Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:49:52 (12793): wrapper (7.7.26015): starting
18:49:52 (12793): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:49:52] Arguments: --nthreads 8
[2025-06-04 18:49:52] Threads: 8
[2025-06-04 18:49:52] Checking for CVMFS
[2025-06-04 18:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:49:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:49:54] 2.11.2.0 22385 33651 89036 146788 0 16 17094193 25165824 4296 130560 0 19290753 99.805 20448776 2330 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:49:54] CVMFS is ok
[2025-06-04 18:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:49:54] Checking for apptainer binary...
[2025-06-04 18:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:49:54] Running /usr/bin/apptainer --version
[2025-06-04 18:49:54] apptainer version 1.3.2-1.el7
[2025-06-04 18:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:50:00] cg-vwn497.simple-grid.lan
[2025-06-04 18:50:00] apptainer works
[2025-06-04 18:50:00] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:50:00] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:50:00] Starting ATLAS job with PandaID=6678244376
[2025-06-04 18:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:15:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:15:18] 2025-06-04 20:15:03,934 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:15:18] 2025-06-04 20:15:03,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:15:18] 2025-06-04 20:15:03,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:15:18] 2025-06-04 20:15:03,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:15:18] 2025-06-04 20:15:03,939 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:15:18] 2025-06-04 20:15:03,940 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,941 | INFO     | sum of deviations: 79412043458.00002
[2025-06-04 22:15:18] 2025-06-04 20:15:03,941 | INFO     | mean x: 1749062269.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,942 | INFO     | mean y: 2392305.664921466
[2025-06-04 22:15:18] 2025-06-04 20:15:03,942 | INFO     | -- intersect: -64284883374.20471
[2025-06-04 22:15:18] 2025-06-04 20:15:03,942 | INFO     | intersect: -64284883374.20471
[2025-06-04 22:15:18] 2025-06-04 20:15:03,942 | INFO     | chi2: 6.357539377070051
[2025-06-04 22:15:18] 2025-06-04 20:15:03,943 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 22:15:18] 2025-06-04 20:15:03,944 | INFO     | sum of deviations: 89405238497.5
[2025-06-04 22:15:18] 2025-06-04 20:15:03,944 | INFO     | mean x: 1749062116.5
[2025-06-04 22:15:18] 2025-06-04 20:15:03,944 | INFO     | mean y: 2401279.14516129
[2025-06-04 22:15:18] 2025-06-04 20:15:03,944 | INFO     | -- intersect: -78370061862.18736
[2025-06-04 22:15:18] 2025-06-04 20:15:03,944 | INFO     | intersect: -78370061862.18736
[2025-06-04 22:15:18] 2025-06-04 20:15:03,945 | INFO     | chi2: 5.643551212246526
[2025-06-04 22:15:18] 2025-06-04 20:15:03,945 | INFO     | current chi2=5.643551212246526 (change=11.230574007904536 %)
[2025-06-04 22:15:18] 2025-06-04 20:15:03,945 | INFO     | right removable region: 185
[2025-06-04 22:15:18] 2025-06-04 20:15:03,945 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 22:15:18] 2025-06-04 20:15:03,947 | INFO     | sum of deviations: 15303619335.500002
[2025-06-04 22:15:18] 2025-06-04 20:15:03,947 | INFO     | mean x: 1749062421.5
[2025-06-04 22:15:18] 2025-06-04 20:15:03,947 | INFO     | mean y: 2451389.704301075
[2025-06-04 22:15:18] 2025-06-04 20:15:03,947 | INFO     | -- intersect: -13412674743.88677
[2025-06-04 22:15:18] 2025-06-04 20:15:03,947 | INFO     | intersect: -13412674743.88677
[2025-06-04 22:15:18] 2025-06-04 20:15:03,947 | INFO     | chi2: 1.6603190275288
[2025-06-04 22:15:18] 2025-06-04 20:15:03,948 | INFO     | current chi2=1.6603190275288 (change=73.88425098054245 %)
[2025-06-04 22:15:18] 2025-06-04 20:15:03,948 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,949 | INFO     | sum of deviations: -8851821996.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,949 | INFO     | mean x: 1749062574.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,949 | INFO     | mean y: 2474696.2486187844
[2025-06-04 22:15:18] 2025-06-04 20:15:03,949 | INFO     | -- intersect: 8422960092.904569
[2025-06-04 22:15:18] 2025-06-04 20:15:03,949 | INFO     | intersect: 8422960092.904569
[2025-06-04 22:15:18] 2025-06-04 20:15:03,950 | INFO     | chi2: 0.8244117589109569
[2025-06-04 22:15:18] 2025-06-04 20:15:03,950 | INFO     | current chi2=0.8244117589109569 (change=50.34618376096057 %)
[2025-06-04 22:15:18] 2025-06-04 20:15:03,950 | INFO     | sum of square deviations: 1690450300.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,951 | INFO     | sum of deviations: -5629044620.000001
[2025-06-04 22:15:18] 2025-06-04 20:15:03,951 | INFO     | mean x: 1749062726.5
[2025-06-04 22:15:18] 2025-06-04 20:15:03,951 | INFO     | mean y: 2471376.409090909
[2025-06-04 22:15:18] 2025-06-04 20:15:03,951 | INFO     | -- intersect: 5826690006.585535
[2025-06-04 22:15:18] 2025-06-04 20:15:03,952 | INFO     | intersect: 5826690006.585535
[2025-06-04 22:15:18] 2025-06-04 20:15:03,952 | INFO     | chi2: 0.7979225717750708
[2025-06-04 22:15:18] 2025-06-04 20:15:03,952 | INFO     | current chi2=0.7979225717750708 (change=3.21310156600364 %)
[2025-06-04 22:15:18] 2025-06-04 20:15:03,952 | INFO     | left removable region: 30
[2025-06-04 22:15:18] 2025-06-04 20:15:03,952 | INFO     | sum of square deviations: 1154663510.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,953 | INFO     | sum of deviations: 3366528206.9999995
[2025-06-04 22:15:18] 2025-06-04 20:15:03,953 | INFO     | mean x: 1749063001.0
[2025-06-04 22:15:18] 2025-06-04 20:15:03,953 | INFO     | mean y: 2486105.6193548385
[2025-06-04 22:15:18] 2025-06-04 20:15:03,953 | INFO     | -- intersect: -5097068767.026242
[2025-06-04 22:15:18] 2025-06-04 20:15:03,953 | INFO     | intersect: -5097068767.026242
[2025-06-04 22:15:18] 2025-06-04 20:15:03,954 | INFO     | chi2: 0.0001993054850074778
[2025-06-04 22:15:18] 2025-06-04 20:15:03,954 | INFO     | -- intersect: -5097068767.026242
[2025-06-04 22:15:18] 2025-06-04 20:15:03,954 | INFO     | current memory leak: 2.92 B/s (using 155 data points, chi2=0.00)
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | ..............................
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . Timing measurements:
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . get job = 0 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . initial setup = 11 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . payload setup = 156 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . stage-in = 0 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . payload execution = 11751 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . stage-out = 2 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | . log creation = 0 s
[2025-06-04 22:15:18] 2025-06-04 20:15:03,955 | INFO     | ..............................
[2025-06-04 22:15:18] 2025-06-04 20:15:04,175 | INFO     | 
[2025-06-04 22:15:18] 2025-06-04 20:15:04,175 | INFO     | job summary report
[2025-06-04 22:15:18] 2025-06-04 20:15:04,175 | INFO     | --------------------------------------------------
[2025-06-04 22:15:18] 2025-06-04 20:15:04,175 | INFO     | PanDA job id: 6678244376
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | task id: 45006595
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | errors: (none)
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | pilot state: finished 
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | transexitcode: 0
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | exeerrorcode: 0
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | exeerrordiag: 
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | exitcode: 0
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | exitmsg: OK
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | cpuconsumptiontime: 43502 s
[2025-06-04 22:15:18] 2025-06-04 20:15:04,176 | INFO     | nevents: 400
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | neventsw: 0
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | pid: 25931
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | pgrp: 25931
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | corecount: 8
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | event service: False
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | sizes: {0: 2396462, 1: 2397148, 2: 2397347, 12: 2397347, 23: 2397375, 34: 2397403, 45: 2397559, 55: 2397587, 66: 2397615, 77: 2397643, 79: 2397905, 87: 2398241, 11
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | --------------------------------------------------
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | 
[2025-06-04 22:15:18] 2025-06-04 20:15:04,177 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 22:15:18] 2025-06-04 20:15:04,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | job 6678244376 has completed (purged errors)
[2025-06-04 22:15:18] 2025-06-04 20:15:04,216 | INFO     | overall cleanup function is called
[2025-06-04 22:15:18] 2025-06-04 20:15:05,224 | INFO     | --- collectZombieJob: --- 10, [25931]
[2025-06-04 22:15:18] 2025-06-04 20:15:05,224 | INFO     | zombie collector waiting for pid 25931
[2025-06-04 22:15:18] 2025-06-04 20:15:05,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:15:18] 2025-06-04 20:15:05,225 | INFO     | collected zombie processes
[2025-06-04 22:15:18] 2025-06-04 20:15:05,225 | INFO     | will attempt to kill all subprocesses of pid=25931
[2025-06-04 22:15:18] 2025-06-04 20:15:05,346 | INFO     | process IDs to be killed: [25931] (in reverse order)
[2025-06-04 22:15:18] 2025-06-04 20:15:05,468 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:15:18] 2025-06-04 20:15:05,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:15:18] 2025-06-04 20:15:05,471 | INFO     | did not find any defunct processes belonging to 25931
[2025-06-04 22:15:18] 2025-06-04 20:15:05,474 | INFO     | did not find any defunct processes belonging to 25931
[2025-06-04 22:15:18] 2025-06-04 20:15:05,474 | INFO     | ready for new job
[2025-06-04 22:15:18] 2025-06-04 20:15:05,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:15:18] 2025-06-04 20:15:05,476 | INFO     | **************************************
[2025-06-04 22:15:18] 2025-06-04 20:15:05,476 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:15:18] 2025-06-04 20:15:05,477 | INFO     | **************************************
[2025-06-04 22:15:18] 2025-06-04 20:15:05,477 | INFO     | 
[2025-06-04 22:15:18] 2025-06-04 20:15:05,477 | INFO     | pilot is running in a VM
[2025-06-04 22:15:18] 2025-06-04 20:15:05,477 | INFO     | architecture information:
[2025-06-04 22:15:18] 2025-06-04 20:15:05,479 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:15:18] 2025-06-04 20:15:05,632 | INFO     | cat /etc/os-release:
[2025-06-04 22:15:18] NAME="CentOS Linux"
[2025-06-04 22:15:18] VERSION="7 (Core)"
[2025-06-04 22:15:18] ID="centos"
[2025-06-04 22:15:18] ID_LIKE="rhel fedora"
[2025-06-04 22:15:18] VERSION_ID="7"
[2025-06-04 22:15:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:15:18] ANSI_COLOR="0;31"
[2025-06-04 22:15:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:15:18] HOME_URL="https://www.centos.org/"
[2025-06-04 22:15:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:15:18] 
[2025-06-04 22:15:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:15:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:15:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:15:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:15:18] 
[2025-06-04 22:15:18] 2025-06-04 20:15:05,632 | INFO     | **************************************
[2025-06-04 22:15:18] 2025-06-04 20:15:06,135 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 22:15:18] 2025-06-04 20:15:06,190 | INFO     | sufficient remaining disk space (497390977024 B)
[2025-06-04 22:15:18] 2025-06-04 20:15:06,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:15:18] 2025-06-04 20:15:06,190 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:15:18] 2025-06-04 20:15:06,190 | INFO     | update_server=False
[2025-06-04 22:15:18] 2025-06-04 20:15:06,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:15:18] 2025-06-04 20:15:06,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:15:18] 2025-06-04 20:15:06,191 | INFO     | aborting loop
[2025-06-04 22:15:18] 2025-06-04 20:15:06,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:15:18] 2025-06-04 20:15:06,500 | INFO     | all payload control threads have been joined
[2025-06-04 22:15:18] 2025-06-04 20:15:06,878 | INFO     | PID=17318 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 22:15:18] 2025-06-04 20:15:06,879 | INFO     | .. there are 9 such processes running
[2025-06-04 22:15:18] 2025-06-04 20:15:06,879 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:15:18] 2025-06-04 20:15:06,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:15:18] 2025-06-04 20:15:06,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:15:18] 2025-06-04 20:15:07,195 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:07,197 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:07,204 | INFO     | all data control threads have been joined
[2025-06-04 22:15:18] 2025-06-04 20:15:07,229 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:07,308 | INFO     | all job control threads have been joined
[2025-06-04 22:15:18] 2025-06-04 20:15:07,491 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:07,506 | INFO     | [payload] control thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:07,524 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:07,866 | INFO     | [job] validate thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:15:18] 2025-06-04 20:15:08,199 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,210 | INFO     | [data] control thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,313 | INFO     | [job] control thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,364 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,505 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:08,610 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:09,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:15:18] 2025-06-04 20:15:10,089 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:12,154 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:15:18] 2025-06-04 20:15:12,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974749710144)>', '<ExcThread(monitor, started 139974166955776)>']
[2025-06-04 22:15:18] 2025-06-04 20:15:12,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:15:18] 2025-06-04 20:15:12,909 | INFO     | [monitor] control thread has ended
[2025-06-04 22:15:18] 2025-06-04 20:15:17,530 | INFO     | all workflow threads have been joined
[2025-06-04 22:15:18] 2025-06-04 20:15:17,530 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:15:18] 2025-06-04 20:15:17,531 | INFO     | traces error code: 0
[2025-06-04 22:15:18] 2025-06-04 20:15:17,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:15:18] 2025-06-04 20:15:17,821 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:15:18] 2025-06-04 20:15:17,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:15:18] 2025-06-04 20:15:17,944 [wrapper] pilotpid: 17318
[2025-06-04 22:15:18] 2025-06-04 20:15:18,036 [wrapper] Pilot exit status: 0
[2025-06-04 22:15:18] 2025-06-04 20:15:18,135 [wrapper] pandaids: 6678244376
[2025-06-04 22:15:18] 2025-06-04 20:15:18,174 [wrapper] cleanup supervisor_pilot 22090 17319
[2025-06-04 22:15:18] 2025-06-04 20:15:18,178 [wrapper] Test setup, not cleaning
[2025-06-04 22:15:18] 2025-06-04 20:15:18,195 [wrapper] apfmon messages muted
[2025-06-04 22:15:18] 2025-06-04 20:15:18,240 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:15:18] 2025-06-04 20:15:18,280 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:15:18]  *** Error codes and diagnostics ***
[2025-06-04 22:15:18]     "exeErrorCode": 0,
[2025-06-04 22:15:18]     "exeErrorDiag": "",
[2025-06-04 22:15:18]     "pilotErrorCode": 0,
[2025-06-04 22:15:18]     "pilotErrorDiag": "",
[2025-06-04 22:15:18]  *** Listing of results directory ***
[2025-06-04 22:15:18] total 387376
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 22:15:18] -rwx------. 1 boinc boinc     37140 Jun  4 02:48 runpilot2-wrapper.sh
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:48 queuedata.json
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:15:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:49 run_atlas
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:49 job.xml
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc      6392 Jun  4 18:49 init_data.xml
[2025-06-04 22:15:18] -rw-r--r--. 2 boinc boinc 214079264 Jun  4 18:49 EVNT.45006593._000542.pool.root.1
[2025-06-04 22:15:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:49 start_atlas.sh
[2025-06-04 22:15:18] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:49 shared
[2025-06-04 22:15:18] -rw-r--r--. 2 boinc boinc    508885 Jun  4 18:49 input.tar.gz
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:49 boinc_lockfile
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc      2524 Jun  4 18:50 pandaJob.out
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc    990984 Jun  4 18:53 agis_schedconf.cvmfs.json
[2025-06-04 22:15:18] drwx------. 4 boinc boinc      4096 Jun  4 18:53 pilot3
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc 175936858 Jun  4 22:13 HITS.45006595._049381.pool.root.1
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:14 boinc_task_state.xml
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc      1013 Jun  4 22:14 memory_monitor_summary.json
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc   1598969 Jun  4 22:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc    374318 Jun  4 22:14 log.45006595._049381.job.log.tgz.1
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc        95 Jun  4 22:14 pilot_heartbeat.json
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc      7688 Jun  4 22:15 heartbeat.json
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc      4809 Jun  4 22:15 pilotlog.txt
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc      8192 Jun  4 22:15 boinc_mmap_file
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc        28 Jun  4 22:15 wrapper_checkpoint.txt
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc   1044715 Jun  4 22:15 log.45006595._049381.job.log.1
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc       357 Jun  4 22:15 output.list
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:15 runtime_log
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc   1433600 Jun  4 22:15 result.tar.gz
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc       657 Jun  4 22:15 uBiMDmXUrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEPaKDmK8GAFn.diag
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc      8673 Jun  4 22:15 runtime_log.err
[2025-06-04 22:15:18] -rw-r--r--. 1 boinc boinc     20581 Jun  4 22:15 stderr.txt
[2025-06-04 22:15:18] HITS file was successfully produced:
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc 175936858 Jun  4 22:13 shared/HITS.pool.root.1
[2025-06-04 22:15:18]  *** Contents of shared directory: ***
[2025-06-04 22:15:18] total 382796
[2025-06-04 22:15:18] -rw-r--r--. 2 boinc boinc 214079264 Jun  4 18:49 ATLAS.root_0
[2025-06-04 22:15:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:49 start_atlas.sh
[2025-06-04 22:15:18] -rw-r--r--. 2 boinc boinc    508885 Jun  4 18:49 input.tar.gz
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc 175936858 Jun  4 22:13 HITS.pool.root.1
[2025-06-04 22:15:18] -rw-------. 1 boinc boinc   1433600 Jun  4 22:15 result.tar.gz
22:15:20 (12793): run_atlas exited; CPU time 43656.200592
22:15:20 (12793): called boinc_finish(0)

</stderr_txt>
]]>

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