,184 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:35:58] 2025-06-04 06:35:34,202 | INFO     | executing command: lscpu
[2025-06-04 02:35:58] 2025-06-04 06:35:34,288 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:35:58] 2025-06-04 06:35:37,878 | WARNING  | process 501964 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:35:58] 2025-06-04 06:35:37,880 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678218898/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:35:58] 2025-06-04 06:35:38,146 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 02:35:58] 2025-06-04 06:35:38,147 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678218898/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:35:58] 2025-06-04 06:35:38,147 | INFO     | extracted standard info from prmon json
[2025-06-04 02:35:58] 2025-06-04 06:35:38,147 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:35:58] 2025-06-04 06:35:38,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:35:58] 2025-06-04 06:35:38,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:35:58] 2025-06-04 06:35:38,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:35:58] 2025-06-04 06:35:38,149 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:35:58] 2025-06-04 06:35:38,149 | INFO     | sum of square deviations: 19832930.0
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | sum of deviations: 2577470027.0
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | mean x: 1749017559.5
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | mean y: 2447930.95
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | -- intersect: -227298325898.6324
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | intersect: -227298325898.6324
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | chi2: 0.5145226426583026
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | -- intersect: -227298325898.6324
[2025-06-04 02:35:58] 2025-06-04 06:35:38,150 | INFO     | current memory leak: 129.96 B/s (using 40 data points, chi2=0.51)
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | ..............................
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . Timing measurements:
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . get job = 0 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . initial setup = 2 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . payload setup = 5 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . stage-in = 0 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . payload execution = 2867 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . stage-out = 0 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | . log creation = 0 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,151 | INFO     | ..............................
[2025-06-04 02:35:58] 2025-06-04 06:35:38,220 | INFO     | 
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | job summary report
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | --------------------------------------------------
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | PanDA job id: 6678218898
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | task id: 45006595
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | errors: (none)
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | pilot state: finished 
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | transexitcode: 0
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | exeerrorcode: 0
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | exeerrordiag: 
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | exitcode: 0
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | exitmsg: OK
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | cpuconsumptiontime: 18306 s
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | nevents: 400
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | neventsw: 0
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | pid: 501964
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | pgrp: 501964
[2025-06-04 02:35:58] 2025-06-04 06:35:38,221 | INFO     | corecount: 8
[2025-06-04 02:35:58] 2025-06-04 06:35:38,222 | INFO     | event service: False
[2025-06-04 02:35:58] 2025-06-04 06:35:38,222 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 2873: 2430722, 2874: 2430721, 2875: 2439718, 2878: 2439902, 2883: 2440072}
[2025-06-04 02:35:58] 2025-06-04 06:35:38,222 | INFO     | --------------------------------------------------
[2025-06-04 02:35:58] 2025-06-04 06:35:38,222 | INFO     | 
[2025-06-04 02:35:58] 2025-06-04 06:35:38,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 02:35:58] 2025-06-04 06:35:38,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:35:58] 2025-06-04 06:35:38,244 | INFO     | job 6678218898 has completed (purged errors)
[2025-06-04 02:35:58] 2025-06-04 06:35:38,245 | INFO     | overall cleanup function is called
[2025-06-04 02:35:58] 2025-06-04 06:35:38,403 | INFO     | number of running child processes to parent process 501964: 1
[2025-06-04 02:35:58] 2025-06-04 06:35:38,403 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:35:58] 2025-06-04 06:35:38,403 | INFO     | aborting job monitoring since job object (job id=6678218898) has expired
[2025-06-04 02:35:58] 2025-06-04 06:35:39,253 | INFO     | --- collectZombieJob: --- 10, [501964]
[2025-06-04 02:35:58] 2025-06-04 06:35:39,253 | INFO     | zombie collector waiting for pid 501964
[2025-06-04 02:35:58] 2025-06-04 06:35:39,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:35:58] 2025-06-04 06:35:39,253 | INFO     | collected zombie processes
[2025-06-04 02:35:58] 2025-06-04 06:35:39,253 | INFO     | will attempt to kill all subprocesses of pid=501964
[2025-06-04 02:35:58] 2025-06-04 06:35:39,313 | INFO     | PID=494911 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 02:35:58] 2025-06-04 06:35:39,313 | INFO     | .. there are 44 such processes running
[2025-06-04 02:35:58] 2025-06-04 06:35:39,695 | INFO     | process IDs to be killed: [501964] (in reverse order)
[2025-06-04 02:35:58] 2025-06-04 06:35:39,853 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:35:58] 2025-06-04 06:35:39,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:35:58] 2025-06-04 06:35:39,878 | INFO     | did not find any defunct processes belonging to 501964
[2025-06-04 02:35:58] 2025-06-04 06:35:39,902 | INFO     | did not find any defunct processes belonging to 501964
[2025-06-04 02:35:58] 2025-06-04 06:35:39,903 | INFO     | ready for new job
[2025-06-04 02:35:58] 2025-06-04 06:35:39,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:35:58] 2025-06-04 06:35:39,904 | INFO     | **************************************
[2025-06-04 02:35:58] 2025-06-04 06:35:39,904 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:35:58] 2025-06-04 06:35:39,904 | INFO     | **************************************
[2025-06-04 02:35:58] 2025-06-04 06:35:39,904 | INFO     | 
[2025-06-04 02:35:58] 2025-06-04 06:35:39,920 | INFO     | architecture information:
[2025-06-04 02:35:58] 2025-06-04 06:35:39,920 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:35:58] 2025-06-04 06:35:39,935 | INFO     | cat /etc/os-release:
[2025-06-04 02:35:58] NAME="CentOS Linux"
[2025-06-04 02:35:58] VERSION="7 (Core)"
[2025-06-04 02:35:58] ID="centos"
[2025-06-04 02:35:58] ID_LIKE="rhel fedora"
[2025-06-04 02:35:58] VERSION_ID="7"
[2025-06-04 02:35:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:35:58] ANSI_COLOR="0;31"
[2025-06-04 02:35:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:35:58] HOME_URL="https://www.centos.org/"
[2025-06-04 02:35:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:35:58] 
[2025-06-04 02:35:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:35:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:35:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:35:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:35:58] 
[2025-06-04 02:35:58] 2025-06-04 06:35:39,936 | INFO     | **************************************
[2025-06-04 02:35:58] 2025-06-04 06:35:40,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 02:35:58] 2025-06-04 06:35:40,455 | INFO     | sufficient remaining disk space (172058738688 B)
[2025-06-04 02:35:58] 2025-06-04 06:35:40,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:35:58] 2025-06-04 06:35:40,455 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:35:58] 2025-06-04 06:35:40,455 | INFO     | update_server=False
[2025-06-04 02:35:58] 2025-06-04 06:35:40,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:35:58] 2025-06-04 06:35:40,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:35:58] 2025-06-04 06:35:40,911 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 02:35:58] 2025-06-04 06:35:40,911 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 02:35:58] 2025-06-04 06:35:40,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:35:58] 2025-06-04 06:35:40,911 | INFO     | will abort loop
[2025-06-04 02:35:58] 2025-06-04 06:35:41,012 | INFO     | all data control threads have been joined
[2025-06-04 02:35:58] 2025-06-04 06:35:41,315 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:35:58] 2025-06-04 06:35:41,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:35:58] 2025-06-04 06:35:41,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:35:58] 2025-06-04 06:35:41,434 | INFO     | all payload control threads have been joined
[2025-06-04 02:35:58] 2025-06-04 06:35:41,461 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:41,634 | INFO     | all job control threads have been joined
[2025-06-04 02:35:58] 2025-06-04 06:35:41,833 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:41,916 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,018 | INFO     | [data] control thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,108 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,294 | INFO     | [job] validate thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,348 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,407 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,437 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,440 | INFO     | [payload] control thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,461 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,640 | INFO     | [job] control thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:42,799 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:43,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:35:58] 2025-06-04 06:35:43,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:35:58] 2025-06-04 06:35:44,222 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:47,515 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:50,963 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:35:58] 2025-06-04 06:35:51,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:35:58] 2025-06-04 06:35:53,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686421366592)>', '<ExcThread(monitor, started 140685923567360)>']
[2025-06-04 02:35:58] 2025-06-04 06:35:53,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:35:58] 2025-06-04 06:35:53,370 | INFO     | [monitor] control thread has ended
[2025-06-04 02:35:58] 2025-06-04 06:35:58,269 | INFO     | all workflow threads have been joined
[2025-06-04 02:35:58] 2025-06-04 06:35:58,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:35:58] 2025-06-04 06:35:58,270 | INFO     | traces error code: 0
[2025-06-04 02:35:58] 2025-06-04 06:35:58,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:35:58] 2025-06-04 06:35:58,509 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:35:58] 2025-06-04 06:35:58,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:35:58] 2025-06-04 06:35:58,515 [wrapper] pilotpid: 494911
[2025-06-04 02:35:58] 2025-06-04 06:35:58,517 [wrapper] Pilot exit status: 0
[2025-06-04 02:35:58] 2025-06-04 06:35:58,538 [wrapper] pandaids: 6678218898
[2025-06-04 02:35:58] 2025-06-04 06:35:58,659 [wrapper] cleanup supervisor_pilot 1054654 494912
[2025-06-04 02:35:58] 2025-06-04 06:35:58,661 [wrapper] Test setup, not cleaning
[2025-06-04 02:35:58] 2025-06-04 06:35:58,665 [wrapper] apfmon messages muted
[2025-06-04 02:35:58] 2025-06-04 06:35:58,668 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:35:58] 2025-06-04 06:35:58,670 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:35:58]  *** Error codes and diagnostics ***
[2025-06-04 02:35:58]     "exeErrorCode": 0,
[2025-06-04 02:35:58]     "exeErrorDiag": "",
[2025-06-04 02:35:58]     "pilotErrorCode": 0,
[2025-06-04 02:35:58]     "pilotErrorDiag": "",
[2025-06-04 02:35:58]  *** Listing of results directory ***
[2025-06-04 02:35:58] total 392072
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 20:48 queuedata.json
[2025-06-04 02:35:58] -rwx------. 1 boincer umatlas     37140 Jun  3 20:49 runpilot2-wrapper.sh
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas       100 Jun  4 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:35:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 01:47 run_atlas
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas       105 Jun  4 01:47 job.xml
[2025-06-04 02:35:58] -rw-r--r--. 2 boincer umatlas 216707695 Jun  4 01:47 EVNT.45006593._001978.pool.root.1
[2025-06-04 02:35:58] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 01:47 input.tar.gz
[2025-06-04 02:35:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:47 start_atlas.sh
[2025-06-04 02:35:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 01:47 shared
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas         0 Jun  4 01:47 boinc_lockfile
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 01:47 pandaJob.out
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas    986745 Jun  4 01:47 agis_schedconf.cvmfs.json
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:35:58] drwx------. 4 boincer umatlas      4096 Jun  4 01:47 pilot3
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 02:27 init_data.xml
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas 179786952 Jun  4 02:35 HITS.45006595._049308.pool.root.1
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas       530 Jun  4 02:35 boinc_task_state.xml
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas        95 Jun  4 02:35 pilot_heartbeat.json
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas      1031 Jun  4 02:35 memory_monitor_summary.json
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas    272947 Jun  4 02:35 log.45006595._049308.job.log.tgz.1
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas      7686 Jun  4 02:35 heartbeat.json
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:35 boinc_mmap_file
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:35 wrapper_checkpoint.txt
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas      4612 Jun  4 02:35 pilotlog.txt
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas    306662 Jun  4 02:35 log.45006595._049308.job.log.1
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas       357 Jun  4 02:35 output.list
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:35 runtime_log
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas    593920 Jun  4 02:35 result.tar.gz
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas       650 Jun  4 02:35 xRqMDmRVrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoPaKDmsLc8Km.diag
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 02:35 runtime_log.err
[2025-06-04 02:35:58] -rw-r--r--. 1 boincer umatlas     21525 Jun  4 02:35 stderr.txt
[2025-06-04 02:35:58] HITS file was successfully produced:
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas 179786952 Jun  4 02:35 shared/HITS.pool.root.1
[2025-06-04 02:35:58]  *** Contents of shared directory: ***
[2025-06-04 02:35:58] total 388308
[2025-06-04 02:35:58] -rw-r--r--. 2 boincer umatlas 216707695 Jun  4 01:47 ATLAS.root_0
[2025-06-04 02:35:58] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 01:47 input.tar.gz
[2025-06-04 02:35:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:47 start_atlas.sh
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas 179786952 Jun  4 02:35 HITS.pool.root.1
[2025-06-04 02:35:58] -rw-------. 1 boincer umatlas    593920 Jun  4 02:35 result.tar.gz
02:36:00 (490399): run_atlas exited; CPU time 18357.413186
02:36:00 (490399): called boinc_finish(0)

</stderr_txt>
]]>

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